Massive changes preparing for release of OOPSE-4: The main difference is that the new MD file format (.md, .dump, .eor) now contains meta-data information along with the configuration information.
Added simulation box dipole moment accumulation for the purposes of calculating dielectric constants
Adding single precision capabilities to c++ side
Adding spherical boundary conditions to LD integrator
remove a unknown method
refactor Hydrodynamics module.
LangevinDynamics in progress
Removed MixingRule from Globals. Handled by forceField now.
End of the Link --> List Return of the Oject-Oriented replace yacc/lex parser with antlr parser
OptionSectionParser get compiled
ForceField optional parameters....
added in a 5th order polynomial switching function option
Added a keyword and ability to output forces and torques
improvements in shifted-force
changing how we deal with summation and screening methods
fix some namespace issues in Globals
fix a seg fault when try copy a string to event's err_msg, there are still tons of memory leaking problem in Globals
Change error message in Globals
rewrite Globals
Added support for skinThickness keyword to Globals.
Added keywords for compressed dump files.
some fixes but even more breaking (cutting out the old way to do reaction field)
changes to include the coulombicCorrection selector
adding c-side interface to change cutoff Policy
made some changes for implementing the wolf potential
adding keyword printPressureTensor
NPAT is working
adding NPAT and NPrT integrators
xemacs has been drafted to perform our indentation services
LinkedList removal project starts now
using map to replace link list
First commit of the new restraints code
(1) complete section parser's error message (2) add GhostTorsion (3) accumulate inertial tensor from the directional atoms before calculate rigidbody's inertial tensor
merging new_design branch into OOPSE-2.0
change the #include in source files
Import of OOPSE v. 2.0
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