Took out a spurious debugging line
Fixes for restraints, renaming of UniformField
Fixes to deal with deprecation of MPI C++ bindings. We've reverted back to the C calls.
Some MPI include re-ordering to work with the Intel MPI implementation.
MERGE OpenMD development 1783:1878 into trunk
Updating MPI calls to C++, fixing a DumpWriter bug, cleaning cruft
MERGE OpenMD development branch 1465:1781 into trunk
Adding property set to svn entries
Fixed bugs in Restraint, refactored RestReader and RestWriter
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
Bug fixes in the SelectionEvaluator and SelectionCompiler Added print option in Restraints
Added new restraint infrastructure Added MolecularRestraints Added ObjectRestraints Added RestraintStamp Updated thermodynamic integration to use ObjectRestraints Added Quaternion mathematics for twist swing decompositions Significantly updated RestWriter and RestReader to use dump-like files Added selections for x, y, and z coordinates of atoms Removed monolithic Restraints class Fixed a few bugs in gradients of Euler angles in DirectionalAtom and RigidBody Added some rotational capabilities to prinicpalAxisCalculator
fixed TI MPI bug
MPI thermodynamic integration works now.
fixes for mpi thermodynamic integration, close to fully working...
Adding single precision capabilities to c++ side
xemacs has been drafted to perform our indentation services
Oops... MPI now builds...
First commit of the new restraints code
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