ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/OpenMD/trunk/src/applications/dynamicProps/DynamicPropsCmd.h
Revision: 2003
Committed: Sun Jun 1 19:28:44 2014 UTC (10 years, 11 months ago) by gezelter
Content type: text/plain
File size: 11373 byte(s)
Log Message:
Added Frequency Fluctuation Correlation Function

File Contents

# Content
1 /** @file DynamicPropsCmd.h
2 * @brief The header file for the command line option parser
3 * generated by GNU Gengetopt version 2.22.4
4 * http://www.gnu.org/software/gengetopt.
5 * DO NOT modify this file, since it can be overwritten
6 * @author GNU Gengetopt by Lorenzo Bettini */
7
8 #ifndef DYNAMICPROPSCMD_H
9 #define DYNAMICPROPSCMD_H
10
11 /* If we use autoconf. */
12 #ifdef HAVE_CONFIG_H
13 #include "config.h"
14 #endif
15
16 #include <stdio.h> /* for FILE */
17
18 #ifdef __cplusplus
19 extern "C" {
20 #endif /* __cplusplus */
21
22 #ifndef CMDLINE_PARSER_PACKAGE
23 /** @brief the program name (used for printing errors) */
24 #define CMDLINE_PARSER_PACKAGE "DynamicProps"
25 #endif
26
27 #ifndef CMDLINE_PARSER_PACKAGE_NAME
28 /** @brief the complete program name (used for help and version) */
29 #define CMDLINE_PARSER_PACKAGE_NAME "DynamicProps"
30 #endif
31
32 #ifndef CMDLINE_PARSER_VERSION
33 /** @brief the program version */
34 #define CMDLINE_PARSER_VERSION "1.00"
35 #endif
36
37 /** @brief Where the command line options are stored */
38 struct gengetopt_args_info
39 {
40 const char *help_help; /**< @brief Print help and exit help description. */
41 const char *version_help; /**< @brief Print version and exit help description. */
42 char * input_arg; /**< @brief input dump file. */
43 char * input_orig; /**< @brief input dump file original value given at command line. */
44 const char *input_help; /**< @brief input dump file help description. */
45 char * output_arg; /**< @brief output file name. */
46 char * output_orig; /**< @brief output file name original value given at command line. */
47 const char *output_help; /**< @brief output file name help description. */
48 char * sele1_arg; /**< @brief select first stuntdouble set. */
49 char * sele1_orig; /**< @brief select first stuntdouble set original value given at command line. */
50 const char *sele1_help; /**< @brief select first stuntdouble set help description. */
51 char * sele2_arg; /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1). */
52 char * sele2_orig; /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) original value given at command line. */
53 const char *sele2_help; /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) help description. */
54 int order_arg; /**< @brief Lengendre Polynomial Order. */
55 char * order_orig; /**< @brief Lengendre Polynomial Order original value given at command line. */
56 const char *order_help; /**< @brief Lengendre Polynomial Order help description. */
57 int nzbins_arg; /**< @brief Number of Z bins (default='100'). */
58 char * nzbins_orig; /**< @brief Number of Z bins original value given at command line. */
59 const char *nzbins_help; /**< @brief Number of Z bins help description. */
60 char * memory_arg; /**< @brief Available memory (defaults to 2G) (default='2G'). */
61 char * memory_orig; /**< @brief Available memory (defaults to 2G) original value given at command line. */
62 const char *memory_help; /**< @brief Available memory (defaults to 2G) help description. */
63 const char *selecorr_help; /**< @brief selection correlation function help description. */
64 const char *rcorr_help; /**< @brief rmsd help description. */
65 const char *vcorr_help; /**< @brief velocity correlation function help description. */
66 const char *dcorr_help; /**< @brief dipole correlation function help description. */
67 const char *lcorr_help; /**< @brief Lengendre correlation function help description. */
68 const char *lcorrZ_help; /**< @brief Lengendre correlation function binned by Z help description. */
69 const char *cohZ_help; /**< @brief Lengendre correlation function for OH bond vectors binned by Z help description. */
70 const char *sdcorr_help; /**< @brief System dipole correlation function help description. */
71 const char *r_rcorr_help; /**< @brief Radial rmsd help description. */
72 const char *thetacorr_help; /**< @brief Angular rmsd help description. */
73 const char *drcorr_help; /**< @brief Directional rmsd for particles with unit vectors help description. */
74 const char *helfandEcorr_help; /**< @brief Helfand moment for thermal conductvity help description. */
75 const char *momentum_help; /**< @brief Helfand momentum for viscosity help description. */
76 const char *stresscorr_help; /**< @brief Stress tensor correlation function help description. */
77 const char *bondcorr_help; /**< @brief Bond extension correlation function help description. */
78 const char *freqfluccorr_help; /**< @brief Frequency Fluctuation correlation function help description. */
79
80 unsigned int help_given ; /**< @brief Whether help was given. */
81 unsigned int version_given ; /**< @brief Whether version was given. */
82 unsigned int input_given ; /**< @brief Whether input was given. */
83 unsigned int output_given ; /**< @brief Whether output was given. */
84 unsigned int sele1_given ; /**< @brief Whether sele1 was given. */
85 unsigned int sele2_given ; /**< @brief Whether sele2 was given. */
86 unsigned int order_given ; /**< @brief Whether order was given. */
87 unsigned int nzbins_given ; /**< @brief Whether nzbins was given. */
88 unsigned int memory_given ; /**< @brief Whether memory was given. */
89 unsigned int selecorr_given ; /**< @brief Whether selecorr was given. */
90 unsigned int rcorr_given ; /**< @brief Whether rcorr was given. */
91 unsigned int vcorr_given ; /**< @brief Whether vcorr was given. */
92 unsigned int dcorr_given ; /**< @brief Whether dcorr was given. */
93 unsigned int lcorr_given ; /**< @brief Whether lcorr was given. */
94 unsigned int lcorrZ_given ; /**< @brief Whether lcorrZ was given. */
95 unsigned int cohZ_given ; /**< @brief Whether cohZ was given. */
96 unsigned int sdcorr_given ; /**< @brief Whether sdcorr was given. */
97 unsigned int r_rcorr_given ; /**< @brief Whether r_rcorr was given. */
98 unsigned int thetacorr_given ; /**< @brief Whether thetacorr was given. */
99 unsigned int drcorr_given ; /**< @brief Whether drcorr was given. */
100 unsigned int helfandEcorr_given ; /**< @brief Whether helfandEcorr was given. */
101 unsigned int momentum_given ; /**< @brief Whether momentum was given. */
102 unsigned int stresscorr_given ; /**< @brief Whether stresscorr was given. */
103 unsigned int bondcorr_given ; /**< @brief Whether bondcorr was given. */
104 unsigned int freqfluccorr_given ; /**< @brief Whether freqfluccorr was given. */
105
106 char **inputs ; /**< @brief unamed options (options without names) */
107 unsigned inputs_num ; /**< @brief unamed options number */
108 int dynamicProps_group_counter; /**< @brief Counter for group dynamicProps */
109 } ;
110
111 /** @brief The additional parameters to pass to parser functions */
112 struct cmdline_parser_params
113 {
114 int override; /**< @brief whether to override possibly already present options (default 0) */
115 int initialize; /**< @brief whether to initialize the option structure gengetopt_args_info (default 1) */
116 int check_required; /**< @brief whether to check that all required options were provided (default 1) */
117 int check_ambiguity; /**< @brief whether to check for options already specified in the option structure gengetopt_args_info (default 0) */
118 int print_errors; /**< @brief whether getopt_long should print an error message for a bad option (default 1) */
119 } ;
120
121 /** @brief the purpose string of the program */
122 extern const char *gengetopt_args_info_purpose;
123 /** @brief the usage string of the program */
124 extern const char *gengetopt_args_info_usage;
125 /** @brief all the lines making the help output */
126 extern const char *gengetopt_args_info_help[];
127
128 /**
129 * The command line parser
130 * @param argc the number of command line options
131 * @param argv the command line options
132 * @param args_info the structure where option information will be stored
133 * @return 0 if everything went fine, NON 0 if an error took place
134 */
135 int cmdline_parser (int argc, char **argv,
136 struct gengetopt_args_info *args_info);
137
138 /**
139 * The command line parser (version with additional parameters - deprecated)
140 * @param argc the number of command line options
141 * @param argv the command line options
142 * @param args_info the structure where option information will be stored
143 * @param override whether to override possibly already present options
144 * @param initialize whether to initialize the option structure my_args_info
145 * @param check_required whether to check that all required options were provided
146 * @return 0 if everything went fine, NON 0 if an error took place
147 * @deprecated use cmdline_parser_ext() instead
148 */
149 int cmdline_parser2 (int argc, char **argv,
150 struct gengetopt_args_info *args_info,
151 int override, int initialize, int check_required);
152
153 /**
154 * The command line parser (version with additional parameters)
155 * @param argc the number of command line options
156 * @param argv the command line options
157 * @param args_info the structure where option information will be stored
158 * @param params additional parameters for the parser
159 * @return 0 if everything went fine, NON 0 if an error took place
160 */
161 int cmdline_parser_ext (int argc, char **argv,
162 struct gengetopt_args_info *args_info,
163 struct cmdline_parser_params *params);
164
165 /**
166 * Save the contents of the option struct into an already open FILE stream.
167 * @param outfile the stream where to dump options
168 * @param args_info the option struct to dump
169 * @return 0 if everything went fine, NON 0 if an error took place
170 */
171 int cmdline_parser_dump(FILE *outfile,
172 struct gengetopt_args_info *args_info);
173
174 /**
175 * Save the contents of the option struct into a (text) file.
176 * This file can be read by the config file parser (if generated by gengetopt)
177 * @param filename the file where to save
178 * @param args_info the option struct to save
179 * @return 0 if everything went fine, NON 0 if an error took place
180 */
181 int cmdline_parser_file_save(const char *filename,
182 struct gengetopt_args_info *args_info);
183
184 /**
185 * Print the help
186 */
187 void cmdline_parser_print_help(void);
188 /**
189 * Print the version
190 */
191 void cmdline_parser_print_version(void);
192
193 /**
194 * Initializes all the fields a cmdline_parser_params structure
195 * to their default values
196 * @param params the structure to initialize
197 */
198 void cmdline_parser_params_init(struct cmdline_parser_params *params);
199
200 /**
201 * Allocates dynamically a cmdline_parser_params structure and initializes
202 * all its fields to their default values
203 * @return the created and initialized cmdline_parser_params structure
204 */
205 struct cmdline_parser_params *cmdline_parser_params_create(void);
206
207 /**
208 * Initializes the passed gengetopt_args_info structure's fields
209 * (also set default values for options that have a default)
210 * @param args_info the structure to initialize
211 */
212 void cmdline_parser_init (struct gengetopt_args_info *args_info);
213 /**
214 * Deallocates the string fields of the gengetopt_args_info structure
215 * (but does not deallocate the structure itself)
216 * @param args_info the structure to deallocate
217 */
218 void cmdline_parser_free (struct gengetopt_args_info *args_info);
219
220 /**
221 * Checks that all the required options were specified
222 * @param args_info the structure to check
223 * @param prog_name the name of the program that will be used to print
224 * possible errors
225 * @return
226 */
227 int cmdline_parser_required (struct gengetopt_args_info *args_info,
228 const char *prog_name);
229
230
231 #ifdef __cplusplus
232 }
233 #endif /* __cplusplus */
234 #endif /* DYNAMICPROPSCMD_H */

Properties

Name Value
svn:keywords Author Id Revision Date