92 |
|
" --rnemdz slab-resolved RNEMD statistics (temperature, \n density, velocity)", |
93 |
|
" --rnemdr shell-resolved RNEMD statistics (temperature, \n density, angular velocity)", |
94 |
|
" --rnemdrt shell and angle-resolved RNEMD statistics \n (temperature, density, angular velocity)", |
95 |
< |
" --uFreqMap electrostatic potential to frequency map based \n on the Cho nitrile fits", |
95 |
> |
" --nitrile electrostatic potential to frequency map based \n on the Cho nitrile fits", |
96 |
|
0 |
97 |
|
}; |
98 |
|
|
175 |
|
args_info->rnemdz_given = 0 ; |
176 |
|
args_info->rnemdr_given = 0 ; |
177 |
|
args_info->rnemdrt_given = 0 ; |
178 |
< |
args_info->uFreqMap_given = 0 ; |
178 |
> |
args_info->nitrile_given = 0 ; |
179 |
|
args_info->staticProps_group_counter = 0 ; |
180 |
|
} |
181 |
|
|
285 |
|
args_info->rnemdz_help = gengetopt_args_info_help[53] ; |
286 |
|
args_info->rnemdr_help = gengetopt_args_info_help[54] ; |
287 |
|
args_info->rnemdrt_help = gengetopt_args_info_help[55] ; |
288 |
< |
args_info->uFreqMap_help = gengetopt_args_info_help[56] ; |
288 |
> |
args_info->nitrile_help = gengetopt_args_info_help[56] ; |
289 |
|
|
290 |
|
} |
291 |
|
|
546 |
|
write_into_file(outfile, "rnemdr", 0, 0 ); |
547 |
|
if (args_info->rnemdrt_given) |
548 |
|
write_into_file(outfile, "rnemdrt", 0, 0 ); |
549 |
< |
if (args_info->uFreqMap_given) |
550 |
< |
write_into_file(outfile, "uFreqMap", 0, 0 ); |
549 |
> |
if (args_info->nitrile_given) |
550 |
> |
write_into_file(outfile, "nitrile", 0, 0 ); |
551 |
|
|
552 |
|
|
553 |
|
i = EXIT_SUCCESS; |
630 |
|
args_info->rnemdz_given = 0 ; |
631 |
|
args_info->rnemdr_given = 0 ; |
632 |
|
args_info->rnemdrt_given = 0 ; |
633 |
< |
args_info->uFreqMap_given = 0 ; |
633 |
> |
args_info->nitrile_given = 0 ; |
634 |
|
|
635 |
|
args_info->staticProps_group_counter = 0; |
636 |
|
} |
931 |
|
{ "rnemdz", 0, NULL, 0 }, |
932 |
|
{ "rnemdr", 0, NULL, 0 }, |
933 |
|
{ "rnemdrt", 0, NULL, 0 }, |
934 |
< |
{ "uFreqMap", 0, NULL, 0 }, |
934 |
> |
{ "nitrile", 0, NULL, 0 }, |
935 |
|
{ 0, 0, 0, 0 } |
936 |
|
}; |
937 |
|
|
1755 |
|
|
1756 |
|
} |
1757 |
|
/* electrostatic potential to frequency map based on the Cho nitrile fits. */ |
1758 |
< |
else if (strcmp (long_options[option_index].name, "uFreqMap") == 0) |
1758 |
> |
else if (strcmp (long_options[option_index].name, "nitrile") == 0) |
1759 |
|
{ |
1760 |
|
|
1761 |
|
if (args_info->staticProps_group_counter && override) |
1763 |
|
args_info->staticProps_group_counter += 1; |
1764 |
|
|
1765 |
|
if (update_arg( 0 , |
1766 |
< |
0 , &(args_info->uFreqMap_given), |
1767 |
< |
&(local_args_info.uFreqMap_given), optarg, 0, 0, ARG_NO, |
1766 |
> |
0 , &(args_info->nitrile_given), |
1767 |
> |
&(local_args_info.nitrile_given), optarg, 0, 0, ARG_NO, |
1768 |
|
check_ambiguity, override, 0, 0, |
1769 |
< |
"uFreqMap", '-', |
1769 |
> |
"nitrile", '-', |
1770 |
|
additional_error)) |
1771 |
|
goto failure; |
1772 |
|
|