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root/OpenMD/trunk/src/applications/dynamicProps/DynamicPropsCmd.c

Comparing trunk/src/applications/dynamicProps/DynamicPropsCmd.c (file contents):
Revision 917 by tim, Fri Mar 24 17:29:07 2006 UTC vs.
Revision 1566 by chuckv, Thu May 19 18:12:09 2011 UTC

#	Line 1 | Line 1
1		/*
2	<	File autogenerated by gengetopt version 2.11
2	>	File autogenerated by gengetopt version 2.22.4
3		generated with the following command:
4	<	/home/maul/gezelter/tim/program/gengetopt-2.11/src/gengetopt -F DynamicPropsCmd
4	>	gengetopt
5
6		The developers of gengetopt consider the fixed text that goes in all
7		gengetopt output files to be in the public domain:
8		we make no copyright claims on it.
9		*/
10
11	+	/* If we use autoconf.  */
12	+	#ifdef HAVE_CONFIG_H
13	+	#include "config.h"
14	+	#endif
15
16		#include <stdio.h>
17		#include <stdlib.h>
18		#include <string.h>
19
20	<	/* If we use autoconf.  */
21	<	#ifdef HAVE_CONFIG_H
18	<	#include "config.h"
20	>	#ifndef FIX_UNUSED
21	>	#define FIX_UNUSED(X) (void) (X) /* avoid warnings for unused params */
22		#endif
23
24	<	#include "getopt.h"
24	>	#include <getopt.h>
25
26		#include "DynamicPropsCmd.h"
27
28	+	const char *gengetopt_args_info_purpose = "";
29	+
30	+	const char *gengetopt_args_info_usage = "Usage: DynamicProps [OPTIONS]...";
31	+
32	+	const char *gengetopt_args_info_description = "";
33	+
34	+	const char *gengetopt_args_info_help[] = {
35	+	"  -h, --help                    Print help and exit",
36	+	"  -V, --version                 Print version and exit",
37	+	"  -i, --input=filename          input dump file",
38	+	"  -o, --output=filename         output file name",
39	+	"      --sele1=selection script  select first stuntdouble set",
40	+	"      --sele2=selection script  select second stuntdouble set (if sele2 is not \n                                  set, use script from sele1)",
41	+	"      --order=INT               Lengendre Polynomial Order",
42	+	"\n Group: dynamicProps\n   an option of this group is required",
43	+	"  -r, --rcorr                   rmsd",
44	+	"  -v, --vcorr                   velocity correlation function",
45	+	"  -d, --dcorr                   dipole correlation function",
46	+	"  -l, --lcorr                   Lengendre correlation function",
47	+	"      --r_rcorr                 Radial rmsd",
48	+	"      --thetacorr               Angular rmsd",
49	+	"      --drcorr                  Directional rmsd for particles with unit \n                                  vectors",
50	+	"      --helfandEcorr            Helfand moment for thermal conductvity",
51	+	"      --stresscorr              Stress tensor correlation function",
52	+	0
53	+	};
54	+
55	+	typedef enum {ARG_NO
56	+	, ARG_STRING
57	+	, ARG_INT
58	+	} cmdline_parser_arg_type;
59	+
60	+	static
61	+	void clear_given (struct gengetopt_args_info *args_info);
62	+	static
63	+	void clear_args (struct gengetopt_args_info *args_info);
64	+
65	+	static int
66	+	cmdline_parser_internal (int argc, char **argv, struct gengetopt_args_info *args_info,
67	+	struct cmdline_parser_params *params, const char *additional_error);
68	+
69	+	static int
70	+	cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error);
71	+
72	+	static char *
73	+	gengetopt_strdup (const char *s);
74	+
75	+	static
76	+	void clear_given (struct gengetopt_args_info *args_info)
77	+	{
78	+	args_info->help_given = 0 ;
79	+	args_info->version_given = 0 ;
80	+	args_info->input_given = 0 ;
81	+	args_info->output_given = 0 ;
82	+	args_info->sele1_given = 0 ;
83	+	args_info->sele2_given = 0 ;
84	+	args_info->order_given = 0 ;
85	+	args_info->rcorr_given = 0 ;
86	+	args_info->vcorr_given = 0 ;
87	+	args_info->dcorr_given = 0 ;
88	+	args_info->lcorr_given = 0 ;
89	+	args_info->r_rcorr_given = 0 ;
90	+	args_info->thetacorr_given = 0 ;
91	+	args_info->drcorr_given = 0 ;
92	+	args_info->helfandEcorr_given = 0 ;
93	+	args_info->stresscorr_given = 0 ;
94	+	args_info->dynamicProps_group_counter = 0 ;
95	+	}
96	+
97	+	static
98	+	void clear_args (struct gengetopt_args_info *args_info)
99	+	{
100	+	FIX_UNUSED (args_info);
101	+	args_info->input_arg = NULL;
102	+	args_info->input_orig = NULL;
103	+	args_info->output_arg = NULL;
104	+	args_info->output_orig = NULL;
105	+	args_info->sele1_arg = NULL;
106	+	args_info->sele1_orig = NULL;
107	+	args_info->sele2_arg = NULL;
108	+	args_info->sele2_orig = NULL;
109	+	args_info->order_orig = NULL;
110	+
111	+	}
112	+
113	+	static
114	+	void init_args_info(struct gengetopt_args_info *args_info)
115	+	{
116	+
117	+
118	+	args_info->help_help = gengetopt_args_info_help[0] ;
119	+	args_info->version_help = gengetopt_args_info_help[1] ;
120	+	args_info->input_help = gengetopt_args_info_help[2] ;
121	+	args_info->output_help = gengetopt_args_info_help[3] ;
122	+	args_info->sele1_help = gengetopt_args_info_help[4] ;
123	+	args_info->sele2_help = gengetopt_args_info_help[5] ;
124	+	args_info->order_help = gengetopt_args_info_help[6] ;
125	+	args_info->rcorr_help = gengetopt_args_info_help[8] ;
126	+	args_info->vcorr_help = gengetopt_args_info_help[9] ;
127	+	args_info->dcorr_help = gengetopt_args_info_help[10] ;
128	+	args_info->lcorr_help = gengetopt_args_info_help[11] ;
129	+	args_info->r_rcorr_help = gengetopt_args_info_help[12] ;
130	+	args_info->thetacorr_help = gengetopt_args_info_help[13] ;
131	+	args_info->drcorr_help = gengetopt_args_info_help[14] ;
132	+	args_info->helfandEcorr_help = gengetopt_args_info_help[15] ;
133	+	args_info->stresscorr_help = gengetopt_args_info_help[16] ;
134	+
135	+	}
136	+
137		void
138		cmdline_parser_print_version (void)
139		{
140	<	printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION);
140	>	printf ("%s %s\n",
141	>	(strlen(CMDLINE_PARSER_PACKAGE_NAME) ? CMDLINE_PARSER_PACKAGE_NAME : CMDLINE_PARSER_PACKAGE),
142	>	CMDLINE_PARSER_VERSION);
143		}
144
145	+	static void print_help_common(void) {
146	+	cmdline_parser_print_version ();
147	+
148	+	if (strlen(gengetopt_args_info_purpose) > 0)
149	+	printf("\n%s\n", gengetopt_args_info_purpose);
150	+
151	+	if (strlen(gengetopt_args_info_usage) > 0)
152	+	printf("\n%s\n", gengetopt_args_info_usage);
153	+
154	+	printf("\n");
155	+
156	+	if (strlen(gengetopt_args_info_description) > 0)
157	+	printf("%s\n\n", gengetopt_args_info_description);
158	+	}
159	+
160		void
161		cmdline_parser_print_help (void)
162		{
163	<	cmdline_parser_print_version ();
164	<	printf("\n"
165	<	"Usage: %s [OPTIONS]...\n", CMDLINE_PARSER_PACKAGE);
166	<	printf("\n");
38	<	printf("  -h, --help                    Print help and exit\n");
39	<	printf("  -V, --version                 Print version and exit\n");
40	<	printf("  -i, --input=filename          input dump file\n");
41	<	printf("  -o, --output=filename         output file name\n");
42	<	printf("      --sele1=selection script  select first stuntdouble set\n");
43	<	printf("      --sele2=selection script  select second stuntdouble set (if sele2 is not \n                                  set, use script from sele1)\n");
44	<	printf("      --order=INT               Lengendre Polynomial Order\n");
45	<	printf("\n");
46	<	printf(" Group: dynamicProps  an option of this group is required\n");
47	<	printf("  -r, --rcorr                   rmsd\n");
48	<	printf("  -v, --vcorr                   velocity correlation function\n");
49	<	printf("  -d, --dcorr                   dipole correlation function\n");
50	<	printf("  -l, --lcorr                   Lengendre correlation function\n");
163	>	int i = 0;
164	>	print_help_common();
165	>	while (gengetopt_args_info_help[i])
166	>	printf("%s\n", gengetopt_args_info_help[i++]);
167		}
168
169	+	void
170	+	cmdline_parser_init (struct gengetopt_args_info *args_info)
171	+	{
172	+	clear_given (args_info);
173	+	clear_args (args_info);
174	+	init_args_info (args_info);
175	+	}
176
177	<	static char *gengetopt_strdup (const char *s);
177	>	void
178	>	cmdline_parser_params_init(struct cmdline_parser_params *params)
179	>	{
180	>	if (params)
181	>	{
182	>	params->override = 0;
183	>	params->initialize = 1;
184	>	params->check_required = 1;
185	>	params->check_ambiguity = 0;
186	>	params->print_errors = 1;
187	>	}
188	>	}
189
190	<	/* gengetopt_strdup() */
191	<	/* strdup.c replacement of strdup, which is not standard */
190	>	struct cmdline_parser_params *
191	>	cmdline_parser_params_create(void)
192	>	{
193	>	struct cmdline_parser_params *params =
194	>	(struct cmdline_parser_params *)malloc(sizeof(struct cmdline_parser_params));
195	>	cmdline_parser_params_init(params);
196	>	return params;
197	>	}
198	>
199	>	static void
200	>	free_string_field (char **s)
201	>	{
202	>	if (*s)
203	>	{
204	>	free (*s);
205	>	*s = 0;
206	>	}
207	>	}
208	>
209	>
210	>	static void
211	>	cmdline_parser_release (struct gengetopt_args_info *args_info)
212	>	{
213	>
214	>	free_string_field (&(args_info->input_arg));
215	>	free_string_field (&(args_info->input_orig));
216	>	free_string_field (&(args_info->output_arg));
217	>	free_string_field (&(args_info->output_orig));
218	>	free_string_field (&(args_info->sele1_arg));
219	>	free_string_field (&(args_info->sele1_orig));
220	>	free_string_field (&(args_info->sele2_arg));
221	>	free_string_field (&(args_info->sele2_orig));
222	>	free_string_field (&(args_info->order_orig));
223	>
224	>
225	>
226	>	clear_given (args_info);
227	>	}
228	>
229	>
230	>	static void
231	>	write_into_file(FILE *outfile, const char *opt, const char *arg, const char *values[])
232	>	{
233	>	FIX_UNUSED (values);
234	>	if (arg) {
235	>	fprintf(outfile, "%s=\"%s\"\n", opt, arg);
236	>	} else {
237	>	fprintf(outfile, "%s\n", opt);
238	>	}
239	>	}
240	>
241	>
242	>	int
243	>	cmdline_parser_dump(FILE *outfile, struct gengetopt_args_info *args_info)
244	>	{
245	>	int i = 0;
246	>
247	>	if (!outfile)
248	>	{
249	>	fprintf (stderr, "%s: cannot dump options to stream\n", CMDLINE_PARSER_PACKAGE);
250	>	return EXIT_FAILURE;
251	>	}
252	>
253	>	if (args_info->help_given)
254	>	write_into_file(outfile, "help", 0, 0 );
255	>	if (args_info->version_given)
256	>	write_into_file(outfile, "version", 0, 0 );
257	>	if (args_info->input_given)
258	>	write_into_file(outfile, "input", args_info->input_orig, 0);
259	>	if (args_info->output_given)
260	>	write_into_file(outfile, "output", args_info->output_orig, 0);
261	>	if (args_info->sele1_given)
262	>	write_into_file(outfile, "sele1", args_info->sele1_orig, 0);
263	>	if (args_info->sele2_given)
264	>	write_into_file(outfile, "sele2", args_info->sele2_orig, 0);
265	>	if (args_info->order_given)
266	>	write_into_file(outfile, "order", args_info->order_orig, 0);
267	>	if (args_info->rcorr_given)
268	>	write_into_file(outfile, "rcorr", 0, 0 );
269	>	if (args_info->vcorr_given)
270	>	write_into_file(outfile, "vcorr", 0, 0 );
271	>	if (args_info->dcorr_given)
272	>	write_into_file(outfile, "dcorr", 0, 0 );
273	>	if (args_info->lcorr_given)
274	>	write_into_file(outfile, "lcorr", 0, 0 );
275	>	if (args_info->r_rcorr_given)
276	>	write_into_file(outfile, "r_rcorr", 0, 0 );
277	>	if (args_info->thetacorr_given)
278	>	write_into_file(outfile, "thetacorr", 0, 0 );
279	>	if (args_info->drcorr_given)
280	>	write_into_file(outfile, "drcorr", 0, 0 );
281	>	if (args_info->helfandEcorr_given)
282	>	write_into_file(outfile, "helfandEcorr", 0, 0 );
283	>	if (args_info->stresscorr_given)
284	>	write_into_file(outfile, "stresscorr", 0, 0 );
285	>
286	>
287	>	i = EXIT_SUCCESS;
288	>	return i;
289	>	}
290	>
291	>	int
292	>	cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info)
293	>	{
294	>	FILE *outfile;
295	>	int i = 0;
296	>
297	>	outfile = fopen(filename, "w");
298	>
299	>	if (!outfile)
300	>	{
301	>	fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename);
302	>	return EXIT_FAILURE;
303	>	}
304	>
305	>	i = cmdline_parser_dump(outfile, args_info);
306	>	fclose (outfile);
307	>
308	>	return i;
309	>	}
310	>
311	>	void
312	>	cmdline_parser_free (struct gengetopt_args_info *args_info)
313	>	{
314	>	cmdline_parser_release (args_info);
315	>	}
316	>
317	>	/** @brief replacement of strdup, which is not standard */
318		char *
319		gengetopt_strdup (const char *s)
320		{
321	<	char *result = (char*)malloc(strlen(s) + 1);
321	>	char *result = 0;
322	>	if (!s)
323	>	return result;
324	>
325	>	result = (char*)malloc(strlen(s) + 1);
326		if (result == (char*)0)
327		return (char*)0;
328		strcpy(result, s);
329		return result;
330		}
331
332	<	int
333	<	cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info)
332	>	static void
333	>	reset_group_dynamicProps(struct gengetopt_args_info *args_info)
334		{
335	<	int c;        /* Character of the parsed option.  */
336	<	int missing_required_options = 0;
73	<	int dynamicProps_group_counter = 0;
335	>	if (! args_info->dynamicProps_group_counter)
336	>	return;
337
75	–
76	–	args_info->help_given = 0 ;
77	–	args_info->version_given = 0 ;
78	–	args_info->input_given = 0 ;
79	–	args_info->output_given = 0 ;
80	–	args_info->sele1_given = 0 ;
81	–	args_info->sele2_given = 0 ;
82	–	args_info->order_given = 0 ;
338		args_info->rcorr_given = 0 ;
339		args_info->vcorr_given = 0 ;
340		args_info->dcorr_given = 0 ;
341		args_info->lcorr_given = 0 ;
342	<	#define clear_args() { \
343	<	args_info->input_arg = NULL; \
344	<	args_info->output_arg = NULL; \
345	<	args_info->sele1_arg = NULL; \
346	<	args_info->sele2_arg = NULL; \
342	>	args_info->r_rcorr_given = 0 ;
343	>	args_info->thetacorr_given = 0 ;
344	>	args_info->drcorr_given = 0 ;
345	>	args_info->helfandEcorr_given = 0 ;
346	>	args_info->stresscorr_given = 0 ;
347	>
348	>	args_info->dynamicProps_group_counter = 0;
349		}
350
351	<	clear_args();
351	>	int
352	>	cmdline_parser (int argc, char **argv, struct gengetopt_args_info *args_info)
353	>	{
354	>	return cmdline_parser2 (argc, argv, args_info, 0, 1, 1);
355	>	}
356
357	+	int
358	+	cmdline_parser_ext (int argc, char **argv, struct gengetopt_args_info *args_info,
359	+	struct cmdline_parser_params *params)
360	+	{
361	+	int result;
362	+	result = cmdline_parser_internal (argc, argv, args_info, params, 0);
363	+
364	+	if (result == EXIT_FAILURE)
365	+	{
366	+	cmdline_parser_free (args_info);
367	+	exit (EXIT_FAILURE);
368	+	}
369	+
370	+	return result;
371	+	}
372	+
373	+	int
374	+	cmdline_parser2 (int argc, char **argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
375	+	{
376	+	int result;
377	+	struct cmdline_parser_params params;
378	+
379	+	params.override = override;
380	+	params.initialize = initialize;
381	+	params.check_required = check_required;
382	+	params.check_ambiguity = 0;
383	+	params.print_errors = 1;
384	+
385	+	result = cmdline_parser_internal (argc, argv, args_info, &params, 0);
386	+
387	+	if (result == EXIT_FAILURE)
388	+	{
389	+	cmdline_parser_free (args_info);
390	+	exit (EXIT_FAILURE);
391	+	}
392	+
393	+	return result;
394	+	}
395	+
396	+	int
397	+	cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name)
398	+	{
399	+	int result = EXIT_SUCCESS;
400	+
401	+	if (cmdline_parser_required2(args_info, prog_name, 0) > 0)
402	+	result = EXIT_FAILURE;
403	+
404	+	if (result == EXIT_FAILURE)
405	+	{
406	+	cmdline_parser_free (args_info);
407	+	exit (EXIT_FAILURE);
408	+	}
409	+
410	+	return result;
411	+	}
412	+
413	+	int
414	+	cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error)
415	+	{
416	+	int error = 0;
417	+	FIX_UNUSED (additional_error);
418	+
419	+	/* checks for required options */
420	+	if (! args_info->input_given)
421	+	{
422	+	fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : ""));
423	+	error = 1;
424	+	}
425	+
426	+	if (args_info->dynamicProps_group_counter == 0)
427	+	{
428	+	fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required%s.\n", prog_name, args_info->dynamicProps_group_counter, (additional_error ? additional_error : ""));
429	+	error = 1;
430	+	}
431	+
432	+
433	+	/* checks for dependences among options */
434	+
435	+	return error;
436	+	}
437	+
438	+
439	+	static char *package_name = 0;
440	+
441	+	/**
442	+	* @brief updates an option
443	+	* @param field the generic pointer to the field to update
444	+	* @param orig_field the pointer to the orig field
445	+	* @param field_given the pointer to the number of occurrence of this option
446	+	* @param prev_given the pointer to the number of occurrence already seen
447	+	* @param value the argument for this option (if null no arg was specified)
448	+	* @param possible_values the possible values for this option (if specified)
449	+	* @param default_value the default value (in case the option only accepts fixed values)
450	+	* @param arg_type the type of this option
451	+	* @param check_ambiguity @see cmdline_parser_params.check_ambiguity
452	+	* @param override @see cmdline_parser_params.override
453	+	* @param no_free whether to free a possible previous value
454	+	* @param multiple_option whether this is a multiple option
455	+	* @param long_opt the corresponding long option
456	+	* @param short_opt the corresponding short option (or '-' if none)
457	+	* @param additional_error possible further error specification
458	+	*/
459	+	static
460	+	int update_arg(void *field, char **orig_field,
461	+	unsigned int *field_given, unsigned int *prev_given,
462	+	char *value, const char *possible_values[],
463	+	const char *default_value,
464	+	cmdline_parser_arg_type arg_type,
465	+	int check_ambiguity, int override,
466	+	int no_free, int multiple_option,
467	+	const char *long_opt, char short_opt,
468	+	const char *additional_error)
469	+	{
470	+	char *stop_char = 0;
471	+	const char *val = value;
472	+	int found;
473	+	char **string_field;
474	+	FIX_UNUSED (field);
475	+
476	+	stop_char = 0;
477	+	found = 0;
478	+
479	+	if (!multiple_option && prev_given && (*prev_given || (check_ambiguity && *field_given)))
480	+	{
481	+	if (short_opt != '-')
482	+	fprintf (stderr, "%s: `--%s' (`-%c') option given more than once%s\n",
483	+	package_name, long_opt, short_opt,
484	+	(additional_error ? additional_error : ""));
485	+	else
486	+	fprintf (stderr, "%s: `--%s' option given more than once%s\n",
487	+	package_name, long_opt,
488	+	(additional_error ? additional_error : ""));
489	+	return 1; /* failure */
490	+	}
491	+
492	+	FIX_UNUSED (default_value);
493	+
494	+	if (field_given && *field_given && ! override)
495	+	return 0;
496	+	if (prev_given)
497	+	(*prev_given)++;
498	+	if (field_given)
499	+	(*field_given)++;
500	+	if (possible_values)
501	+	val = possible_values[found];
502	+
503	+	switch(arg_type) {
504	+	case ARG_INT:
505	+	if (val) *((int *)field) = strtol (val, &stop_char, 0);
506	+	break;
507	+	case ARG_STRING:
508	+	if (val) {
509	+	string_field = (char **)field;
510	+	if (!no_free && *string_field)
511	+	free (*string_field); /* free previous string */
512	+	*string_field = gengetopt_strdup (val);
513	+	}
514	+	break;
515	+	default:
516	+	break;
517	+	};
518	+
519	+	/* check numeric conversion */
520	+	switch(arg_type) {
521	+	case ARG_INT:
522	+	if (val && !(stop_char && *stop_char == '\0')) {
523	+	fprintf(stderr, "%s: invalid numeric value: %s\n", package_name, val);
524	+	return 1; /* failure */
525	+	}
526	+	break;
527	+	default:
528	+	;
529	+	};
530	+
531	+	/* store the original value */
532	+	switch(arg_type) {
533	+	case ARG_NO:
534	+	break;
535	+	default:
536	+	if (value && orig_field) {
537	+	if (no_free) {
538	+	*orig_field = value;
539	+	} else {
540	+	if (*orig_field)
541	+	free (*orig_field); /* free previous string */
542	+	*orig_field = gengetopt_strdup (value);
543	+	}
544	+	}
545	+	};
546	+
547	+	return 0; /* OK */
548	+	}
549	+
550	+
551	+	int
552	+	cmdline_parser_internal (
553	+	int argc, char **argv, struct gengetopt_args_info *args_info,
554	+	struct cmdline_parser_params *params, const char *additional_error)
555	+	{
556	+	int c;        /* Character of the parsed option.  */
557	+
558	+	int error = 0;
559	+	struct gengetopt_args_info local_args_info;
560	+
561	+	int override;
562	+	int initialize;
563	+	int check_required;
564	+	int check_ambiguity;
565	+
566	+	package_name = argv[0];
567	+
568	+	override = params->override;
569	+	initialize = params->initialize;
570	+	check_required = params->check_required;
571	+	check_ambiguity = params->check_ambiguity;
572	+
573	+	if (initialize)
574	+	cmdline_parser_init (args_info);
575	+
576	+	cmdline_parser_init (&local_args_info);
577	+
578		optarg = 0;
579	<	optind = 1;
580	<	opterr = 1;
579	>	optind = 0;
580	>	opterr = params->print_errors;
581		optopt = '?';
582
583		while (1)
584		{
585		int option_index = 0;
104	–	char *stop_char;
586
587		static struct option long_options[] = {
588		{ "help",       0, NULL, 'h' },
#	Line 115 | Line 596 | cmdline_parser (int argc, char * const *argv, struct g
596		{ "vcorr",      0, NULL, 'v' },
597		{ "dcorr",      0, NULL, 'd' },
598		{ "lcorr",      0, NULL, 'l' },
599	<	{ NULL, 0, NULL, 0 }
599	>	{ "r_rcorr",    0, NULL, 0 },
600	>	{ "thetacorr",  0, NULL, 0 },
601	>	{ "drcorr",     0, NULL, 0 },
602	>	{ "helfandEcorr",       0, NULL, 0 },
603	>	{ "stresscorr", 0, NULL, 0 },
604	>	{ 0,  0, 0, 0 }
605		};
606
121	–	stop_char = 0;
607		c = getopt_long (argc, argv, "hVi:o:rvdl", long_options, &option_index);
608
609		if (c == -1) break;       /* Exit from `while (1)' loop.  */
#	Line 126 | Line 611 | cmdline_parser (int argc, char * const *argv, struct g
611		switch (c)
612		{
613		case 'h':       /* Print help and exit.  */
129	–	clear_args ();
614		cmdline_parser_print_help ();
615	+	cmdline_parser_free (&local_args_info);
616		exit (EXIT_SUCCESS);
617
618		case 'V':       /* Print version and exit.  */
134	–	clear_args ();
619		cmdline_parser_print_version ();
620	+	cmdline_parser_free (&local_args_info);
621		exit (EXIT_SUCCESS);
622
623		case 'i':       /* input dump file.  */
624	<	if (args_info->input_given)
625	<	{
626	<	fprintf (stderr, "%s: `--input' (`-i') option given more than once\n", CMDLINE_PARSER_PACKAGE);
627	<	clear_args ();
628	<	exit (EXIT_FAILURE);
629	<	}
630	<	args_info->input_given = 1;
631	<	args_info->input_arg = gengetopt_strdup (optarg);
624	>
625	>
626	>	if (update_arg( (void *)&(args_info->input_arg),
627	>	&(args_info->input_orig), &(args_info->input_given),
628	>	&(local_args_info.input_given), optarg, 0, 0, ARG_STRING,
629	>	check_ambiguity, override, 0, 0,
630	>	"input", 'i',
631	>	additional_error))
632	>	goto failure;
633	>
634		break;
148	–
635		case 'o':       /* output file name.  */
636	<	if (args_info->output_given)
637	<	{
638	<	fprintf (stderr, "%s: `--output' (`-o') option given more than once\n", CMDLINE_PARSER_PACKAGE);
639	<	clear_args ();
640	<	exit (EXIT_FAILURE);
641	<	}
642	<	args_info->output_given = 1;
643	<	args_info->output_arg = gengetopt_strdup (optarg);
636	>
637	>
638	>	if (update_arg( (void *)&(args_info->output_arg),
639	>	&(args_info->output_orig), &(args_info->output_given),
640	>	&(local_args_info.output_given), optarg, 0, 0, ARG_STRING,
641	>	check_ambiguity, override, 0, 0,
642	>	"output", 'o',
643	>	additional_error))
644	>	goto failure;
645	>
646		break;
159	–
647		case 'r':       /* rmsd.  */
648	<	if (args_info->rcorr_given)
649	<	{
650	<	fprintf (stderr, "%s: `--rcorr' (`-r') option given more than once\n", CMDLINE_PARSER_PACKAGE);
651	<	clear_args ();
652	<	exit (EXIT_FAILURE);
653	<	}
654	<	args_info->rcorr_given = 1;
655	<	dynamicProps_group_counter += 1;
656	<	break;
657	<
648	>
649	>	if (args_info->dynamicProps_group_counter && override)
650	>	reset_group_dynamicProps (args_info);
651	>	args_info->dynamicProps_group_counter += 1;
652	>
653	>	if (update_arg( 0 ,
654	>	0 , &(args_info->rcorr_given),
655	>	&(local_args_info.rcorr_given), optarg, 0, 0, ARG_NO,
656	>	check_ambiguity, override, 0, 0,
657	>	"rcorr", 'r',
658	>	additional_error))
659	>	goto failure;
660	>
661	>	break;
662		case 'v':       /* velocity correlation function.  */
663	<	if (args_info->vcorr_given)
664	<	{
665	<	fprintf (stderr, "%s: `--vcorr' (`-v') option given more than once\n", CMDLINE_PARSER_PACKAGE);
666	<	clear_args ();
667	<	exit (EXIT_FAILURE);
668	<	}
669	<	args_info->vcorr_given = 1;
670	<	dynamicProps_group_counter += 1;
671	<	break;
672	<
663	>
664	>	if (args_info->dynamicProps_group_counter && override)
665	>	reset_group_dynamicProps (args_info);
666	>	args_info->dynamicProps_group_counter += 1;
667	>
668	>	if (update_arg( 0 ,
669	>	0 , &(args_info->vcorr_given),
670	>	&(local_args_info.vcorr_given), optarg, 0, 0, ARG_NO,
671	>	check_ambiguity, override, 0, 0,
672	>	"vcorr", 'v',
673	>	additional_error))
674	>	goto failure;
675	>
676	>	break;
677		case 'd':       /* dipole correlation function.  */
678	<	if (args_info->dcorr_given)
679	<	{
680	<	fprintf (stderr, "%s: `--dcorr' (`-d') option given more than once\n", CMDLINE_PARSER_PACKAGE);
681	<	clear_args ();
682	<	exit (EXIT_FAILURE);
683	<	}
684	<	args_info->dcorr_given = 1;
685	<	dynamicProps_group_counter += 1;
686	<	break;
687	<
678	>
679	>	if (args_info->dynamicProps_group_counter && override)
680	>	reset_group_dynamicProps (args_info);
681	>	args_info->dynamicProps_group_counter += 1;
682	>
683	>	if (update_arg( 0 ,
684	>	0 , &(args_info->dcorr_given),
685	>	&(local_args_info.dcorr_given), optarg, 0, 0, ARG_NO,
686	>	check_ambiguity, override, 0, 0,
687	>	"dcorr", 'd',
688	>	additional_error))
689	>	goto failure;
690	>
691	>	break;
692		case 'l':       /* Lengendre correlation function.  */
693	<	if (args_info->lcorr_given)
694	<	{
695	<	fprintf (stderr, "%s: `--lcorr' (`-l') option given more than once\n", CMDLINE_PARSER_PACKAGE);
696	<	clear_args ();
697	<	exit (EXIT_FAILURE);
698	<	}
699	<	args_info->lcorr_given = 1;
700	<	dynamicProps_group_counter += 1;
701	<	break;
693	>
694	>	if (args_info->dynamicProps_group_counter && override)
695	>	reset_group_dynamicProps (args_info);
696	>	args_info->dynamicProps_group_counter += 1;
697	>
698	>	if (update_arg( 0 ,
699	>	0 , &(args_info->lcorr_given),
700	>	&(local_args_info.lcorr_given), optarg, 0, 0, ARG_NO,
701	>	check_ambiguity, override, 0, 0,
702	>	"lcorr", 'l',
703	>	additional_error))
704	>	goto failure;
705	>
706	>	break;
707
204	–
708		case 0: /* Long option with no short option */
709		/* select first stuntdouble set.  */
710		if (strcmp (long_options[option_index].name, "sele1") == 0)
711		{
209	–	if (args_info->sele1_given)
210	–	{
211	–	fprintf (stderr, "%s: `--sele1' option given more than once\n", CMDLINE_PARSER_PACKAGE);
212	–	clear_args ();
213	–	exit (EXIT_FAILURE);
214	–	}
215	–	args_info->sele1_given = 1;
216	–	args_info->sele1_arg = gengetopt_strdup (optarg);
217	–	break;
218	–	}
712
713	+
714	+	if (update_arg( (void *)&(args_info->sele1_arg),
715	+	&(args_info->sele1_orig), &(args_info->sele1_given),
716	+	&(local_args_info.sele1_given), optarg, 0, 0, ARG_STRING,
717	+	check_ambiguity, override, 0, 0,
718	+	"sele1", '-',
719	+	additional_error))
720	+	goto failure;
721	+
722	+	}
723		/* select second stuntdouble set (if sele2 is not set, use script from sele1).  */
724		else if (strcmp (long_options[option_index].name, "sele2") == 0)
725		{
223	–	if (args_info->sele2_given)
224	–	{
225	–	fprintf (stderr, "%s: `--sele2' option given more than once\n", CMDLINE_PARSER_PACKAGE);
226	–	clear_args ();
227	–	exit (EXIT_FAILURE);
228	–	}
229	–	args_info->sele2_given = 1;
230	–	args_info->sele2_arg = gengetopt_strdup (optarg);
231	–	break;
232	–	}
726
727	+
728	+	if (update_arg( (void *)&(args_info->sele2_arg),
729	+	&(args_info->sele2_orig), &(args_info->sele2_given),
730	+	&(local_args_info.sele2_given), optarg, 0, 0, ARG_STRING,
731	+	check_ambiguity, override, 0, 0,
732	+	"sele2", '-',
733	+	additional_error))
734	+	goto failure;
735	+
736	+	}
737		/* Lengendre Polynomial Order.  */
738		else if (strcmp (long_options[option_index].name, "order") == 0)
739		{
740	<	if (args_info->order_given)
741	<	{
742	<	fprintf (stderr, "%s: `--order' option given more than once\n", CMDLINE_PARSER_PACKAGE);
743	<	clear_args ();
744	<	exit (EXIT_FAILURE);
745	<	}
746	<	args_info->order_given = 1;
747	<	args_info->order_arg = strtol (optarg,&stop_char,0);
748	<	break;
740	>
741	>
742	>	if (update_arg( (void *)&(args_info->order_arg),
743	>	&(args_info->order_orig), &(args_info->order_given),
744	>	&(local_args_info.order_given), optarg, 0, 0, ARG_INT,
745	>	check_ambiguity, override, 0, 0,
746	>	"order", '-',
747	>	additional_error))
748	>	goto failure;
749	>
750		}
751	+	/* Radial rmsd.  */
752	+	else if (strcmp (long_options[option_index].name, "r_rcorr") == 0)
753	+	{
754
755	<
755	>	if (args_info->dynamicProps_group_counter && override)
756	>	reset_group_dynamicProps (args_info);
757	>	args_info->dynamicProps_group_counter += 1;
758	>
759	>	if (update_arg( 0 ,
760	>	0 , &(args_info->r_rcorr_given),
761	>	&(local_args_info.r_rcorr_given), optarg, 0, 0, ARG_NO,
762	>	check_ambiguity, override, 0, 0,
763	>	"r_rcorr", '-',
764	>	additional_error))
765	>	goto failure;
766	>
767	>	}
768	>	/* Angular rmsd.  */
769	>	else if (strcmp (long_options[option_index].name, "thetacorr") == 0)
770	>	{
771	>
772	>	if (args_info->dynamicProps_group_counter && override)
773	>	reset_group_dynamicProps (args_info);
774	>	args_info->dynamicProps_group_counter += 1;
775	>
776	>	if (update_arg( 0 ,
777	>	0 , &(args_info->thetacorr_given),
778	>	&(local_args_info.thetacorr_given), optarg, 0, 0, ARG_NO,
779	>	check_ambiguity, override, 0, 0,
780	>	"thetacorr", '-',
781	>	additional_error))
782	>	goto failure;
783	>
784	>	}
785	>	/* Directional rmsd for particles with unit vectors.  */
786	>	else if (strcmp (long_options[option_index].name, "drcorr") == 0)
787	>	{
788	>
789	>	if (args_info->dynamicProps_group_counter && override)
790	>	reset_group_dynamicProps (args_info);
791	>	args_info->dynamicProps_group_counter += 1;
792	>
793	>	if (update_arg( 0 ,
794	>	0 , &(args_info->drcorr_given),
795	>	&(local_args_info.drcorr_given), optarg, 0, 0, ARG_NO,
796	>	check_ambiguity, override, 0, 0,
797	>	"drcorr", '-',
798	>	additional_error))
799	>	goto failure;
800	>
801	>	}
802	>	/* Helfand moment for thermal conductvity.  */
803	>	else if (strcmp (long_options[option_index].name, "helfandEcorr") == 0)
804	>	{
805	>
806	>	if (args_info->dynamicProps_group_counter && override)
807	>	reset_group_dynamicProps (args_info);
808	>	args_info->dynamicProps_group_counter += 1;
809	>
810	>	if (update_arg( 0 ,
811	>	0 , &(args_info->helfandEcorr_given),
812	>	&(local_args_info.helfandEcorr_given), optarg, 0, 0, ARG_NO,
813	>	check_ambiguity, override, 0, 0,
814	>	"helfandEcorr", '-',
815	>	additional_error))
816	>	goto failure;
817	>
818	>	}
819	>	/* Stress tensor correlation function.  */
820	>	else if (strcmp (long_options[option_index].name, "stresscorr") == 0)
821	>	{
822	>
823	>	if (args_info->dynamicProps_group_counter && override)
824	>	reset_group_dynamicProps (args_info);
825	>	args_info->dynamicProps_group_counter += 1;
826	>
827	>	if (update_arg( 0 ,
828	>	0 , &(args_info->stresscorr_given),
829	>	&(local_args_info.stresscorr_given), optarg, 0, 0, ARG_NO,
830	>	check_ambiguity, override, 0, 0,
831	>	"stresscorr", '-',
832	>	additional_error))
833	>	goto failure;
834	>
835	>	}
836	>
837	>	break;
838		case '?':       /* Invalid option.  */
839		/* `getopt_long' already printed an error message.  */
840	<	exit (EXIT_FAILURE);
840	>	goto failure;
841
842		default:        /* bug: option not considered.  */
843	<	fprintf (stderr, "%s: option unknown: %c\n", CMDLINE_PARSER_PACKAGE, c);
843	>	fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : ""));
844		abort ();
845		} /* switch */
846		} /* while */
847
848	<	if ( dynamicProps_group_counter != 1)
848	>	if (args_info->dynamicProps_group_counter > 1)
849		{
850	<	fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required\n", CMDLINE_PARSER_PACKAGE, dynamicProps_group_counter);
851	<	missing_required_options = 1;
850	>	fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required%s.\n", argv[0], args_info->dynamicProps_group_counter, (additional_error ? additional_error : ""));
851	>	error = 1;
852		}
853
854
855	<	if (! args_info->input_given)
855	>
856	>	if (check_required)
857		{
858	<	fprintf (stderr, "%s: '--input' ('-i') option required\n", CMDLINE_PARSER_PACKAGE);
269	<	missing_required_options = 1;
858	>	error += cmdline_parser_required2 (args_info, argv[0], additional_error);
859		}
271	–	if ( missing_required_options )
272	–	exit (EXIT_FAILURE);
860
861	+	cmdline_parser_release (&local_args_info);
862	+
863	+	if ( error )
864	+	return (EXIT_FAILURE);
865	+
866		return 0;
867	+
868	+	failure:
869	+
870	+	cmdline_parser_release (&local_args_info);
871	+	return (EXIT_FAILURE);
872		}

Comparing trunk/src/applications/dynamicProps/DynamicPropsCmd.c (property svn:keywords):
Revision 917 by tim, Fri Mar 24 17:29:07 2006 UTC vs.
Revision 1566 by chuckv, Thu May 19 18:12:09 2011 UTC

#	Line 0 | Line 1
1	+	Author Id Revision Date

Diff Legend

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+	Added lines
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