MERGE OpenMD development 1783:1878 into trunk
MERGE OpenMD development branch 1465:1781 into trunk
Adding property set to svn entries
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
Changes to do hydrodynamics modeling and to explain a diff file
Massive changes for GB code with multiple ellipsoid types (a la Cleaver's paper). Also, changes in hydrodynamics code to make HydroProp a somewhat smarter class (rather than just a struct).
fixes for Hydrodynamics
Using OpenBabel element table to pick vdw radii for hydrodynamics if the LJ sigma can't be found.
Added EAM atom types to Hydro models
Fix a bug in friction calculation for ellipsoid
Verify the correctness of Ellipsoid's hydrodynamics properties
New version of Hydro is working now.
refactor Hydrodynamics module.
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