| 1 | /* | 
| 2 | File autogenerated by gengetopt version 2.16 | 
| 3 | generated with the following command: | 
| 4 | gengetopt -F HydroCmd | 
| 5 |  | 
| 6 | The developers of gengetopt consider the fixed text that goes in all | 
| 7 | gengetopt output files to be in the public domain: | 
| 8 | we make no copyright claims on it. | 
| 9 | */ | 
| 10 |  | 
| 11 | /* If we use autoconf.  */ | 
| 12 | #ifdef HAVE_CONFIG_H | 
| 13 | #include "config.h" | 
| 14 | #endif | 
| 15 |  | 
| 16 | #include <stdio.h> | 
| 17 | #include <stdlib.h> | 
| 18 | #include <string.h> | 
| 19 |  | 
| 20 | #include "getopt.h" | 
| 21 |  | 
| 22 | #include "HydroCmd.h" | 
| 23 |  | 
| 24 | static | 
| 25 | void clear_given (struct gengetopt_args_info *args_info); | 
| 26 | static | 
| 27 | void clear_args (struct gengetopt_args_info *args_info); | 
| 28 |  | 
| 29 | static int | 
| 30 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error); | 
| 31 |  | 
| 32 | static int | 
| 33 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error); | 
| 34 |  | 
| 35 | static char * | 
| 36 | gengetopt_strdup (const char *s); | 
| 37 |  | 
| 38 | static | 
| 39 | void clear_given (struct gengetopt_args_info *args_info) | 
| 40 | { | 
| 41 | args_info->help_given = 0 ; | 
| 42 | args_info->version_given = 0 ; | 
| 43 | args_info->input_given = 0 ; | 
| 44 | args_info->output_given = 0 ; | 
| 45 | args_info->model_given = 0 ; | 
| 46 | args_info->beads_given = 0 ; | 
| 47 | } | 
| 48 |  | 
| 49 | static | 
| 50 | void clear_args (struct gengetopt_args_info *args_info) | 
| 51 | { | 
| 52 | args_info->input_arg = NULL; | 
| 53 | args_info->input_orig = NULL; | 
| 54 | args_info->output_arg = gengetopt_strdup ("hydro"); | 
| 55 | args_info->output_orig = NULL; | 
| 56 | args_info->model_arg = NULL; | 
| 57 | args_info->model_orig = NULL; | 
| 58 | args_info->beads_flag = 0; | 
| 59 |  | 
| 60 | } | 
| 61 |  | 
| 62 | void | 
| 63 | cmdline_parser_print_version (void) | 
| 64 | { | 
| 65 | printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION); | 
| 66 | } | 
| 67 |  | 
| 68 | void | 
| 69 | cmdline_parser_print_help (void) | 
| 70 | { | 
| 71 | cmdline_parser_print_version (); | 
| 72 | printf("\nUsage: Hydro [OPTIONS]...\n\n"); | 
| 73 | printf("%s\n","  -h, --help            Print help and exit"); | 
| 74 | printf("%s\n","  -V, --version         Print version and exit"); | 
| 75 | printf("%s\n","  -i, --input=filename  input dump file"); | 
| 76 | printf("%s\n","  -o, --output=STRING   output file prefix  (default=`hydro')"); | 
| 77 | printf("%s\n","      --model=STRING    hydrodynamics model (support RoughShell and BeadModel)"); | 
| 78 | printf("%s\n","  -b, --beads           generate the beads only, hydrodynamics will be \n                          performed  (default=off)"); | 
| 79 |  | 
| 80 | } | 
| 81 |  | 
| 82 | void | 
| 83 | cmdline_parser_init (struct gengetopt_args_info *args_info) | 
| 84 | { | 
| 85 | clear_given (args_info); | 
| 86 | clear_args (args_info); | 
| 87 | } | 
| 88 |  | 
| 89 | static void | 
| 90 | cmdline_parser_release (struct gengetopt_args_info *args_info) | 
| 91 | { | 
| 92 |  | 
| 93 | if (args_info->input_arg) | 
| 94 | { | 
| 95 | free (args_info->input_arg); /* free previous argument */ | 
| 96 | args_info->input_arg = 0; | 
| 97 | } | 
| 98 | if (args_info->input_orig) | 
| 99 | { | 
| 100 | free (args_info->input_orig); /* free previous argument */ | 
| 101 | args_info->input_orig = 0; | 
| 102 | } | 
| 103 | if (args_info->output_arg) | 
| 104 | { | 
| 105 | free (args_info->output_arg); /* free previous argument */ | 
| 106 | args_info->output_arg = 0; | 
| 107 | } | 
| 108 | if (args_info->output_orig) | 
| 109 | { | 
| 110 | free (args_info->output_orig); /* free previous argument */ | 
| 111 | args_info->output_orig = 0; | 
| 112 | } | 
| 113 | if (args_info->model_arg) | 
| 114 | { | 
| 115 | free (args_info->model_arg); /* free previous argument */ | 
| 116 | args_info->model_arg = 0; | 
| 117 | } | 
| 118 | if (args_info->model_orig) | 
| 119 | { | 
| 120 | free (args_info->model_orig); /* free previous argument */ | 
| 121 | args_info->model_orig = 0; | 
| 122 | } | 
| 123 |  | 
| 124 | clear_given (args_info); | 
| 125 | } | 
| 126 |  | 
| 127 | int | 
| 128 | cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info) | 
| 129 | { | 
| 130 | FILE *outfile; | 
| 131 | int i = 0; | 
| 132 |  | 
| 133 | outfile = fopen(filename, "w"); | 
| 134 |  | 
| 135 | if (!outfile) | 
| 136 | { | 
| 137 | fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename); | 
| 138 | return EXIT_FAILURE; | 
| 139 | } | 
| 140 |  | 
| 141 | if (args_info->help_given) { | 
| 142 | fprintf(outfile, "%s\n", "help"); | 
| 143 | } | 
| 144 | if (args_info->version_given) { | 
| 145 | fprintf(outfile, "%s\n", "version"); | 
| 146 | } | 
| 147 | if (args_info->input_given) { | 
| 148 | if (args_info->input_orig) { | 
| 149 | fprintf(outfile, "%s=\"%s\"\n", "input", args_info->input_orig); | 
| 150 | } else { | 
| 151 | fprintf(outfile, "%s\n", "input"); | 
| 152 | } | 
| 153 | } | 
| 154 | if (args_info->output_given) { | 
| 155 | if (args_info->output_orig) { | 
| 156 | fprintf(outfile, "%s=\"%s\"\n", "output", args_info->output_orig); | 
| 157 | } else { | 
| 158 | fprintf(outfile, "%s\n", "output"); | 
| 159 | } | 
| 160 | } | 
| 161 | if (args_info->model_given) { | 
| 162 | if (args_info->model_orig) { | 
| 163 | fprintf(outfile, "%s=\"%s\"\n", "model", args_info->model_orig); | 
| 164 | } else { | 
| 165 | fprintf(outfile, "%s\n", "model"); | 
| 166 | } | 
| 167 | } | 
| 168 | if (args_info->beads_given) { | 
| 169 | fprintf(outfile, "%s\n", "beads"); | 
| 170 | } | 
| 171 |  | 
| 172 | fclose (outfile); | 
| 173 |  | 
| 174 | i = EXIT_SUCCESS; | 
| 175 | return i; | 
| 176 | } | 
| 177 |  | 
| 178 | void | 
| 179 | cmdline_parser_free (struct gengetopt_args_info *args_info) | 
| 180 | { | 
| 181 | cmdline_parser_release (args_info); | 
| 182 | } | 
| 183 |  | 
| 184 |  | 
| 185 | /* gengetopt_strdup() */ | 
| 186 | /* strdup.c replacement of strdup, which is not standard */ | 
| 187 | char * | 
| 188 | gengetopt_strdup (const char *s) | 
| 189 | { | 
| 190 | char *result = NULL; | 
| 191 | if (!s) | 
| 192 | return result; | 
| 193 |  | 
| 194 | result = (char*)malloc(strlen(s) + 1); | 
| 195 | if (result == (char*)0) | 
| 196 | return (char*)0; | 
| 197 | strcpy(result, s); | 
| 198 | return result; | 
| 199 | } | 
| 200 |  | 
| 201 | int | 
| 202 | cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info) | 
| 203 | { | 
| 204 | return cmdline_parser2 (argc, argv, args_info, 0, 1, 1); | 
| 205 | } | 
| 206 |  | 
| 207 | int | 
| 208 | cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required) | 
| 209 | { | 
| 210 | int result; | 
| 211 |  | 
| 212 | result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL); | 
| 213 |  | 
| 214 | if (result == EXIT_FAILURE) | 
| 215 | { | 
| 216 | cmdline_parser_free (args_info); | 
| 217 | exit (EXIT_FAILURE); | 
| 218 | } | 
| 219 |  | 
| 220 | return result; | 
| 221 | } | 
| 222 |  | 
| 223 | int | 
| 224 | cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name) | 
| 225 | { | 
| 226 | int result = EXIT_SUCCESS; | 
| 227 |  | 
| 228 | if (cmdline_parser_required2(args_info, prog_name, NULL) > 0) | 
| 229 | result = EXIT_FAILURE; | 
| 230 |  | 
| 231 | if (result == EXIT_FAILURE) | 
| 232 | { | 
| 233 | cmdline_parser_free (args_info); | 
| 234 | exit (EXIT_FAILURE); | 
| 235 | } | 
| 236 |  | 
| 237 | return result; | 
| 238 | } | 
| 239 |  | 
| 240 | int | 
| 241 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error) | 
| 242 | { | 
| 243 | int error = 0; | 
| 244 |  | 
| 245 | if (! args_info->input_given) | 
| 246 | { | 
| 247 | fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); | 
| 248 | error = 1; | 
| 249 | } | 
| 250 | if (! args_info->model_given) | 
| 251 | { | 
| 252 | fprintf (stderr, "%s: '--model' option required%s\n", prog_name, (additional_error ? additional_error : "")); | 
| 253 | error = 1; | 
| 254 | } | 
| 255 |  | 
| 256 | return error; | 
| 257 | } | 
| 258 |  | 
| 259 | int | 
| 260 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error) | 
| 261 | { | 
| 262 | int c;        /* Character of the parsed option.  */ | 
| 263 |  | 
| 264 | int error = 0; | 
| 265 | struct gengetopt_args_info local_args_info; | 
| 266 |  | 
| 267 | if (initialize) | 
| 268 | cmdline_parser_init (args_info); | 
| 269 |  | 
| 270 | cmdline_parser_init (&local_args_info); | 
| 271 | printf("\n%s\n", "\n+----------------------------------------------------------------------+ \n|    ____  ____  ____  _____ ______  The OpenSource, Object-oriented   | \n|   / __ \\/ __ \\/ __ \\/ ___// ____/  Parallel Simulation Engine.       | \n|  / / / / / / / /_/ /\\__ \\/ __/                                       | \n| / /_/ / /_/ / ____/___/ / /___     Copyright 2004-2006 by the        | \n| \\____/\\____/_/    /____/_____/     University of Notre Dame.         | \n|                                                                      | \n|                                    http://www.oopse.org              |\n|                                                                      | \n| OOPSE is an OpenScience project.  All source code is available for   |\n| any use subject to only one condition:                               | \n|                                                                      |\n| Any published work resulting from the use of this code must cite the | \n| following paper:       M. A. Meineke, C. F. Vardeman II, T. Lin,     | \n|                        C. J. Fennell, and J. D. Gezelter,            | \n|                        J. Comput. Chem. 26, pp. 252-271 (2005).      | \n+----------------------------------------------------------------------+"); | 
| 272 |  | 
| 273 | optarg = 0; | 
| 274 | optind = 0; | 
| 275 | opterr = 1; | 
| 276 | optopt = '?'; | 
| 277 |  | 
| 278 | while (1) | 
| 279 | { | 
| 280 | int option_index = 0; | 
| 281 | char *stop_char; | 
| 282 |  | 
| 283 | static struct option long_options[] = { | 
| 284 | { "help",       0, NULL, 'h' }, | 
| 285 | { "version",    0, NULL, 'V' }, | 
| 286 | { "input",      1, NULL, 'i' }, | 
| 287 | { "output",     1, NULL, 'o' }, | 
| 288 | { "model",      1, NULL, 0 }, | 
| 289 | { "beads",      0, NULL, 'b' }, | 
| 290 | { NULL, 0, NULL, 0 } | 
| 291 | }; | 
| 292 |  | 
| 293 | stop_char = 0; | 
| 294 | c = getopt_long (argc, argv, "hVi:o:b", long_options, &option_index); | 
| 295 |  | 
| 296 | if (c == -1) break;       /* Exit from `while (1)' loop.  */ | 
| 297 |  | 
| 298 | switch (c) | 
| 299 | { | 
| 300 | case 'h':       /* Print help and exit.  */ | 
| 301 | cmdline_parser_print_help (); | 
| 302 | cmdline_parser_free (&local_args_info); | 
| 303 | exit (EXIT_SUCCESS); | 
| 304 |  | 
| 305 | case 'V':       /* Print version and exit.  */ | 
| 306 | cmdline_parser_print_version (); | 
| 307 | cmdline_parser_free (&local_args_info); | 
| 308 | exit (EXIT_SUCCESS); | 
| 309 |  | 
| 310 | case 'i':       /* input dump file.  */ | 
| 311 | if (local_args_info.input_given) | 
| 312 | { | 
| 313 | fprintf (stderr, "%s: `--input' (`-i') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 314 | goto failure; | 
| 315 | } | 
| 316 | if (args_info->input_given && ! override) | 
| 317 | continue; | 
| 318 | local_args_info.input_given = 1; | 
| 319 | args_info->input_given = 1; | 
| 320 | if (args_info->input_arg) | 
| 321 | free (args_info->input_arg); /* free previous string */ | 
| 322 | args_info->input_arg = gengetopt_strdup (optarg); | 
| 323 | if (args_info->input_orig) | 
| 324 | free (args_info->input_orig); /* free previous string */ | 
| 325 | args_info->input_orig = gengetopt_strdup (optarg); | 
| 326 | break; | 
| 327 |  | 
| 328 | case 'o':       /* output file prefix.  */ | 
| 329 | if (local_args_info.output_given) | 
| 330 | { | 
| 331 | fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 332 | goto failure; | 
| 333 | } | 
| 334 | if (args_info->output_given && ! override) | 
| 335 | continue; | 
| 336 | local_args_info.output_given = 1; | 
| 337 | args_info->output_given = 1; | 
| 338 | if (args_info->output_arg) | 
| 339 | free (args_info->output_arg); /* free previous string */ | 
| 340 | args_info->output_arg = gengetopt_strdup (optarg); | 
| 341 | if (args_info->output_orig) | 
| 342 | free (args_info->output_orig); /* free previous string */ | 
| 343 | args_info->output_orig = gengetopt_strdup (optarg); | 
| 344 | break; | 
| 345 |  | 
| 346 | case 'b':       /* generate the beads only, hydrodynamics will be performed.  */ | 
| 347 | if (local_args_info.beads_given) | 
| 348 | { | 
| 349 | fprintf (stderr, "%s: `--beads' (`-b') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 350 | goto failure; | 
| 351 | } | 
| 352 | if (args_info->beads_given && ! override) | 
| 353 | continue; | 
| 354 | local_args_info.beads_given = 1; | 
| 355 | args_info->beads_given = 1; | 
| 356 | args_info->beads_flag = !(args_info->beads_flag); | 
| 357 | break; | 
| 358 |  | 
| 359 |  | 
| 360 | case 0: /* Long option with no short option */ | 
| 361 | /* hydrodynamics model (support RoughShell and BeadModel).  */ | 
| 362 | if (strcmp (long_options[option_index].name, "model") == 0) | 
| 363 | { | 
| 364 | if (local_args_info.model_given) | 
| 365 | { | 
| 366 | fprintf (stderr, "%s: `--model' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 367 | goto failure; | 
| 368 | } | 
| 369 | if (args_info->model_given && ! override) | 
| 370 | continue; | 
| 371 | local_args_info.model_given = 1; | 
| 372 | args_info->model_given = 1; | 
| 373 | if (args_info->model_arg) | 
| 374 | free (args_info->model_arg); /* free previous string */ | 
| 375 | args_info->model_arg = gengetopt_strdup (optarg); | 
| 376 | if (args_info->model_orig) | 
| 377 | free (args_info->model_orig); /* free previous string */ | 
| 378 | args_info->model_orig = gengetopt_strdup (optarg); | 
| 379 | } | 
| 380 |  | 
| 381 | break; | 
| 382 | case '?':       /* Invalid option.  */ | 
| 383 | /* `getopt_long' already printed an error message.  */ | 
| 384 | goto failure; | 
| 385 |  | 
| 386 | default:        /* bug: option not considered.  */ | 
| 387 | fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : "")); | 
| 388 | abort (); | 
| 389 | } /* switch */ | 
| 390 | } /* while */ | 
| 391 |  | 
| 392 |  | 
| 393 |  | 
| 394 | if (check_required) | 
| 395 | { | 
| 396 | error += cmdline_parser_required2 (args_info, argv[0], additional_error); | 
| 397 | } | 
| 398 |  | 
| 399 | cmdline_parser_release (&local_args_info); | 
| 400 |  | 
| 401 | if ( error ) | 
| 402 | goto failure; | 
| 403 |  | 
| 404 | return 0; | 
| 405 |  | 
| 406 | failure: | 
| 407 |  | 
| 408 | cmdline_parser_print_help (); | 
| 409 | cmdline_parser_release (&local_args_info); | 
| 410 | return (EXIT_FAILURE); | 
| 411 | } |