--- trunk/src/applications/staticProps/StaticPropsCmd.h	2011/06/19 17:51:15	1585
+++ trunk/src/applications/staticProps/StaticPropsCmd.h	2014/04/23 20:34:17	1991
@@ -93,6 +93,12 @@ struct gengetopt_args_info
   char * comsele_arg;	/**< @brief select stunt doubles for center-of-mass reference point.  */
   char * comsele_orig;	/**< @brief select stunt doubles for center-of-mass reference point original value given at command line.  */
   const char *comsele_help; /**< @brief select stunt doubles for center-of-mass reference point help description.  */
+  int seleoffset_arg;	/**< @brief global index offset for a second object (used to define a vector between sites in molecule).  */
+  char * seleoffset_orig;	/**< @brief global index offset for a second object (used to define a vector between sites in molecule) original value given at command line.  */
+  const char *seleoffset_help; /**< @brief global index offset for a second object (used to define a vector between sites in molecule) help description.  */
+  int seleoffset2_arg;	/**< @brief global index offset for a third object (used to define a vector between sites in molecule).  */
+  char * seleoffset2_orig;	/**< @brief global index offset for a third object (used to define a vector between sites in molecule) original value given at command line.  */
+  const char *seleoffset2_help; /**< @brief global index offset for a third object (used to define a vector between sites in molecule) help description.  */
   char * molname_arg;	/**< @brief molecule name.  */
   char * molname_orig;	/**< @brief molecule name original value given at command line.  */
   const char *molname_help; /**< @brief molecule name help description.  */
@@ -122,13 +128,17 @@ struct gengetopt_args_info
   const char *scd_help; /**< @brief scd order parameter (either --sele1, --sele2, --sele3 are specified or --molname, --begin, --end are specified) help description.  */
   const char *density_help; /**< @brief density plot help description.  */
   const char *slab_density_help; /**< @brief slab density help description.  */
-  const char *p_angle_help; /**< @brief p(cos(theta)) help description.  */
+  const char *p_angle_help; /**< @brief p(cos(theta)) (--sele1 must be specified, --sele2 is optional) help description.  */
   const char *hxy_help; /**< @brief hxy help description.  */
   const char *rho_r_help; /**< @brief rho of R help description.  */
   const char *angle_r_help; /**< @brief angle of R help description.  */
   const char *hullvol_help; /**< @brief hull volume of nanoparticle help description.  */
   const char *rodlength_help; /**< @brief length of nanorod help description.  */
-  const char *tet_param_help; /**< @brief tetrahedrality order parameter help description.  */
+  const char *tet_param_help; /**< @brief tetrahedrality order parameter (Qk) help description.  */
+  const char *tet_param_z_help; /**< @brief spatially-resolved tetrahedrality order parameter Qk(z) help description.  */
+  const char *rnemdz_help; /**< @brief slab-resolved RNEMD statistics (temperature, density, velocity) help description.  */
+  const char *rnemdr_help; /**< @brief shell-resolved RNEMD statistics (temperature, density, angular velocity) help description.  */
+  const char *rnemdrt_help; /**< @brief shell and angle-resolved RNEMD statistics (temperature, density, angular velocity) help description.  */
   
   unsigned int help_given ;	/**< @brief Whether help was given.  */
   unsigned int version_given ;	/**< @brief Whether version was given.  */
@@ -150,6 +160,8 @@ struct gengetopt_args_info
   unsigned int sele3_given ;	/**< @brief Whether sele3 was given.  */
   unsigned int refsele_given ;	/**< @brief Whether refsele was given.  */
   unsigned int comsele_given ;	/**< @brief Whether comsele was given.  */
+  unsigned int seleoffset_given ;	/**< @brief Whether seleoffset was given.  */
+  unsigned int seleoffset2_given ;	/**< @brief Whether seleoffset2 was given.  */
   unsigned int molname_given ;	/**< @brief Whether molname was given.  */
   unsigned int begin_given ;	/**< @brief Whether begin was given.  */
   unsigned int end_given ;	/**< @brief Whether end was given.  */
@@ -178,6 +190,10 @@ struct gengetopt_args_info
   unsigned int hullvol_given ;	/**< @brief Whether hullvol was given.  */
   unsigned int rodlength_given ;	/**< @brief Whether rodlength was given.  */
   unsigned int tet_param_given ;	/**< @brief Whether tet_param was given.  */
+  unsigned int tet_param_z_given ;	/**< @brief Whether tet_param_z was given.  */
+  unsigned int rnemdz_given ;	/**< @brief Whether rnemdz was given.  */
+  unsigned int rnemdr_given ;	/**< @brief Whether rnemdr was given.  */
+  unsigned int rnemdrt_given ;	/**< @brief Whether rnemdrt was given.  */
 
   char **inputs ; /**< @brief unamed options (options without names) */
   unsigned inputs_num ; /**< @brief unamed options number */