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/* |
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File autogenerated by gengetopt version 2.22.4 |
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generated with the following command: |
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gengetopt |
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|
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The developers of gengetopt consider the fixed text that goes in all |
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gengetopt output files to be in the public domain: |
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we make no copyright claims on it. |
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*/ |
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|
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/* If we use autoconf. */ |
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#ifdef HAVE_CONFIG_H |
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#include "config.h" |
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#endif |
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|
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#include <stdio.h> |
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#include <stdlib.h> |
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#include <string.h> |
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|
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#ifndef FIX_UNUSED |
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#define FIX_UNUSED(X) (void) (X) /* avoid warnings for unused params */ |
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#endif |
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|
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#include <getopt.h> |
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|
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#include "DynamicPropsCmd.h" |
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|
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const char *gengetopt_args_info_purpose = ""; |
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|
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const char *gengetopt_args_info_usage = "Usage: DynamicProps [OPTIONS]..."; |
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|
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const char *gengetopt_args_info_description = ""; |
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|
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const char *gengetopt_args_info_help[] = { |
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" -h, --help Print help and exit", |
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" -V, --version Print version and exit", |
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" -i, --input=filename input dump file", |
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" -o, --output=filename output file name", |
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" --sele1=selection script select first stuntdouble set", |
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" --sele2=selection script select second stuntdouble set (if sele2 is not \n set, use script from sele1)", |
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" --order=INT Lengendre Polynomial Order", |
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"\n Group: dynamicProps\n an option of this group is required", |
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" -r, --rcorr rmsd", |
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" -v, --vcorr velocity correlation function", |
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" -d, --dcorr dipole correlation function", |
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" -l, --lcorr Lengendre correlation function", |
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" --r_rcorr Radial rmsd", |
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" --thetacorr Angular rmsd", |
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" --drcorr Directional rmsd for particles with unit \n vectors", |
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" --helfandEcorr Helfand moment for thermal conductvity", |
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" --stresscorr Stress tensor correlation function", |
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0 |
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}; |
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|
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typedef enum {ARG_NO |
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, ARG_STRING |
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, ARG_INT |
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} cmdline_parser_arg_type; |
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|
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static |
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void clear_given (struct gengetopt_args_info *args_info); |
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static |
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void clear_args (struct gengetopt_args_info *args_info); |
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|
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static int |
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cmdline_parser_internal (int argc, char **argv, struct gengetopt_args_info *args_info, |
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struct cmdline_parser_params *params, const char *additional_error); |
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|
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static int |
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cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error); |
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|
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static char * |
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gengetopt_strdup (const char *s); |
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|
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static |
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void clear_given (struct gengetopt_args_info *args_info) |
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{ |
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args_info->help_given = 0 ; |
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args_info->version_given = 0 ; |
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args_info->input_given = 0 ; |
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args_info->output_given = 0 ; |
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args_info->sele1_given = 0 ; |
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args_info->sele2_given = 0 ; |
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args_info->order_given = 0 ; |
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args_info->rcorr_given = 0 ; |
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args_info->vcorr_given = 0 ; |
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args_info->dcorr_given = 0 ; |
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args_info->lcorr_given = 0 ; |
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args_info->r_rcorr_given = 0 ; |
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args_info->thetacorr_given = 0 ; |
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args_info->drcorr_given = 0 ; |
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args_info->helfandEcorr_given = 0 ; |
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args_info->stresscorr_given = 0 ; |
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args_info->dynamicProps_group_counter = 0 ; |
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} |
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|
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static |
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void clear_args (struct gengetopt_args_info *args_info) |
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{ |
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FIX_UNUSED (args_info); |
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args_info->input_arg = NULL; |
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args_info->input_orig = NULL; |
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args_info->output_arg = NULL; |
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args_info->output_orig = NULL; |
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args_info->sele1_arg = NULL; |
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args_info->sele1_orig = NULL; |
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args_info->sele2_arg = NULL; |
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args_info->sele2_orig = NULL; |
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args_info->order_orig = NULL; |
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|
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} |
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|
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static |
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void init_args_info(struct gengetopt_args_info *args_info) |
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{ |
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|
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|
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args_info->help_help = gengetopt_args_info_help[0] ; |
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args_info->version_help = gengetopt_args_info_help[1] ; |
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args_info->input_help = gengetopt_args_info_help[2] ; |
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args_info->output_help = gengetopt_args_info_help[3] ; |
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args_info->sele1_help = gengetopt_args_info_help[4] ; |
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args_info->sele2_help = gengetopt_args_info_help[5] ; |
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args_info->order_help = gengetopt_args_info_help[6] ; |
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args_info->rcorr_help = gengetopt_args_info_help[8] ; |
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args_info->vcorr_help = gengetopt_args_info_help[9] ; |
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args_info->dcorr_help = gengetopt_args_info_help[10] ; |
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args_info->lcorr_help = gengetopt_args_info_help[11] ; |
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args_info->r_rcorr_help = gengetopt_args_info_help[12] ; |
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args_info->thetacorr_help = gengetopt_args_info_help[13] ; |
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args_info->drcorr_help = gengetopt_args_info_help[14] ; |
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args_info->helfandEcorr_help = gengetopt_args_info_help[15] ; |
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args_info->stresscorr_help = gengetopt_args_info_help[16] ; |
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|
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} |
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|
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void |
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cmdline_parser_print_version (void) |
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{ |
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printf ("%s %s\n", |
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(strlen(CMDLINE_PARSER_PACKAGE_NAME) ? CMDLINE_PARSER_PACKAGE_NAME : CMDLINE_PARSER_PACKAGE), |
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CMDLINE_PARSER_VERSION); |
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} |
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|
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static void print_help_common(void) { |
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cmdline_parser_print_version (); |
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|
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if (strlen(gengetopt_args_info_purpose) > 0) |
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printf("\n%s\n", gengetopt_args_info_purpose); |
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|
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if (strlen(gengetopt_args_info_usage) > 0) |
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printf("\n%s\n", gengetopt_args_info_usage); |
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|
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printf("\n"); |
155 |
|
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if (strlen(gengetopt_args_info_description) > 0) |
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printf("%s\n\n", gengetopt_args_info_description); |
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} |
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|
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void |
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cmdline_parser_print_help (void) |
162 |
{ |
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int i = 0; |
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print_help_common(); |
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while (gengetopt_args_info_help[i]) |
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printf("%s\n", gengetopt_args_info_help[i++]); |
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} |
168 |
|
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void |
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cmdline_parser_init (struct gengetopt_args_info *args_info) |
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{ |
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clear_given (args_info); |
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clear_args (args_info); |
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init_args_info (args_info); |
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} |
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|
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void |
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cmdline_parser_params_init(struct cmdline_parser_params *params) |
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{ |
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if (params) |
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{ |
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params->override = 0; |
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params->initialize = 1; |
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params->check_required = 1; |
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params->check_ambiguity = 0; |
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params->print_errors = 1; |
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} |
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} |
189 |
|
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struct cmdline_parser_params * |
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cmdline_parser_params_create(void) |
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{ |
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struct cmdline_parser_params *params = |
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(struct cmdline_parser_params *)malloc(sizeof(struct cmdline_parser_params)); |
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cmdline_parser_params_init(params); |
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return params; |
197 |
} |
198 |
|
199 |
static void |
200 |
free_string_field (char **s) |
201 |
{ |
202 |
if (*s) |
203 |
{ |
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free (*s); |
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*s = 0; |
206 |
} |
207 |
} |
208 |
|
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|
210 |
static void |
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cmdline_parser_release (struct gengetopt_args_info *args_info) |
212 |
{ |
213 |
|
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free_string_field (&(args_info->input_arg)); |
215 |
free_string_field (&(args_info->input_orig)); |
216 |
free_string_field (&(args_info->output_arg)); |
217 |
free_string_field (&(args_info->output_orig)); |
218 |
free_string_field (&(args_info->sele1_arg)); |
219 |
free_string_field (&(args_info->sele1_orig)); |
220 |
free_string_field (&(args_info->sele2_arg)); |
221 |
free_string_field (&(args_info->sele2_orig)); |
222 |
free_string_field (&(args_info->order_orig)); |
223 |
|
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|
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|
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clear_given (args_info); |
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} |
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|
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|
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static void |
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write_into_file(FILE *outfile, const char *opt, const char *arg, const char *values[]) |
232 |
{ |
233 |
FIX_UNUSED (values); |
234 |
if (arg) { |
235 |
fprintf(outfile, "%s=\"%s\"\n", opt, arg); |
236 |
} else { |
237 |
fprintf(outfile, "%s\n", opt); |
238 |
} |
239 |
} |
240 |
|
241 |
|
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int |
243 |
cmdline_parser_dump(FILE *outfile, struct gengetopt_args_info *args_info) |
244 |
{ |
245 |
int i = 0; |
246 |
|
247 |
if (!outfile) |
248 |
{ |
249 |
fprintf (stderr, "%s: cannot dump options to stream\n", CMDLINE_PARSER_PACKAGE); |
250 |
return EXIT_FAILURE; |
251 |
} |
252 |
|
253 |
if (args_info->help_given) |
254 |
write_into_file(outfile, "help", 0, 0 ); |
255 |
if (args_info->version_given) |
256 |
write_into_file(outfile, "version", 0, 0 ); |
257 |
if (args_info->input_given) |
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write_into_file(outfile, "input", args_info->input_orig, 0); |
259 |
if (args_info->output_given) |
260 |
write_into_file(outfile, "output", args_info->output_orig, 0); |
261 |
if (args_info->sele1_given) |
262 |
write_into_file(outfile, "sele1", args_info->sele1_orig, 0); |
263 |
if (args_info->sele2_given) |
264 |
write_into_file(outfile, "sele2", args_info->sele2_orig, 0); |
265 |
if (args_info->order_given) |
266 |
write_into_file(outfile, "order", args_info->order_orig, 0); |
267 |
if (args_info->rcorr_given) |
268 |
write_into_file(outfile, "rcorr", 0, 0 ); |
269 |
if (args_info->vcorr_given) |
270 |
write_into_file(outfile, "vcorr", 0, 0 ); |
271 |
if (args_info->dcorr_given) |
272 |
write_into_file(outfile, "dcorr", 0, 0 ); |
273 |
if (args_info->lcorr_given) |
274 |
write_into_file(outfile, "lcorr", 0, 0 ); |
275 |
if (args_info->r_rcorr_given) |
276 |
write_into_file(outfile, "r_rcorr", 0, 0 ); |
277 |
if (args_info->thetacorr_given) |
278 |
write_into_file(outfile, "thetacorr", 0, 0 ); |
279 |
if (args_info->drcorr_given) |
280 |
write_into_file(outfile, "drcorr", 0, 0 ); |
281 |
if (args_info->helfandEcorr_given) |
282 |
write_into_file(outfile, "helfandEcorr", 0, 0 ); |
283 |
if (args_info->stresscorr_given) |
284 |
write_into_file(outfile, "stresscorr", 0, 0 ); |
285 |
|
286 |
|
287 |
i = EXIT_SUCCESS; |
288 |
return i; |
289 |
} |
290 |
|
291 |
int |
292 |
cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info) |
293 |
{ |
294 |
FILE *outfile; |
295 |
int i = 0; |
296 |
|
297 |
outfile = fopen(filename, "w"); |
298 |
|
299 |
if (!outfile) |
300 |
{ |
301 |
fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename); |
302 |
return EXIT_FAILURE; |
303 |
} |
304 |
|
305 |
i = cmdline_parser_dump(outfile, args_info); |
306 |
fclose (outfile); |
307 |
|
308 |
return i; |
309 |
} |
310 |
|
311 |
void |
312 |
cmdline_parser_free (struct gengetopt_args_info *args_info) |
313 |
{ |
314 |
cmdline_parser_release (args_info); |
315 |
} |
316 |
|
317 |
/** @brief replacement of strdup, which is not standard */ |
318 |
char * |
319 |
gengetopt_strdup (const char *s) |
320 |
{ |
321 |
char *result = 0; |
322 |
if (!s) |
323 |
return result; |
324 |
|
325 |
result = (char*)malloc(strlen(s) + 1); |
326 |
if (result == (char*)0) |
327 |
return (char*)0; |
328 |
strcpy(result, s); |
329 |
return result; |
330 |
} |
331 |
|
332 |
static void |
333 |
reset_group_dynamicProps(struct gengetopt_args_info *args_info) |
334 |
{ |
335 |
if (! args_info->dynamicProps_group_counter) |
336 |
return; |
337 |
|
338 |
args_info->rcorr_given = 0 ; |
339 |
args_info->vcorr_given = 0 ; |
340 |
args_info->dcorr_given = 0 ; |
341 |
args_info->lcorr_given = 0 ; |
342 |
args_info->r_rcorr_given = 0 ; |
343 |
args_info->thetacorr_given = 0 ; |
344 |
args_info->drcorr_given = 0 ; |
345 |
args_info->helfandEcorr_given = 0 ; |
346 |
args_info->stresscorr_given = 0 ; |
347 |
|
348 |
args_info->dynamicProps_group_counter = 0; |
349 |
} |
350 |
|
351 |
int |
352 |
cmdline_parser (int argc, char **argv, struct gengetopt_args_info *args_info) |
353 |
{ |
354 |
return cmdline_parser2 (argc, argv, args_info, 0, 1, 1); |
355 |
} |
356 |
|
357 |
int |
358 |
cmdline_parser_ext (int argc, char **argv, struct gengetopt_args_info *args_info, |
359 |
struct cmdline_parser_params *params) |
360 |
{ |
361 |
int result; |
362 |
result = cmdline_parser_internal (argc, argv, args_info, params, 0); |
363 |
|
364 |
if (result == EXIT_FAILURE) |
365 |
{ |
366 |
cmdline_parser_free (args_info); |
367 |
exit (EXIT_FAILURE); |
368 |
} |
369 |
|
370 |
return result; |
371 |
} |
372 |
|
373 |
int |
374 |
cmdline_parser2 (int argc, char **argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required) |
375 |
{ |
376 |
int result; |
377 |
struct cmdline_parser_params params; |
378 |
|
379 |
params.override = override; |
380 |
params.initialize = initialize; |
381 |
params.check_required = check_required; |
382 |
params.check_ambiguity = 0; |
383 |
params.print_errors = 1; |
384 |
|
385 |
result = cmdline_parser_internal (argc, argv, args_info, ¶ms, 0); |
386 |
|
387 |
if (result == EXIT_FAILURE) |
388 |
{ |
389 |
cmdline_parser_free (args_info); |
390 |
exit (EXIT_FAILURE); |
391 |
} |
392 |
|
393 |
return result; |
394 |
} |
395 |
|
396 |
int |
397 |
cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name) |
398 |
{ |
399 |
int result = EXIT_SUCCESS; |
400 |
|
401 |
if (cmdline_parser_required2(args_info, prog_name, 0) > 0) |
402 |
result = EXIT_FAILURE; |
403 |
|
404 |
if (result == EXIT_FAILURE) |
405 |
{ |
406 |
cmdline_parser_free (args_info); |
407 |
exit (EXIT_FAILURE); |
408 |
} |
409 |
|
410 |
return result; |
411 |
} |
412 |
|
413 |
int |
414 |
cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error) |
415 |
{ |
416 |
int error = 0; |
417 |
FIX_UNUSED (additional_error); |
418 |
|
419 |
/* checks for required options */ |
420 |
if (! args_info->input_given) |
421 |
{ |
422 |
fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); |
423 |
error = 1; |
424 |
} |
425 |
|
426 |
if (args_info->dynamicProps_group_counter == 0) |
427 |
{ |
428 |
fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required%s.\n", prog_name, args_info->dynamicProps_group_counter, (additional_error ? additional_error : "")); |
429 |
error = 1; |
430 |
} |
431 |
|
432 |
|
433 |
/* checks for dependences among options */ |
434 |
|
435 |
return error; |
436 |
} |
437 |
|
438 |
|
439 |
static char *package_name = 0; |
440 |
|
441 |
/** |
442 |
* @brief updates an option |
443 |
* @param field the generic pointer to the field to update |
444 |
* @param orig_field the pointer to the orig field |
445 |
* @param field_given the pointer to the number of occurrence of this option |
446 |
* @param prev_given the pointer to the number of occurrence already seen |
447 |
* @param value the argument for this option (if null no arg was specified) |
448 |
* @param possible_values the possible values for this option (if specified) |
449 |
* @param default_value the default value (in case the option only accepts fixed values) |
450 |
* @param arg_type the type of this option |
451 |
* @param check_ambiguity @see cmdline_parser_params.check_ambiguity |
452 |
* @param override @see cmdline_parser_params.override |
453 |
* @param no_free whether to free a possible previous value |
454 |
* @param multiple_option whether this is a multiple option |
455 |
* @param long_opt the corresponding long option |
456 |
* @param short_opt the corresponding short option (or '-' if none) |
457 |
* @param additional_error possible further error specification |
458 |
*/ |
459 |
static |
460 |
int update_arg(void *field, char **orig_field, |
461 |
unsigned int *field_given, unsigned int *prev_given, |
462 |
char *value, const char *possible_values[], |
463 |
const char *default_value, |
464 |
cmdline_parser_arg_type arg_type, |
465 |
int check_ambiguity, int override, |
466 |
int no_free, int multiple_option, |
467 |
const char *long_opt, char short_opt, |
468 |
const char *additional_error) |
469 |
{ |
470 |
char *stop_char = 0; |
471 |
const char *val = value; |
472 |
int found; |
473 |
char **string_field; |
474 |
FIX_UNUSED (field); |
475 |
|
476 |
stop_char = 0; |
477 |
found = 0; |
478 |
|
479 |
if (!multiple_option && prev_given && (*prev_given || (check_ambiguity && *field_given))) |
480 |
{ |
481 |
if (short_opt != '-') |
482 |
fprintf (stderr, "%s: `--%s' (`-%c') option given more than once%s\n", |
483 |
package_name, long_opt, short_opt, |
484 |
(additional_error ? additional_error : "")); |
485 |
else |
486 |
fprintf (stderr, "%s: `--%s' option given more than once%s\n", |
487 |
package_name, long_opt, |
488 |
(additional_error ? additional_error : "")); |
489 |
return 1; /* failure */ |
490 |
} |
491 |
|
492 |
FIX_UNUSED (default_value); |
493 |
|
494 |
if (field_given && *field_given && ! override) |
495 |
return 0; |
496 |
if (prev_given) |
497 |
(*prev_given)++; |
498 |
if (field_given) |
499 |
(*field_given)++; |
500 |
if (possible_values) |
501 |
val = possible_values[found]; |
502 |
|
503 |
switch(arg_type) { |
504 |
case ARG_INT: |
505 |
if (val) *((int *)field) = strtol (val, &stop_char, 0); |
506 |
break; |
507 |
case ARG_STRING: |
508 |
if (val) { |
509 |
string_field = (char **)field; |
510 |
if (!no_free && *string_field) |
511 |
free (*string_field); /* free previous string */ |
512 |
*string_field = gengetopt_strdup (val); |
513 |
} |
514 |
break; |
515 |
default: |
516 |
break; |
517 |
}; |
518 |
|
519 |
/* check numeric conversion */ |
520 |
switch(arg_type) { |
521 |
case ARG_INT: |
522 |
if (val && !(stop_char && *stop_char == '\0')) { |
523 |
fprintf(stderr, "%s: invalid numeric value: %s\n", package_name, val); |
524 |
return 1; /* failure */ |
525 |
} |
526 |
break; |
527 |
default: |
528 |
; |
529 |
}; |
530 |
|
531 |
/* store the original value */ |
532 |
switch(arg_type) { |
533 |
case ARG_NO: |
534 |
break; |
535 |
default: |
536 |
if (value && orig_field) { |
537 |
if (no_free) { |
538 |
*orig_field = value; |
539 |
} else { |
540 |
if (*orig_field) |
541 |
free (*orig_field); /* free previous string */ |
542 |
*orig_field = gengetopt_strdup (value); |
543 |
} |
544 |
} |
545 |
}; |
546 |
|
547 |
return 0; /* OK */ |
548 |
} |
549 |
|
550 |
|
551 |
int |
552 |
cmdline_parser_internal ( |
553 |
int argc, char **argv, struct gengetopt_args_info *args_info, |
554 |
struct cmdline_parser_params *params, const char *additional_error) |
555 |
{ |
556 |
int c; /* Character of the parsed option. */ |
557 |
|
558 |
int error = 0; |
559 |
struct gengetopt_args_info local_args_info; |
560 |
|
561 |
int override; |
562 |
int initialize; |
563 |
int check_required; |
564 |
int check_ambiguity; |
565 |
|
566 |
package_name = argv[0]; |
567 |
|
568 |
override = params->override; |
569 |
initialize = params->initialize; |
570 |
check_required = params->check_required; |
571 |
check_ambiguity = params->check_ambiguity; |
572 |
|
573 |
if (initialize) |
574 |
cmdline_parser_init (args_info); |
575 |
|
576 |
cmdline_parser_init (&local_args_info); |
577 |
|
578 |
optarg = 0; |
579 |
optind = 0; |
580 |
opterr = params->print_errors; |
581 |
optopt = '?'; |
582 |
|
583 |
while (1) |
584 |
{ |
585 |
int option_index = 0; |
586 |
|
587 |
static struct option long_options[] = { |
588 |
{ "help", 0, NULL, 'h' }, |
589 |
{ "version", 0, NULL, 'V' }, |
590 |
{ "input", 1, NULL, 'i' }, |
591 |
{ "output", 1, NULL, 'o' }, |
592 |
{ "sele1", 1, NULL, 0 }, |
593 |
{ "sele2", 1, NULL, 0 }, |
594 |
{ "order", 1, NULL, 0 }, |
595 |
{ "rcorr", 0, NULL, 'r' }, |
596 |
{ "vcorr", 0, NULL, 'v' }, |
597 |
{ "dcorr", 0, NULL, 'd' }, |
598 |
{ "lcorr", 0, NULL, 'l' }, |
599 |
{ "r_rcorr", 0, NULL, 0 }, |
600 |
{ "thetacorr", 0, NULL, 0 }, |
601 |
{ "drcorr", 0, NULL, 0 }, |
602 |
{ "helfandEcorr", 0, NULL, 0 }, |
603 |
{ "stresscorr", 0, NULL, 0 }, |
604 |
{ 0, 0, 0, 0 } |
605 |
}; |
606 |
|
607 |
c = getopt_long (argc, argv, "hVi:o:rvdl", long_options, &option_index); |
608 |
|
609 |
if (c == -1) break; /* Exit from `while (1)' loop. */ |
610 |
|
611 |
switch (c) |
612 |
{ |
613 |
case 'h': /* Print help and exit. */ |
614 |
cmdline_parser_print_help (); |
615 |
cmdline_parser_free (&local_args_info); |
616 |
exit (EXIT_SUCCESS); |
617 |
|
618 |
case 'V': /* Print version and exit. */ |
619 |
cmdline_parser_print_version (); |
620 |
cmdline_parser_free (&local_args_info); |
621 |
exit (EXIT_SUCCESS); |
622 |
|
623 |
case 'i': /* input dump file. */ |
624 |
|
625 |
|
626 |
if (update_arg( (void *)&(args_info->input_arg), |
627 |
&(args_info->input_orig), &(args_info->input_given), |
628 |
&(local_args_info.input_given), optarg, 0, 0, ARG_STRING, |
629 |
check_ambiguity, override, 0, 0, |
630 |
"input", 'i', |
631 |
additional_error)) |
632 |
goto failure; |
633 |
|
634 |
break; |
635 |
case 'o': /* output file name. */ |
636 |
|
637 |
|
638 |
if (update_arg( (void *)&(args_info->output_arg), |
639 |
&(args_info->output_orig), &(args_info->output_given), |
640 |
&(local_args_info.output_given), optarg, 0, 0, ARG_STRING, |
641 |
check_ambiguity, override, 0, 0, |
642 |
"output", 'o', |
643 |
additional_error)) |
644 |
goto failure; |
645 |
|
646 |
break; |
647 |
case 'r': /* rmsd. */ |
648 |
|
649 |
if (args_info->dynamicProps_group_counter && override) |
650 |
reset_group_dynamicProps (args_info); |
651 |
args_info->dynamicProps_group_counter += 1; |
652 |
|
653 |
if (update_arg( 0 , |
654 |
0 , &(args_info->rcorr_given), |
655 |
&(local_args_info.rcorr_given), optarg, 0, 0, ARG_NO, |
656 |
check_ambiguity, override, 0, 0, |
657 |
"rcorr", 'r', |
658 |
additional_error)) |
659 |
goto failure; |
660 |
|
661 |
break; |
662 |
case 'v': /* velocity correlation function. */ |
663 |
|
664 |
if (args_info->dynamicProps_group_counter && override) |
665 |
reset_group_dynamicProps (args_info); |
666 |
args_info->dynamicProps_group_counter += 1; |
667 |
|
668 |
if (update_arg( 0 , |
669 |
0 , &(args_info->vcorr_given), |
670 |
&(local_args_info.vcorr_given), optarg, 0, 0, ARG_NO, |
671 |
check_ambiguity, override, 0, 0, |
672 |
"vcorr", 'v', |
673 |
additional_error)) |
674 |
goto failure; |
675 |
|
676 |
break; |
677 |
case 'd': /* dipole correlation function. */ |
678 |
|
679 |
if (args_info->dynamicProps_group_counter && override) |
680 |
reset_group_dynamicProps (args_info); |
681 |
args_info->dynamicProps_group_counter += 1; |
682 |
|
683 |
if (update_arg( 0 , |
684 |
0 , &(args_info->dcorr_given), |
685 |
&(local_args_info.dcorr_given), optarg, 0, 0, ARG_NO, |
686 |
check_ambiguity, override, 0, 0, |
687 |
"dcorr", 'd', |
688 |
additional_error)) |
689 |
goto failure; |
690 |
|
691 |
break; |
692 |
case 'l': /* Lengendre correlation function. */ |
693 |
|
694 |
if (args_info->dynamicProps_group_counter && override) |
695 |
reset_group_dynamicProps (args_info); |
696 |
args_info->dynamicProps_group_counter += 1; |
697 |
|
698 |
if (update_arg( 0 , |
699 |
0 , &(args_info->lcorr_given), |
700 |
&(local_args_info.lcorr_given), optarg, 0, 0, ARG_NO, |
701 |
check_ambiguity, override, 0, 0, |
702 |
"lcorr", 'l', |
703 |
additional_error)) |
704 |
goto failure; |
705 |
|
706 |
break; |
707 |
|
708 |
case 0: /* Long option with no short option */ |
709 |
/* select first stuntdouble set. */ |
710 |
if (strcmp (long_options[option_index].name, "sele1") == 0) |
711 |
{ |
712 |
|
713 |
|
714 |
if (update_arg( (void *)&(args_info->sele1_arg), |
715 |
&(args_info->sele1_orig), &(args_info->sele1_given), |
716 |
&(local_args_info.sele1_given), optarg, 0, 0, ARG_STRING, |
717 |
check_ambiguity, override, 0, 0, |
718 |
"sele1", '-', |
719 |
additional_error)) |
720 |
goto failure; |
721 |
|
722 |
} |
723 |
/* select second stuntdouble set (if sele2 is not set, use script from sele1). */ |
724 |
else if (strcmp (long_options[option_index].name, "sele2") == 0) |
725 |
{ |
726 |
|
727 |
|
728 |
if (update_arg( (void *)&(args_info->sele2_arg), |
729 |
&(args_info->sele2_orig), &(args_info->sele2_given), |
730 |
&(local_args_info.sele2_given), optarg, 0, 0, ARG_STRING, |
731 |
check_ambiguity, override, 0, 0, |
732 |
"sele2", '-', |
733 |
additional_error)) |
734 |
goto failure; |
735 |
|
736 |
} |
737 |
/* Lengendre Polynomial Order. */ |
738 |
else if (strcmp (long_options[option_index].name, "order") == 0) |
739 |
{ |
740 |
|
741 |
|
742 |
if (update_arg( (void *)&(args_info->order_arg), |
743 |
&(args_info->order_orig), &(args_info->order_given), |
744 |
&(local_args_info.order_given), optarg, 0, 0, ARG_INT, |
745 |
check_ambiguity, override, 0, 0, |
746 |
"order", '-', |
747 |
additional_error)) |
748 |
goto failure; |
749 |
|
750 |
} |
751 |
/* Radial rmsd. */ |
752 |
else if (strcmp (long_options[option_index].name, "r_rcorr") == 0) |
753 |
{ |
754 |
|
755 |
if (args_info->dynamicProps_group_counter && override) |
756 |
reset_group_dynamicProps (args_info); |
757 |
args_info->dynamicProps_group_counter += 1; |
758 |
|
759 |
if (update_arg( 0 , |
760 |
0 , &(args_info->r_rcorr_given), |
761 |
&(local_args_info.r_rcorr_given), optarg, 0, 0, ARG_NO, |
762 |
check_ambiguity, override, 0, 0, |
763 |
"r_rcorr", '-', |
764 |
additional_error)) |
765 |
goto failure; |
766 |
|
767 |
} |
768 |
/* Angular rmsd. */ |
769 |
else if (strcmp (long_options[option_index].name, "thetacorr") == 0) |
770 |
{ |
771 |
|
772 |
if (args_info->dynamicProps_group_counter && override) |
773 |
reset_group_dynamicProps (args_info); |
774 |
args_info->dynamicProps_group_counter += 1; |
775 |
|
776 |
if (update_arg( 0 , |
777 |
0 , &(args_info->thetacorr_given), |
778 |
&(local_args_info.thetacorr_given), optarg, 0, 0, ARG_NO, |
779 |
check_ambiguity, override, 0, 0, |
780 |
"thetacorr", '-', |
781 |
additional_error)) |
782 |
goto failure; |
783 |
|
784 |
} |
785 |
/* Directional rmsd for particles with unit vectors. */ |
786 |
else if (strcmp (long_options[option_index].name, "drcorr") == 0) |
787 |
{ |
788 |
|
789 |
if (args_info->dynamicProps_group_counter && override) |
790 |
reset_group_dynamicProps (args_info); |
791 |
args_info->dynamicProps_group_counter += 1; |
792 |
|
793 |
if (update_arg( 0 , |
794 |
0 , &(args_info->drcorr_given), |
795 |
&(local_args_info.drcorr_given), optarg, 0, 0, ARG_NO, |
796 |
check_ambiguity, override, 0, 0, |
797 |
"drcorr", '-', |
798 |
additional_error)) |
799 |
goto failure; |
800 |
|
801 |
} |
802 |
/* Helfand moment for thermal conductvity. */ |
803 |
else if (strcmp (long_options[option_index].name, "helfandEcorr") == 0) |
804 |
{ |
805 |
|
806 |
if (args_info->dynamicProps_group_counter && override) |
807 |
reset_group_dynamicProps (args_info); |
808 |
args_info->dynamicProps_group_counter += 1; |
809 |
|
810 |
if (update_arg( 0 , |
811 |
0 , &(args_info->helfandEcorr_given), |
812 |
&(local_args_info.helfandEcorr_given), optarg, 0, 0, ARG_NO, |
813 |
check_ambiguity, override, 0, 0, |
814 |
"helfandEcorr", '-', |
815 |
additional_error)) |
816 |
goto failure; |
817 |
|
818 |
} |
819 |
/* Stress tensor correlation function. */ |
820 |
else if (strcmp (long_options[option_index].name, "stresscorr") == 0) |
821 |
{ |
822 |
|
823 |
if (args_info->dynamicProps_group_counter && override) |
824 |
reset_group_dynamicProps (args_info); |
825 |
args_info->dynamicProps_group_counter += 1; |
826 |
|
827 |
if (update_arg( 0 , |
828 |
0 , &(args_info->stresscorr_given), |
829 |
&(local_args_info.stresscorr_given), optarg, 0, 0, ARG_NO, |
830 |
check_ambiguity, override, 0, 0, |
831 |
"stresscorr", '-', |
832 |
additional_error)) |
833 |
goto failure; |
834 |
|
835 |
} |
836 |
|
837 |
break; |
838 |
case '?': /* Invalid option. */ |
839 |
/* `getopt_long' already printed an error message. */ |
840 |
goto failure; |
841 |
|
842 |
default: /* bug: option not considered. */ |
843 |
fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : "")); |
844 |
abort (); |
845 |
} /* switch */ |
846 |
} /* while */ |
847 |
|
848 |
if (args_info->dynamicProps_group_counter > 1) |
849 |
{ |
850 |
fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required%s.\n", argv[0], args_info->dynamicProps_group_counter, (additional_error ? additional_error : "")); |
851 |
error = 1; |
852 |
} |
853 |
|
854 |
|
855 |
|
856 |
if (check_required) |
857 |
{ |
858 |
error += cmdline_parser_required2 (args_info, argv[0], additional_error); |
859 |
} |
860 |
|
861 |
cmdline_parser_release (&local_args_info); |
862 |
|
863 |
if ( error ) |
864 |
return (EXIT_FAILURE); |
865 |
|
866 |
return 0; |
867 |
|
868 |
failure: |
869 |
|
870 |
cmdline_parser_release (&local_args_info); |
871 |
return (EXIT_FAILURE); |
872 |
} |