--- branches/development/src/applications/hydrodynamics/HydroCmd.cpp	2011/11/22 20:38:56	1665
+++ trunk/src/applications/hydrodynamics/HydroCmd.cpp	2014/04/15 21:26:45	1985
@@ -1,7 +1,7 @@
 /*
   File autogenerated by gengetopt version 2.22.4
   generated with the following command:
-  gengetopt -F HydroCmd -u 
+  gengetopt --file-name=HydroCmd --unamed-opts 
 
   The developers of gengetopt consider the fixed text that goes in all
   gengetopt output files to be in the public domain:
@@ -21,11 +21,15 @@
 #define FIX_UNUSED(X) (void) (X) /* avoid warnings for unused params */
 #endif
 
+#ifdef WIN32
+#include "utils/wingetopt.h"
+#else
 #include <getopt.h>
+#endif
 
 #include "HydroCmd.h"
 
-const char *gengetopt_args_info_purpose = "\n +-----------------------------------------------------------------------+\n |    ____                    __  ___ ____                               |\n |   / __ \\____  ___  ____   /  |/  // __ \\  The Open Molecular Dynamics |\n |  / / / / __ \\/ _ \\/ __ \\ / /|_/ // / / /  Engine (formerly OOPSE).    |\n | / /_/ / /_/ /  __/ / / // /  / // /_/ /                               |\n | \\____/ .___/\\___/_/ /_//_/  /_//_____/    Copyright 2004-2009 by the  |\n |     /_/                                   University of Notre Dame.   |\n |                                                                       |\n |                                           http://www.openmd.net       |\n |                                                                       |\n | OpenMD is an OpenScience project.  All source code is available for   |\n | any use whatsoever under a BSD-style license.                         |\n |                                                                       |\n | Support OpenScience!  If you use OpenMD or its source code in your    |\n | research, please cite the appropriate papers when you publish your    |\n | work.  Good starting points are:                                      |\n |                                                                       |\n | [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).              |\n | [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).           |\n | [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).           |\n | [4]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).                         |\n +-----------------------------------------------------------------------+";
+const char *gengetopt_args_info_purpose = "\n+--------------------------------------------------------------------------+\n|    ____                    __  ___ ____                                  |\n|   / __ \\____  ___  ____   /  |/  // __ \\  The Open Molecular Dynamics    |\n|  / / / / __ \\/ _ \\/ __ \\ / /|_/ // / / /  Engine (formerly OOPSE).       |\n| / /_/ / /_/ /  __/ / / // /  / // /_/ /                                  |\n| \\____/ .___/\\___/_/ /_//_/  /_//_____/    Copyright 2004-2014 by the     |\n|     /_/                                   University of Notre Dame.      |\n|                                                                          |\n|                                           http://www.openmd.org          |\n|                                                                          |\n| OpenMD is an OpenScience project.  All source code is available for      |\n| any use whatsoever under a BSD-style license.                            |\n|                                                                          |\n| Support OpenScience!  If you use OpenMD or its source code in your       |\n| research, please cite the appropriate papers when you publish your       |\n| work.  Good starting points are:                                         |\n|                                                                          |\n| [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).                  |\n| [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).               |\n| [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).              |\n| [4] Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).                |\n| [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |\n| [6] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).                   |\n+--------------------------------------------------------------------------+";
 
 const char *gengetopt_args_info_usage = "Usage: Hydro [OPTIONS]... [FILES]...";
 
@@ -399,13 +403,11 @@ int update_arg(void *field, char **orig_field,
                const char *long_opt, char short_opt,
                const char *additional_error)
 {
-  char *stop_char = 0;
   const char *val = value;
   int found;
   char **string_field;
   FIX_UNUSED (field);
 
-  stop_char = 0;
   found = 0;
 
   if (!multiple_option && prev_given && (*prev_given || (check_ambiguity && *field_given)))