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* such damages. |
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*/ |
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#include "applications/hydrodynamics/ShapeBuilder.hpp" |
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< |
#include "applications/hydrodynamics/Spheric.hpp" |
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#include "applications/hydrodynamics/Ellipsoid.hpp" |
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> |
#include "hydrodynamics/Sphere.hpp" |
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> |
#include "hydrodynamics/Ellipsoid.hpp" |
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#include "applications/hydrodynamics/CompositeShape.hpp" |
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namespace oopse { |
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|
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< |
Shape* ShapeBuilder::createShape(StuntDouble* sd) { |
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|
47 |
> |
Shape* ShapeBuilder::createShape(StuntDouble* sd) { |
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|
Shape* currShape = NULL; |
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if (sd->isDirectionalAtom()) { |
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currShape = internalCreateShape(static_cast<DirectionalAtom*>(sd)); |
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< |
} else if (sd->isAtom()) { |
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currShape = internalCreateShape(static_cast<Atom*>(sd)); |
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< |
} else if (sd->isRigidBody()) { |
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currShape = internalCreateShape(static_cast<RigidBody*>(sd)); |
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} |
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|
57 |
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|
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|
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return currShape; |
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< |
|
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< |
} |
62 |
< |
|
63 |
< |
Shape* ShapeBuilder::internalCreateShape(Atom* atom) { |
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> |
if (sd->isDirectionalAtom()) { |
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> |
currShape = internalCreateShape(static_cast<DirectionalAtom*>(sd)); |
51 |
> |
} else if (sd->isAtom()) { |
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> |
currShape = internalCreateShape(static_cast<Atom*>(sd)); |
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> |
} else if (sd->isRigidBody()) { |
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> |
currShape = internalCreateShape(static_cast<RigidBody*>(sd)); |
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} |
56 |
> |
return currShape; |
57 |
> |
} |
58 |
> |
|
59 |
> |
Shape* ShapeBuilder::internalCreateShape(Atom* atom) { |
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|
AtomType* atomType = atom->getAtomType(); |
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Shape* currShape = NULL; |
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if (atomType->isLennardJones()){ |
63 |
< |
GenericData* data = atomType->getPropertyByName("LennardJones"); |
64 |
< |
if (data != NULL) { |
65 |
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LJParamGenericData* ljData = dynamic_cast<LJParamGenericData*>(data); |
66 |
< |
|
67 |
< |
if (ljData != NULL) { |
68 |
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LJParam ljParam = ljData->getData(); |
69 |
< |
currShape = new Spheric(atom->getPos(), ljParam.sigma/2.0); |
63 |
> |
GenericData* data = atomType->getPropertyByName("LennardJones"); |
64 |
> |
if (data != NULL) { |
65 |
> |
LJParamGenericData* ljData = dynamic_cast<LJParamGenericData*>(data); |
66 |
> |
|
67 |
> |
if (ljData != NULL) { |
68 |
> |
LJParam ljParam = ljData->getData(); |
69 |
> |
currShape = new Sphere(atom->getPos(), ljParam.sigma/2.0); |
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|
} else { |
71 |
< |
sprintf( painCave.errMsg, |
72 |
< |
"Can not cast GenericData to LJParam\n"); |
73 |
< |
painCave.severity = OOPSE_ERROR; |
74 |
< |
painCave.isFatal = 1; |
75 |
< |
simError(); |
76 |
< |
} |
77 |
< |
} |
78 |
< |
|
71 |
> |
sprintf( painCave.errMsg, |
72 |
> |
"Can not cast GenericData to LJParam\n"); |
73 |
> |
painCave.severity = OOPSE_ERROR; |
74 |
> |
painCave.isFatal = 1; |
75 |
> |
simError(); |
76 |
> |
} |
77 |
> |
} |
78 |
> |
} else { |
79 |
> |
int obanum = etab.GetAtomicNum((atom->getType()).c_str()); |
80 |
> |
if (obanum != 0) { |
81 |
> |
currShape = new Sphere(atom->getPos(), etab.GetVdwRad(obanum)); |
82 |
> |
} else { |
83 |
> |
sprintf( painCave.errMsg, |
84 |
> |
"Could not find atom type in default element.txt\n"); |
85 |
> |
painCave.severity = OOPSE_ERROR; |
86 |
> |
painCave.isFatal = 1; |
87 |
> |
simError(); |
88 |
> |
} |
89 |
|
} |
84 |
– |
|
90 |
|
return currShape; |
91 |
< |
} |
92 |
< |
|
93 |
< |
Shape* ShapeBuilder::internalCreateShape(DirectionalAtom* datom) { |
91 |
> |
} |
92 |
> |
|
93 |
> |
Shape* ShapeBuilder::internalCreateShape(DirectionalAtom* datom) { |
94 |
|
AtomType* atomType = datom->getAtomType(); |
95 |
|
Shape* currShape = NULL; |
96 |
|
if (atomType->isGayBerne()) { |
97 |
< |
DirectionalAtomType* dAtomType = dynamic_cast<DirectionalAtomType*>(atomType); |
98 |
< |
|
99 |
< |
GenericData* data = dAtomType->getPropertyByName("GayBerne"); |
100 |
< |
if (data != NULL) { |
101 |
< |
GayBerneParamGenericData* gayBerneData = dynamic_cast<GayBerneParamGenericData*>(data); |
102 |
< |
|
103 |
< |
if (gayBerneData != NULL) { |
104 |
< |
GayBerneParam gayBerneParam = gayBerneData->getData(); |
105 |
< |
currShape = new Ellipsoid(datom->getPos(), gayBerneParam.GB_sigma/2.0, gayBerneParam.GB_l2b_ratio*gayBerneParam.GB_sigma/2.0, datom->getA()); |
101 |
< |
} else { |
102 |
< |
sprintf( painCave.errMsg, |
103 |
< |
"Can not cast GenericData to GayBerneParam\n"); |
104 |
< |
painCave.severity = OOPSE_ERROR; |
105 |
< |
painCave.isFatal = 1; |
106 |
< |
simError(); |
107 |
< |
} |
97 |
> |
DirectionalAtomType* dAtomType = dynamic_cast<DirectionalAtomType*>(atomType); |
98 |
> |
|
99 |
> |
GenericData* data = dAtomType->getPropertyByName("GayBerne"); |
100 |
> |
if (data != NULL) { |
101 |
> |
GayBerneParamGenericData* gayBerneData = dynamic_cast<GayBerneParamGenericData*>(data); |
102 |
> |
|
103 |
> |
if (gayBerneData != NULL) { |
104 |
> |
GayBerneParam gayBerneParam = gayBerneData->getData(); |
105 |
> |
currShape = new Ellipsoid(datom->getPos(), gayBerneParam.GB_d/2.0, gayBerneParam.GB_l/2.0, datom->getA()); |
106 |
|
} else { |
107 |
< |
sprintf( painCave.errMsg, "Can not find Parameters for GayBerne\n"); |
108 |
< |
painCave.severity = OOPSE_ERROR; |
109 |
< |
painCave.isFatal = 1; |
110 |
< |
simError(); |
111 |
< |
} |
107 |
> |
sprintf( painCave.errMsg, |
108 |
> |
"Can not cast GenericData to GayBerneParam\n"); |
109 |
> |
painCave.severity = OOPSE_ERROR; |
110 |
> |
painCave.isFatal = 1; |
111 |
> |
simError(); |
112 |
> |
} |
113 |
> |
} else { |
114 |
> |
sprintf( painCave.errMsg, "Can not find Parameters for GayBerne\n"); |
115 |
> |
painCave.severity = OOPSE_ERROR; |
116 |
> |
painCave.isFatal = 1; |
117 |
> |
simError(); |
118 |
> |
} |
119 |
> |
} else if (atomType->isLennardJones()) { |
120 |
> |
GenericData* data = atomType->getPropertyByName("LennardJones"); |
121 |
> |
if (data != NULL) { |
122 |
> |
LJParamGenericData* ljData = dynamic_cast<LJParamGenericData*>(data); |
123 |
> |
|
124 |
> |
if (ljData != NULL) { |
125 |
> |
LJParam ljParam = ljData->getData(); |
126 |
> |
currShape = new Sphere(datom->getPos(), ljParam.sigma/2.0); |
127 |
> |
} else { |
128 |
> |
sprintf( painCave.errMsg, |
129 |
> |
"Can not cast GenericData to LJParam\n"); |
130 |
> |
painCave.severity = OOPSE_ERROR; |
131 |
> |
painCave.isFatal = 1; |
132 |
> |
simError(); |
133 |
> |
} |
134 |
> |
} else { |
135 |
> |
int obanum = etab.GetAtomicNum((datom->getType()).c_str()); |
136 |
> |
if (obanum != 0) { |
137 |
> |
currShape = new Sphere(datom->getPos(), etab.GetVdwRad(obanum)); |
138 |
> |
} else { |
139 |
> |
sprintf( painCave.errMsg, |
140 |
> |
"Could not find atom type in default element.txt\n"); |
141 |
> |
painCave.severity = OOPSE_ERROR; |
142 |
> |
painCave.isFatal = 1; |
143 |
> |
simError(); |
144 |
> |
} |
145 |
> |
} |
146 |
|
} |
147 |
|
return currShape; |
148 |
< |
} |
117 |
< |
Shape* ShapeBuilder::internalCreateShape(RigidBody* rb) { |
148 |
> |
} |
149 |
|
|
150 |
< |
std::vector<Atom*>::iterator ai; |
151 |
< |
CompositeShape* compositeShape = new CompositeShape; |
152 |
< |
Atom* atom; |
153 |
< |
for (atom = rb->beginAtom(ai); atom != NULL; atom = rb->nextAtom(ai)) { |
154 |
< |
Shape* currShape = NULL; |
155 |
< |
if (atom->isDirectionalAtom()){ |
156 |
< |
currShape = internalCreateShape(static_cast<DirectionalAtom*>(atom)); |
157 |
< |
}else if (atom->isAtom()){ |
158 |
< |
currShape = internalCreateShape(static_cast<Atom*>(atom)); |
159 |
< |
} |
160 |
< |
if (currShape != NULL) |
161 |
< |
compositeShape->addShape(currShape); |
162 |
< |
} |
163 |
< |
|
164 |
< |
return compositeShape; |
150 |
> |
Shape* ShapeBuilder::internalCreateShape(RigidBody* rb) { |
151 |
> |
|
152 |
> |
std::vector<Atom*>::iterator ai; |
153 |
> |
CompositeShape* compositeShape = new CompositeShape; |
154 |
> |
Atom* atom; |
155 |
> |
for (atom = rb->beginAtom(ai); atom != NULL; atom = rb->nextAtom(ai)) { |
156 |
> |
Shape* currShape = NULL; |
157 |
> |
if (atom->isDirectionalAtom()){ |
158 |
> |
currShape = internalCreateShape(static_cast<DirectionalAtom*>(atom)); |
159 |
> |
}else if (atom->isAtom()){ |
160 |
> |
currShape = internalCreateShape(static_cast<Atom*>(atom)); |
161 |
> |
} |
162 |
> |
if (currShape != NULL) |
163 |
> |
compositeShape->addShape(currShape); |
164 |
> |
} |
165 |
> |
|
166 |
> |
return compositeShape; |
167 |
> |
} |
168 |
|
} |
135 |
– |
|
136 |
– |
} |