applications/sequentialProps/SequentialPropsCmd.h

/** @file SequentialPropsCmd.h
 *  @brief The header file for the command line option parser
 *  generated by GNU Gengetopt version 2.22.4
 *  http://www.gnu.org/software/gengetopt.
 *  DO NOT modify this file, since it can be overwritten
 *  @author GNU Gengetopt by Lorenzo Bettini */

#ifndef SEQUENTIALPROPSCMD_H
#define SEQUENTIALPROPSCMD_H

/* If we use autoconf.  */
#ifdef HAVE_CONFIG_H
#include "config.h"
#endif

#include <stdio.h> /* for FILE */

#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */

#ifndef CMDLINE_PARSER_PACKAGE
/** @brief the program name (used for printing errors) */
#define CMDLINE_PARSER_PACKAGE "SequentialProps"
#endif

#ifndef CMDLINE_PARSER_PACKAGE_NAME
/** @brief the complete program name (used for help and version) */
#define CMDLINE_PARSER_PACKAGE_NAME "SequentialProps"
#endif

#ifndef CMDLINE_PARSER_VERSION
/** @brief the program version */
#define CMDLINE_PARSER_VERSION "1.00"
#endif

/** @brief Where the command line options are stored */
struct gengetopt_args_info
{
  const char *help_help; /**< @brief Print help and exit help description.  */
  const char *version_help; /**< @brief Print version and exit help description.  */
  char * input_arg;     /**< @brief input dump file.  */
  char * input_orig;    /**< @brief input dump file original value given at command line.  */
  const char *input_help; /**< @brief input dump file help description.  */
  char * output_arg;    /**< @brief output file name.  */
  char * output_orig;   /**< @brief output file name original value given at command line.  */
  const char *output_help; /**< @brief output file name help description.  */
  char * sele1_arg;     /**< @brief select first stuntdouble set.  */
  char * sele1_orig;    /**< @brief select first stuntdouble set original value given at command line.  */
  const char *sele1_help; /**< @brief select first stuntdouble set help description.  */
  char * sele2_arg;     /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1).  */
  char * sele2_orig;    /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) original value given at command line.  */
  const char *sele2_help; /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) help description.  */
  int nbins_arg;        /**< @brief number of bins (general purpose) (default='100').  */
  char * nbins_orig;    /**< @brief number of bins (general purpose) original value given at command line.  */
  const char *nbins_help; /**< @brief number of bins (general purpose) help description.  */
  int nbins_z_arg;      /**< @brief number of bins in z axis (default='100').  */
  char * nbins_z_orig;  /**< @brief number of bins in z axis original value given at command line.  */
  const char *nbins_z_help; /**< @brief number of bins in z axis help description.  */
  double centroidX_arg; /**< @brief Location of droplet centroid in x.  */
  char * centroidX_orig;        /**< @brief Location of droplet centroid in x original value given at command line.  */
  const char *centroidX_help; /**< @brief Location of droplet centroid in x help description.  */
  double centroidY_arg; /**< @brief Location of droplet centroid in y.  */
  char * centroidY_orig;        /**< @brief Location of droplet centroid in y original value given at command line.  */
  const char *centroidY_help; /**< @brief Location of droplet centroid in y help description.  */
  double referenceZ_arg;        /**< @brief Reference z-height of solid surface.  */
  char * referenceZ_orig;       /**< @brief Reference z-height of solid surface original value given at command line.  */
  const char *referenceZ_help; /**< @brief Reference z-height of solid surface help description.  */
  double dropletR_arg;  /**< @brief Droplet radius in angstroms.  */
  char * dropletR_orig; /**< @brief Droplet radius in angstroms original value given at command line.  */
  const char *dropletR_help; /**< @brief Droplet radius in angstroms help description.  */
  double threshDens_arg;        /**< @brief Threshold Density in g/cm^3.  */
  char * threshDens_orig;       /**< @brief Threshold Density in g/cm^3 original value given at command line.  */
  const char *threshDens_help; /**< @brief Threshold Density in g/cm^3 help description.  */
  double bufferLength_arg;      /**< @brief Buffer length in angstroms.  */
  char * bufferLength_orig;     /**< @brief Buffer length in angstroms original value given at command line.  */
  const char *bufferLength_help; /**< @brief Buffer length in angstroms help description.  */
  const char *com_help; /**< @brief selection center of mass help description.  */
  const char *ca1_help; /**< @brief contact angle of selection (using center of mass) help description.  */
  const char *ca2_help; /**< @brief contact angle of selection (using density profile) help description.  */
  
  unsigned int help_given ;     /**< @brief Whether help was given.  */
  unsigned int version_given ;  /**< @brief Whether version was given.  */
  unsigned int input_given ;    /**< @brief Whether input was given.  */
  unsigned int output_given ;   /**< @brief Whether output was given.  */
  unsigned int sele1_given ;    /**< @brief Whether sele1 was given.  */
  unsigned int sele2_given ;    /**< @brief Whether sele2 was given.  */
  unsigned int nbins_given ;    /**< @brief Whether nbins was given.  */
  unsigned int nbins_z_given ;  /**< @brief Whether nbins_z was given.  */
  unsigned int centroidX_given ;        /**< @brief Whether centroidX was given.  */
  unsigned int centroidY_given ;        /**< @brief Whether centroidY was given.  */
  unsigned int referenceZ_given ;       /**< @brief Whether referenceZ was given.  */
  unsigned int dropletR_given ; /**< @brief Whether dropletR was given.  */
  unsigned int threshDens_given ;       /**< @brief Whether threshDens was given.  */
  unsigned int bufferLength_given ;     /**< @brief Whether bufferLength was given.  */
  unsigned int com_given ;      /**< @brief Whether com was given.  */
  unsigned int ca1_given ;      /**< @brief Whether ca1 was given.  */
  unsigned int ca2_given ;      /**< @brief Whether ca2 was given.  */

  char **inputs ; /**< @brief unamed options (options without names) */
  unsigned inputs_num ; /**< @brief unamed options number */
  int sequentialProps_group_counter; /**< @brief Counter for group sequentialProps */
} ;

/** @brief The additional parameters to pass to parser functions */
struct cmdline_parser_params
{
  int override; /**< @brief whether to override possibly already present options (default 0) */
  int initialize; /**< @brief whether to initialize the option structure gengetopt_args_info (default 1) */
  int check_required; /**< @brief whether to check that all required options were provided (default 1) */
  int check_ambiguity; /**< @brief whether to check for options already specified in the option structure gengetopt_args_info (default 0) */
  int print_errors; /**< @brief whether getopt_long should print an error message for a bad option (default 1) */
} ;

/** @brief the purpose string of the program */
extern const char *gengetopt_args_info_purpose;
/** @brief the usage string of the program */
extern const char *gengetopt_args_info_usage;
/** @brief all the lines making the help output */
extern const char *gengetopt_args_info_help[];

/**
 * The command line parser
 * @param argc the number of command line options
 * @param argv the command line options
 * @param args_info the structure where option information will be stored
 * @return 0 if everything went fine, NON 0 if an error took place
 */
int cmdline_parser (int argc, char **argv,
  struct gengetopt_args_info *args_info);

/**
 * The command line parser (version with additional parameters - deprecated)
 * @param argc the number of command line options
 * @param argv the command line options
 * @param args_info the structure where option information will be stored
 * @param override whether to override possibly already present options
 * @param initialize whether to initialize the option structure my_args_info
 * @param check_required whether to check that all required options were provided
 * @return 0 if everything went fine, NON 0 if an error took place
 * @deprecated use cmdline_parser_ext() instead
 */
int cmdline_parser2 (int argc, char **argv,
  struct gengetopt_args_info *args_info,
  int override, int initialize, int check_required);

/**
 * The command line parser (version with additional parameters)
 * @param argc the number of command line options
 * @param argv the command line options
 * @param args_info the structure where option information will be stored
 * @param params additional parameters for the parser
 * @return 0 if everything went fine, NON 0 if an error took place
 */
int cmdline_parser_ext (int argc, char **argv,
  struct gengetopt_args_info *args_info,
  struct cmdline_parser_params *params);

/**
 * Save the contents of the option struct into an already open FILE stream.
 * @param outfile the stream where to dump options
 * @param args_info the option struct to dump
 * @return 0 if everything went fine, NON 0 if an error took place
 */
int cmdline_parser_dump(FILE *outfile,
  struct gengetopt_args_info *args_info);

/**
 * Save the contents of the option struct into a (text) file.
 * This file can be read by the config file parser (if generated by gengetopt)
 * @param filename the file where to save
 * @param args_info the option struct to save
 * @return 0 if everything went fine, NON 0 if an error took place
 */
int cmdline_parser_file_save(const char *filename,
  struct gengetopt_args_info *args_info);

/**
 * Print the help
 */
void cmdline_parser_print_help(void);
/**
 * Print the version
 */
void cmdline_parser_print_version(void);

/**
 * Initializes all the fields a cmdline_parser_params structure 
 * to their default values
 * @param params the structure to initialize
 */
void cmdline_parser_params_init(struct cmdline_parser_params *params);

/**
 * Allocates dynamically a cmdline_parser_params structure and initializes
 * all its fields to their default values
 * @return the created and initialized cmdline_parser_params structure
 */
struct cmdline_parser_params *cmdline_parser_params_create(void);

/**
 * Initializes the passed gengetopt_args_info structure's fields
 * (also set default values for options that have a default)
 * @param args_info the structure to initialize
 */
void cmdline_parser_init (struct gengetopt_args_info *args_info);
/**
 * Deallocates the string fields of the gengetopt_args_info structure
 * (but does not deallocate the structure itself)
 * @param args_info the structure to deallocate
 */
void cmdline_parser_free (struct gengetopt_args_info *args_info);

/**
 * Checks that all the required options were specified
 * @param args_info the structure to check
 * @param prog_name the name of the program that will be used to print
 *   possible errors
 * @return
 */
int cmdline_parser_required (struct gengetopt_args_info *args_info,
  const char *prog_name);


#ifdef __cplusplus
}
#endif /* __cplusplus */
#endif /* SEQUENTIALPROPSCMD_H */
Revision:	2081
Committed:	Tue Mar 17 18:22:18 2015 UTC (10 years, 1 month ago) by gezelter
Content type:	text/plain
File size:	11035 byte(s)
Log Message:	ContactAngle2 now requires specification of the location of the droplet centroid in X&Y axes.
#	Content
1	/** @file SequentialPropsCmd.h
2	* @brief The header file for the command line option parser
3	* generated by GNU Gengetopt version 2.22.4
4	* http://www.gnu.org/software/gengetopt.
5	* DO NOT modify this file, since it can be overwritten
6	* @author GNU Gengetopt by Lorenzo Bettini */
7
8	#ifndef SEQUENTIALPROPSCMD_H
9	#define SEQUENTIALPROPSCMD_H
10
11	/* If we use autoconf. */
12	#ifdef HAVE_CONFIG_H
13	#include "config.h"
14	#endif
15
16	#include <stdio.h> /* for FILE */
17
18	#ifdef __cplusplus
19	extern "C" {
20	#endif /* __cplusplus */
21
22	#ifndef CMDLINE_PARSER_PACKAGE
23	/** @brief the program name (used for printing errors) */
24	#define CMDLINE_PARSER_PACKAGE "SequentialProps"
25	#endif
26
27	#ifndef CMDLINE_PARSER_PACKAGE_NAME
28	/** @brief the complete program name (used for help and version) */
29	#define CMDLINE_PARSER_PACKAGE_NAME "SequentialProps"
30	#endif
31
32	#ifndef CMDLINE_PARSER_VERSION
33	/** @brief the program version */
34	#define CMDLINE_PARSER_VERSION "1.00"
35	#endif
36
37	/** @brief Where the command line options are stored */
38	struct gengetopt_args_info
39	{
40	const char help_help; /< @brief Print help and exit help description. /
41	const char version_help; /< @brief Print version and exit help description. /
42	char * input_arg; /*< @brief input dump file. /
43	char * input_orig; /*< @brief input dump file original value given at command line. /
44	const char input_help; /< @brief input dump file help description. /
45	char * output_arg; /*< @brief output file name. /
46	char * output_orig; /*< @brief output file name original value given at command line. /
47	const char output_help; /< @brief output file name help description. /
48	char * sele1_arg; /*< @brief select first stuntdouble set. /
49	char * sele1_orig; /*< @brief select first stuntdouble set original value given at command line. /
50	const char sele1_help; /< @brief select first stuntdouble set help description. /
51	char * sele2_arg; /*< @brief select second stuntdouble set (if sele2 is not set, use script from sele1). /
52	char * sele2_orig; /*< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) original value given at command line. /
53	const char sele2_help; /< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) help description. /
54	int nbins_arg; /*< @brief number of bins (general purpose) (default='100'). /
55	char * nbins_orig; /*< @brief number of bins (general purpose) original value given at command line. /
56	const char nbins_help; /< @brief number of bins (general purpose) help description. /
57	int nbins_z_arg; /*< @brief number of bins in z axis (default='100'). /
58	char * nbins_z_orig; /*< @brief number of bins in z axis original value given at command line. /
59	const char nbins_z_help; /< @brief number of bins in z axis help description. /
60	double centroidX_arg; /*< @brief Location of droplet centroid in x. /
61	char * centroidX_orig; /*< @brief Location of droplet centroid in x original value given at command line. /
62	const char centroidX_help; /< @brief Location of droplet centroid in x help description. /
63	double centroidY_arg; /*< @brief Location of droplet centroid in y. /
64	char * centroidY_orig; /*< @brief Location of droplet centroid in y original value given at command line. /
65	const char centroidY_help; /< @brief Location of droplet centroid in y help description. /
66	double referenceZ_arg; /*< @brief Reference z-height of solid surface. /
67	char * referenceZ_orig; /*< @brief Reference z-height of solid surface original value given at command line. /
68	const char referenceZ_help; /< @brief Reference z-height of solid surface help description. /
69	double dropletR_arg; /*< @brief Droplet radius in angstroms. /
70	char * dropletR_orig; /*< @brief Droplet radius in angstroms original value given at command line. /
71	const char dropletR_help; /< @brief Droplet radius in angstroms help description. /
72	double threshDens_arg; /*< @brief Threshold Density in g/cm^3. /
73	char * threshDens_orig; /*< @brief Threshold Density in g/cm^3 original value given at command line. /
74	const char threshDens_help; /< @brief Threshold Density in g/cm^3 help description. /
75	double bufferLength_arg; /*< @brief Buffer length in angstroms. /
76	char * bufferLength_orig; /*< @brief Buffer length in angstroms original value given at command line. /
77	const char bufferLength_help; /< @brief Buffer length in angstroms help description. /
78	const char com_help; /< @brief selection center of mass help description. /
79	const char ca1_help; /< @brief contact angle of selection (using center of mass) help description. /
80	const char ca2_help; /< @brief contact angle of selection (using density profile) help description. /
81
82	unsigned int help_given ; /*< @brief Whether help was given. /
83	unsigned int version_given ; /*< @brief Whether version was given. /
84	unsigned int input_given ; /*< @brief Whether input was given. /
85	unsigned int output_given ; /*< @brief Whether output was given. /
86	unsigned int sele1_given ; /*< @brief Whether sele1 was given. /
87	unsigned int sele2_given ; /*< @brief Whether sele2 was given. /
88	unsigned int nbins_given ; /*< @brief Whether nbins was given. /
89	unsigned int nbins_z_given ; /*< @brief Whether nbins_z was given. /
90	unsigned int centroidX_given ; /*< @brief Whether centroidX was given. /
91	unsigned int centroidY_given ; /*< @brief Whether centroidY was given. /
92	unsigned int referenceZ_given ; /*< @brief Whether referenceZ was given. /
93	unsigned int dropletR_given ; /*< @brief Whether dropletR was given. /
94	unsigned int threshDens_given ; /*< @brief Whether threshDens was given. /
95	unsigned int bufferLength_given ; /*< @brief Whether bufferLength was given. /
96	unsigned int com_given ; /*< @brief Whether com was given. /
97	unsigned int ca1_given ; /*< @brief Whether ca1 was given. /
98	unsigned int ca2_given ; /*< @brief Whether ca2 was given. /
99
100	char inputs ; /< @brief unamed options (options without names) */
101	unsigned inputs_num ; /*< @brief unamed options number /
102	int sequentialProps_group_counter; /*< @brief Counter for group sequentialProps /
103	} ;
104
105	/** @brief The additional parameters to pass to parser functions */
106	struct cmdline_parser_params
107	{
108	int override; /*< @brief whether to override possibly already present options (default 0) /
109	int initialize; /*< @brief whether to initialize the option structure gengetopt_args_info (default 1) /
110	int check_required; /*< @brief whether to check that all required options were provided (default 1) /
111	int check_ambiguity; /*< @brief whether to check for options already specified in the option structure gengetopt_args_info (default 0) /
112	int print_errors; /*< @brief whether getopt_long should print an error message for a bad option (default 1) /
113	} ;
114
115	/** @brief the purpose string of the program */
116	extern const char *gengetopt_args_info_purpose;
117	/** @brief the usage string of the program */
118	extern const char *gengetopt_args_info_usage;
119	/** @brief all the lines making the help output */
120	extern const char *gengetopt_args_info_help[];
121
122	/**
123	* The command line parser
124	* @param argc the number of command line options
125	* @param argv the command line options
126	* @param args_info the structure where option information will be stored
127	* @return 0 if everything went fine, NON 0 if an error took place
128	*/
129	int cmdline_parser (int argc, char **argv,
130	struct gengetopt_args_info *args_info);
131
132	/**
133	* The command line parser (version with additional parameters - deprecated)
134	* @param argc the number of command line options
135	* @param argv the command line options
136	* @param args_info the structure where option information will be stored
137	* @param override whether to override possibly already present options
138	* @param initialize whether to initialize the option structure my_args_info
139	* @param check_required whether to check that all required options were provided
140	* @return 0 if everything went fine, NON 0 if an error took place
141	* @deprecated use cmdline_parser_ext() instead
142	*/
143	int cmdline_parser2 (int argc, char **argv,
144	struct gengetopt_args_info *args_info,
145	int override, int initialize, int check_required);
146
147	/**
148	* The command line parser (version with additional parameters)
149	* @param argc the number of command line options
150	* @param argv the command line options
151	* @param args_info the structure where option information will be stored
152	* @param params additional parameters for the parser
153	* @return 0 if everything went fine, NON 0 if an error took place
154	*/
155	int cmdline_parser_ext (int argc, char **argv,
156	struct gengetopt_args_info *args_info,
157	struct cmdline_parser_params *params);
158
159	/**
160	* Save the contents of the option struct into an already open FILE stream.
161	* @param outfile the stream where to dump options
162	* @param args_info the option struct to dump
163	* @return 0 if everything went fine, NON 0 if an error took place
164	*/
165	int cmdline_parser_dump(FILE *outfile,
166	struct gengetopt_args_info *args_info);
167
168	/**
169	* Save the contents of the option struct into a (text) file.
170	* This file can be read by the config file parser (if generated by gengetopt)
171	* @param filename the file where to save
172	* @param args_info the option struct to save
173	* @return 0 if everything went fine, NON 0 if an error took place
174	*/
175	int cmdline_parser_file_save(const char *filename,
176	struct gengetopt_args_info *args_info);
177
178	/**
179	* Print the help
180	*/
181	void cmdline_parser_print_help(void);
182	/**
183	* Print the version
184	*/
185	void cmdline_parser_print_version(void);
186
187	/**
188	* Initializes all the fields a cmdline_parser_params structure
189	* to their default values
190	* @param params the structure to initialize
191	*/
192	void cmdline_parser_params_init(struct cmdline_parser_params *params);
193
194	/**
195	* Allocates dynamically a cmdline_parser_params structure and initializes
196	* all its fields to their default values
197	* @return the created and initialized cmdline_parser_params structure
198	*/
199	struct cmdline_parser_params *cmdline_parser_params_create(void);
200
201	/**
202	* Initializes the passed gengetopt_args_info structure's fields
203	* (also set default values for options that have a default)
204	* @param args_info the structure to initialize
205	*/
206	void cmdline_parser_init (struct gengetopt_args_info *args_info);
207	/**
208	* Deallocates the string fields of the gengetopt_args_info structure
209	* (but does not deallocate the structure itself)
210	* @param args_info the structure to deallocate
211	*/
212	void cmdline_parser_free (struct gengetopt_args_info *args_info);
213
214	/**
215	* Checks that all the required options were specified
216	* @param args_info the structure to check
217	* @param prog_name the name of the program that will be used to print
218	* possible errors
219	* @return
220	*/
221	int cmdline_parser_required (struct gengetopt_args_info *args_info,
222	const char *prog_name);
223
224
225	#ifdef __cplusplus
226	}
227	#endif /* __cplusplus */
228	#endif /* SEQUENTIALPROPSCMD_H */