70 |
|
|
71 |
|
// group bookkeeping |
72 |
|
groupCutoffs getGroupCutoffs(int cg1, int cg2); |
73 |
+ |
Vector3d getGroupVelocityColumn(int cg2); |
74 |
|
|
75 |
|
// Group->atom bookkeeping |
76 |
|
vector<int> getAtomsInGroupRow(int cg1); |
92 |
|
bool excludeAtomPair(int atom1, int atom2); |
93 |
|
void addForceToAtomRow(int atom1, Vector3d fg); |
94 |
|
void addForceToAtomColumn(int atom2, Vector3d fg); |
95 |
+ |
Vector3d getAtomVelocityColumn(int atom2); |
96 |
|
|
97 |
|
// filling interaction blocks with pointers |
98 |
|
void fillInteractionData(InteractionData &idat, int atom1, int atom2); |
109 |
|
vector<int> groupToGtype; |
110 |
|
|
111 |
|
#ifdef IS_MPI |
112 |
< |
DataStorage atomRowData; |
111 |
< |
DataStorage atomColData; |
112 |
> |
DataStorage atomRowData; DataStorage atomColData; |
113 |
|
DataStorage cgRowData; |
114 |
|
DataStorage cgColData; |
115 |
|
|