1 |
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/* |
2 |
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File autogenerated by gengetopt version 2.22 |
3 |
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generated with the following command: |
4 |
< |
gengetopt -F StaticPropsCmd -u |
4 |
> |
gengetopt -F StaticPropsCmd |
5 |
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6 |
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The developers of gengetopt consider the fixed text that goes in all |
7 |
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gengetopt output files to be in the public domain: |
23 |
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24 |
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const char *gengetopt_args_info_purpose = ""; |
25 |
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|
26 |
< |
const char *gengetopt_args_info_usage = "Usage: StaticProps [OPTIONS]... [FILES]..."; |
26 |
> |
const char *gengetopt_args_info_usage = "Usage: StaticProps [OPTIONS]..."; |
27 |
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|
28 |
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const char *gengetopt_args_info_description = ""; |
29 |
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|
38 |
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" -y, --nbins_y=INT number of bins in y axis (default=`100')", |
39 |
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" --nbins_z=INT number of bins in z axis (default=`100')", |
40 |
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" -a, --nanglebins=INT number of bins for cos(angle) (default=`50')", |
41 |
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" --length=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)", |
41 |
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" -c, --rcut=DOUBLE cutoff radius (rcut)", |
42 |
+ |
" --length=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)", |
43 |
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" --zlength=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)", |
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" -z, --zoffset=DOUBLE Where to set the zero for the slab_density \n calculation (default=`0')", |
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" --sele1=selection script select the first stuntdouble set", |
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" --sele2=selection script select the second stuntdouble set", |
108 |
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args_info->nbins_y_given = 0 ; |
109 |
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args_info->nbins_z_given = 0 ; |
110 |
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args_info->nanglebins_given = 0 ; |
110 |
– |
args_info->length_given = 0 ; |
111 |
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args_info->rcut_given = 0 ; |
112 |
+ |
args_info->length_given = 0 ; |
113 |
+ |
args_info->zlength_given = 0 ; |
114 |
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args_info->zoffset_given = 0 ; |
115 |
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args_info->sele1_given = 0 ; |
116 |
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args_info->sele2_given = 0 ; |
162 |
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args_info->nbins_z_orig = NULL; |
163 |
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args_info->nanglebins_arg = 50; |
164 |
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args_info->nanglebins_orig = NULL; |
163 |
– |
args_info->length_orig = NULL; |
165 |
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args_info->rcut_orig = NULL; |
166 |
+ |
args_info->length_orig = NULL; |
167 |
+ |
args_info->zlength_orig = NULL; |
168 |
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args_info->zoffset_arg = 0; |
169 |
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args_info->zoffset_orig = NULL; |
170 |
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args_info->sele1_arg = NULL; |
200 |
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args_info->nbins_y_help = gengetopt_args_info_help[7] ; |
201 |
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args_info->nbins_z_help = gengetopt_args_info_help[8] ; |
202 |
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args_info->nanglebins_help = gengetopt_args_info_help[9] ; |
203 |
< |
args_info->length_help = gengetopt_args_info_help[10] ; |
204 |
< |
args_info->rcut_help = gengetopt_args_info_help[11] ; |
205 |
< |
args_info->zoffset_help = gengetopt_args_info_help[12] ; |
206 |
< |
args_info->sele1_help = gengetopt_args_info_help[13] ; |
207 |
< |
args_info->sele2_help = gengetopt_args_info_help[14] ; |
208 |
< |
args_info->sele3_help = gengetopt_args_info_help[15] ; |
209 |
< |
args_info->refsele_help = gengetopt_args_info_help[16] ; |
210 |
< |
args_info->comsele_help = gengetopt_args_info_help[17] ; |
211 |
< |
args_info->molname_help = gengetopt_args_info_help[18] ; |
212 |
< |
args_info->begin_help = gengetopt_args_info_help[19] ; |
213 |
< |
args_info->end_help = gengetopt_args_info_help[20] ; |
214 |
< |
args_info->radius_help = gengetopt_args_info_help[21] ; |
215 |
< |
args_info->bo_help = gengetopt_args_info_help[23] ; |
216 |
< |
args_info->bor_help = gengetopt_args_info_help[24] ; |
217 |
< |
args_info->bad_help = gengetopt_args_info_help[25] ; |
218 |
< |
args_info->gofr_help = gengetopt_args_info_help[26] ; |
219 |
< |
args_info->gofz_help = gengetopt_args_info_help[27] ; |
220 |
< |
args_info->r_theta_help = gengetopt_args_info_help[28] ; |
221 |
< |
args_info->r_omega_help = gengetopt_args_info_help[29] ; |
222 |
< |
args_info->r_z_help = gengetopt_args_info_help[30] ; |
223 |
< |
args_info->theta_omega_help = gengetopt_args_info_help[31] ; |
224 |
< |
args_info->gxyz_help = gengetopt_args_info_help[32] ; |
225 |
< |
args_info->p2_help = gengetopt_args_info_help[33] ; |
226 |
< |
args_info->rp2_help = gengetopt_args_info_help[34] ; |
227 |
< |
args_info->scd_help = gengetopt_args_info_help[35] ; |
228 |
< |
args_info->density_help = gengetopt_args_info_help[36] ; |
229 |
< |
args_info->slab_density_help = gengetopt_args_info_help[37] ; |
230 |
< |
args_info->p_angle_help = gengetopt_args_info_help[38] ; |
231 |
< |
args_info->hxy_help = gengetopt_args_info_help[39] ; |
232 |
< |
args_info->rho_r_help = gengetopt_args_info_help[40] ; |
233 |
< |
args_info->hullvol_help = gengetopt_args_info_help[41] ; |
203 |
> |
args_info->rcut_help = gengetopt_args_info_help[10] ; |
204 |
> |
args_info->length_help = gengetopt_args_info_help[11] ; |
205 |
> |
args_info->zlength_help = gengetopt_args_info_help[12] ; |
206 |
> |
args_info->zoffset_help = gengetopt_args_info_help[13] ; |
207 |
> |
args_info->sele1_help = gengetopt_args_info_help[14] ; |
208 |
> |
args_info->sele2_help = gengetopt_args_info_help[15] ; |
209 |
> |
args_info->sele3_help = gengetopt_args_info_help[16] ; |
210 |
> |
args_info->refsele_help = gengetopt_args_info_help[17] ; |
211 |
> |
args_info->comsele_help = gengetopt_args_info_help[18] ; |
212 |
> |
args_info->molname_help = gengetopt_args_info_help[19] ; |
213 |
> |
args_info->begin_help = gengetopt_args_info_help[20] ; |
214 |
> |
args_info->end_help = gengetopt_args_info_help[21] ; |
215 |
> |
args_info->radius_help = gengetopt_args_info_help[22] ; |
216 |
> |
args_info->bo_help = gengetopt_args_info_help[24] ; |
217 |
> |
args_info->bor_help = gengetopt_args_info_help[25] ; |
218 |
> |
args_info->bad_help = gengetopt_args_info_help[26] ; |
219 |
> |
args_info->gofr_help = gengetopt_args_info_help[27] ; |
220 |
> |
args_info->gofz_help = gengetopt_args_info_help[28] ; |
221 |
> |
args_info->r_theta_help = gengetopt_args_info_help[29] ; |
222 |
> |
args_info->r_omega_help = gengetopt_args_info_help[30] ; |
223 |
> |
args_info->r_z_help = gengetopt_args_info_help[31] ; |
224 |
> |
args_info->theta_omega_help = gengetopt_args_info_help[32] ; |
225 |
> |
args_info->gxyz_help = gengetopt_args_info_help[33] ; |
226 |
> |
args_info->p2_help = gengetopt_args_info_help[34] ; |
227 |
> |
args_info->rp2_help = gengetopt_args_info_help[35] ; |
228 |
> |
args_info->scd_help = gengetopt_args_info_help[36] ; |
229 |
> |
args_info->density_help = gengetopt_args_info_help[37] ; |
230 |
> |
args_info->slab_density_help = gengetopt_args_info_help[38] ; |
231 |
> |
args_info->p_angle_help = gengetopt_args_info_help[39] ; |
232 |
> |
args_info->hxy_help = gengetopt_args_info_help[40] ; |
233 |
> |
args_info->rho_r_help = gengetopt_args_info_help[41] ; |
234 |
> |
args_info->hullvol_help = gengetopt_args_info_help[42] ; |
235 |
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|
236 |
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} |
237 |
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271 |
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clear_given (args_info); |
272 |
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clear_args (args_info); |
273 |
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init_args_info (args_info); |
270 |
– |
|
271 |
– |
args_info->inputs = NULL; |
272 |
– |
args_info->inputs_num = 0; |
274 |
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} |
275 |
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|
276 |
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void |
309 |
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static void |
310 |
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cmdline_parser_release (struct gengetopt_args_info *args_info) |
311 |
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{ |
312 |
< |
unsigned int i; |
312 |
> |
|
313 |
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free_string_field (&(args_info->input_arg)); |
314 |
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free_string_field (&(args_info->input_orig)); |
315 |
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free_string_field (&(args_info->output_arg)); |
320 |
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free_string_field (&(args_info->nbins_y_orig)); |
321 |
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free_string_field (&(args_info->nbins_z_orig)); |
322 |
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free_string_field (&(args_info->nanglebins_orig)); |
322 |
– |
free_string_field (&(args_info->length_orig)); |
323 |
|
free_string_field (&(args_info->rcut_orig)); |
324 |
+ |
free_string_field (&(args_info->length_orig)); |
325 |
+ |
free_string_field (&(args_info->zlength_orig)); |
326 |
|
free_string_field (&(args_info->zoffset_orig)); |
327 |
|
free_string_field (&(args_info->sele1_arg)); |
328 |
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free_string_field (&(args_info->sele1_orig)); |
341 |
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free_string_field (&(args_info->radius_orig)); |
342 |
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|
343 |
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|
342 |
– |
for (i = 0; i < args_info->inputs_num; ++i) |
343 |
– |
free (args_info->inputs [i]); |
344 |
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|
345 |
– |
if (args_info->inputs_num) |
346 |
– |
free (args_info->inputs); |
347 |
– |
|
345 |
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clear_given (args_info); |
346 |
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} |
347 |
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|
388 |
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write_into_file(outfile, "nbins_z", args_info->nbins_z_orig, 0); |
389 |
|
if (args_info->nanglebins_given) |
390 |
|
write_into_file(outfile, "nanglebins", args_info->nanglebins_orig, 0); |
394 |
– |
if (args_info->length_given) |
395 |
– |
write_into_file(outfile, "length", args_info->length_orig, 0); |
391 |
|
if (args_info->rcut_given) |
392 |
|
write_into_file(outfile, "rcut", args_info->rcut_orig, 0); |
393 |
+ |
if (args_info->length_given) |
394 |
+ |
write_into_file(outfile, "length", args_info->length_orig, 0); |
395 |
+ |
if (args_info->zlength_given) |
396 |
+ |
write_into_file(outfile, "zlength", args_info->zlength_orig, 0); |
397 |
|
if (args_info->zoffset_given) |
398 |
|
write_into_file(outfile, "zoffset", args_info->zoffset_orig, 0); |
399 |
|
if (args_info->sele1_given) |
774 |
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{ "nbins_y", 1, NULL, 'y' }, |
775 |
|
{ "nbins_z", 1, NULL, 0 }, |
776 |
|
{ "nanglebins", 1, NULL, 'a' }, |
778 |
– |
{ "length", 1, NULL, 0 }, |
777 |
|
{ "rcut", 1, NULL, 'c' }, |
778 |
+ |
{ "length", 1, NULL, 0 }, |
779 |
+ |
{ "zlength", 1, NULL, 0 }, |
780 |
|
{ "zoffset", 1, NULL, 'z' }, |
781 |
|
{ "sele1", 1, NULL, 0 }, |
782 |
|
{ "sele2", 1, NULL, 0 }, |
1023 |
|
goto failure; |
1024 |
|
|
1025 |
|
} |
1026 |
+ |
/* maximum length (Defaults to 1/2 smallest length of first frame). */ |
1027 |
+ |
else if (strcmp (long_options[option_index].name, "zlength") == 0) |
1028 |
+ |
{ |
1029 |
+ |
|
1030 |
+ |
|
1031 |
+ |
if (update_arg( (void *)&(args_info->zlength_arg), |
1032 |
+ |
&(args_info->zlength_orig), &(args_info->zlength_given), |
1033 |
+ |
&(local_args_info.zlength_given), optarg, 0, 0, ARG_DOUBLE, |
1034 |
+ |
check_ambiguity, override, 0, 0, |
1035 |
+ |
"zlength", '-', |
1036 |
+ |
additional_error)) |
1037 |
+ |
goto failure; |
1038 |
+ |
|
1039 |
+ |
} |
1040 |
|
/* select the first stuntdouble set. */ |
1041 |
|
else if (strcmp (long_options[option_index].name, "sele1") == 0) |
1042 |
|
{ |
1448 |
|
if ( error ) |
1449 |
|
return (EXIT_FAILURE); |
1450 |
|
|
1437 |
– |
if (optind < argc) |
1438 |
– |
{ |
1439 |
– |
int i = 0 ; |
1440 |
– |
int found_prog_name = 0; |
1441 |
– |
/* whether program name, i.e., argv[0], is in the remaining args |
1442 |
– |
(this may happen with some implementations of getopt, |
1443 |
– |
but surely not with the one included by gengetopt) */ |
1444 |
– |
|
1445 |
– |
i = optind; |
1446 |
– |
while (i < argc) |
1447 |
– |
if (argv[i++] == argv[0]) { |
1448 |
– |
found_prog_name = 1; |
1449 |
– |
break; |
1450 |
– |
} |
1451 |
– |
i = 0; |
1452 |
– |
|
1453 |
– |
args_info->inputs_num = argc - optind - found_prog_name; |
1454 |
– |
args_info->inputs = |
1455 |
– |
(char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ; |
1456 |
– |
while (optind < argc) |
1457 |
– |
if (argv[optind++] != argv[0]) |
1458 |
– |
args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind-1]) ; |
1459 |
– |
} |
1460 |
– |
|
1451 |
|
return 0; |
1452 |
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|
1453 |
|
failure: |