1 |
gezelter |
507 |
/* |
2 |
gezelter |
246 |
* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. |
3 |
|
|
* |
4 |
|
|
* The University of Notre Dame grants you ("Licensee") a |
5 |
|
|
* non-exclusive, royalty free, license to use, modify and |
6 |
|
|
* redistribute this software in source and binary code form, provided |
7 |
|
|
* that the following conditions are met: |
8 |
|
|
* |
9 |
gezelter |
1390 |
* 1. Redistributions of source code must retain the above copyright |
10 |
gezelter |
246 |
* notice, this list of conditions and the following disclaimer. |
11 |
|
|
* |
12 |
gezelter |
1390 |
* 2. Redistributions in binary form must reproduce the above copyright |
13 |
gezelter |
246 |
* notice, this list of conditions and the following disclaimer in the |
14 |
|
|
* documentation and/or other materials provided with the |
15 |
|
|
* distribution. |
16 |
|
|
* |
17 |
|
|
* This software is provided "AS IS," without a warranty of any |
18 |
|
|
* kind. All express or implied conditions, representations and |
19 |
|
|
* warranties, including any implied warranty of merchantability, |
20 |
|
|
* fitness for a particular purpose or non-infringement, are hereby |
21 |
|
|
* excluded. The University of Notre Dame and its licensors shall not |
22 |
|
|
* be liable for any damages suffered by licensee as a result of |
23 |
|
|
* using, modifying or distributing the software or its |
24 |
|
|
* derivatives. In no event will the University of Notre Dame or its |
25 |
|
|
* licensors be liable for any lost revenue, profit or data, or for |
26 |
|
|
* direct, indirect, special, consequential, incidental or punitive |
27 |
|
|
* damages, however caused and regardless of the theory of liability, |
28 |
|
|
* arising out of the use of or inability to use software, even if the |
29 |
|
|
* University of Notre Dame has been advised of the possibility of |
30 |
|
|
* such damages. |
31 |
gezelter |
1390 |
* |
32 |
|
|
* SUPPORT OPEN SCIENCE! If you use OpenMD or its source code in your |
33 |
|
|
* research, please cite the appropriate papers when you publish your |
34 |
|
|
* work. Good starting points are: |
35 |
|
|
* |
36 |
|
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
37 |
|
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
38 |
|
|
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
39 |
gezelter |
1782 |
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
40 |
|
|
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
41 |
gezelter |
246 |
*/ |
42 |
|
|
|
43 |
|
|
#include "brains/Register.hpp" |
44 |
|
|
|
45 |
|
|
#include "integrators/IntegratorFactory.hpp" |
46 |
|
|
#include "integrators/IntegratorCreator.hpp" |
47 |
|
|
#include "integrators/Integrator.hpp" |
48 |
|
|
#include "integrators/NVE.hpp" |
49 |
|
|
#include "integrators/NVT.hpp" |
50 |
|
|
#include "integrators/NPTi.hpp" |
51 |
|
|
#include "integrators/NPTf.hpp" |
52 |
|
|
#include "integrators/NPTxyz.hpp" |
53 |
gezelter |
1519 |
#include "integrators/NPTsz.hpp" |
54 |
tim |
536 |
#include "integrators/NPAT.hpp" |
55 |
|
|
#include "integrators/NPrT.hpp" |
56 |
gezelter |
1032 |
#include "integrators/NgammaT.hpp" |
57 |
tim |
895 |
#include "integrators/LangevinDynamics.hpp" |
58 |
skuang |
1297 |
#if defined(HAVE_QHULL) |
59 |
kstocke1 |
1526 |
#include "integrators/LangevinHullDynamics.hpp" |
60 |
skuang |
1297 |
#endif |
61 |
tim |
536 |
|
62 |
gezelter |
1782 |
#include "optimization/OptimizationFactory.hpp" |
63 |
|
|
#include "optimization/OptimizationCreator.hpp" |
64 |
|
|
#include "optimization/Method.hpp" |
65 |
|
|
#include "optimization/SteepestDescent.hpp" |
66 |
|
|
#include "optimization/ConjugateGradient.hpp" |
67 |
|
|
#include "optimization/BFGS.hpp" |
68 |
|
|
|
69 |
tim |
484 |
#include "lattice/LatticeFactory.hpp" |
70 |
|
|
#include "lattice/LatticeCreator.hpp" |
71 |
tim |
487 |
#include "lattice/FCCLattice.hpp" |
72 |
gezelter |
246 |
|
73 |
gezelter |
1782 |
using namespace QuantLib; |
74 |
gezelter |
1390 |
namespace OpenMD { |
75 |
gezelter |
246 |
|
76 |
gezelter |
507 |
void registerIntegrators() { |
77 |
gezelter |
246 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NVE>("NVE")); |
78 |
|
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NVT>("NVT")); |
79 |
chrisfen |
705 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPTi>("NPTI")); |
80 |
|
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPTf>("NPTF")); |
81 |
|
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPTxyz>("NPTXYZ")); |
82 |
tim |
536 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPAT>("NPAT")); |
83 |
chrisfen |
705 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPrT>("NPRT")); |
84 |
gezelter |
945 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPrT>("NPGT")); |
85 |
gezelter |
1032 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NgammaT>("NGT")); |
86 |
|
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NgammaT>("NGAMMAT")); |
87 |
tim |
895 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinDynamics>("LANGEVINDYNAMICS")); |
88 |
gezelter |
945 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinDynamics>("LD")); |
89 |
skuang |
1297 |
#if defined(HAVE_QHULL) |
90 |
kstocke1 |
1526 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinHullDynamics>("LHULL")); |
91 |
|
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinHullDynamics>("LANGEVINHULL")); |
92 |
kstocke1 |
1557 |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinHullDynamics>("SMIPD")); |
93 |
skuang |
1297 |
#endif |
94 |
gezelter |
507 |
} |
95 |
gezelter |
246 |
|
96 |
gezelter |
1782 |
void registerOptimizers() { |
97 |
|
|
OptimizationFactory::getInstance()->registerOptimization(new OptimizationBuilder<QuantLib::SteepestDescent>("SD")); |
98 |
|
|
OptimizationFactory::getInstance()->registerOptimization(new OptimizationBuilder<QuantLib::ConjugateGradient>("CG")); |
99 |
|
|
OptimizationFactory::getInstance()->registerOptimization(new OptimizationBuilder<QuantLib::BFGS>("BFGS")); |
100 |
gezelter |
507 |
} |
101 |
gezelter |
246 |
|
102 |
gezelter |
507 |
void registerLattice(){ |
103 |
tim |
484 |
LatticeFactory::getInstance()->registerLattice(new LatticeBuilder<FCCLattice>("FCC")); |
104 |
gezelter |
507 |
} |
105 |
tim |
484 |
|
106 |
gezelter |
507 |
void registerAll() { |
107 |
gezelter |
246 |
registerIntegrators(); |
108 |
gezelter |
1782 |
registerOptimizers(); |
109 |
gezelter |
507 |
} |
110 |
gezelter |
246 |
|
111 |
|
|
} |