18 |
|
* publication of scientific results based in part on use of the |
19 |
|
* program. An acceptable form of acknowledgement is citation of |
20 |
|
* the article in which the program was described (Matthew |
21 |
< |
* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
22 |
< |
* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
21 |
> |
* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
22 |
> |
* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
23 |
|
* Parallel Simulation Engine for Molecular Dynamics," |
24 |
< |
* J. Comput. Chem. 26, pp. 252-271 (2005)) |
24 |
> |
* J. Comput. Chem. 26, pp. 252-271 (2005)) |
25 |
|
* |
26 |
|
* 2. Redistributions of source code must retain the above copyright |
27 |
|
* notice, this list of conditions and the following disclaimer. |
51 |
|
#ifndef APPLICATIONS_NANORODBUILDER_GEOMETRYBUILDER_HPP |
52 |
|
#define APPLICATIONS_NANORODBUILDER_GEOMETRYBUILDER_HPP |
53 |
|
|
54 |
+ |
#include <string> |
55 |
|
|
55 |
– |
|
56 |
|
namespace oopse { |
57 |
|
|
58 |
< |
class GeometryBuilder{ |
58 |
> |
class GeometryBuilder{ |
59 |
|
|
60 |
|
|
61 |
< |
public: |
61 |
> |
public: |
62 |
|
|
63 |
< |
GeometryBuilder(double length,double width); |
64 |
< |
~GeometryBuilder(){}; |
63 |
> |
GeometryBuilder(RealType length,RealType width); |
64 |
> |
GeometryBuilder(RealType length,RealType width, bool twinned); |
65 |
> |
~GeometryBuilder(){}; |
66 |
|
|
67 |
< |
bool isInsidePolyhedron(double x, double y, double z); |
68 |
< |
private: |
69 |
< |
}; |
70 |
< |
} |
67 |
> |
bool isInsidePolyhedron(RealType x, RealType y, RealType z); |
68 |
> |
void dumpGeometry(const std::string& geomFileName); |
69 |
> |
private: |
70 |
> |
}; |
71 |
> |
} |
72 |
|
#endif //APPLICATIONS_NANORODBUILDER_GEOMETRYBUILDER_HPP |