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#include "applications/dynamicProps/DynamicPropsCmd.h" |
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#include "applications/dynamicProps/DipoleCorrFunc.hpp" |
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#include "applications/dynamicProps/RMSD.hpp" |
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#include "applications/dynamicProps/RCorrFunc.hpp" |
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#include "applications/dynamicProps/VCorrFunc.hpp" |
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#include "applications/dynamicProps/LegendreCorrFunc.hpp" |
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#include "applications/dynamicProps/RadialRCorrFunc.hpp" |
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#include "applications/dynamicProps/ThetaCorrFunc.hpp" |
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#include "applications/dynamicProps/DirectionalRCorrFunc.hpp" |
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using namespace oopse; |
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//get the dumpfile name and meta-data file name |
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std::string dumpFileName = args_info.input_arg; |
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std::string mdFileName = dumpFileName.substr(0, dumpFileName.rfind(".")) + ".md"; |
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std::string sele1; |
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std::string sele2; |
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//parse md file and set up the system |
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SimCreator creator; |
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SimInfo* info = creator.createSim(mdFileName, false); |
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SimInfo* info = creator.createSim(dumpFileName, false); |
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TimeCorrFunc* corrFunc; |
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if (args_info.rmsd_given) { |
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corrFunc = new RMSD(info, dumpFileName, sele1, sele2); |
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} else if (args_info.dcorr_given){ |
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if (args_info.dcorr_given){ |
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corrFunc = new DipoleCorrFunc(info, dumpFileName, sele1, sele2); |
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} else if (args_info.rcorr_given) { |
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corrFunc = new RCorrFunc(info, dumpFileName, sele1, sele2); |
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} else if (args_info.r_rcorr_given) { |
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corrFunc = new RadialRCorrFunc(info, dumpFileName, sele1, sele2); |
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} else if (args_info.thetacorr_given) { |
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corrFunc = new ThetaCorrFunc(info, dumpFileName, sele1, sele2); |
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} else if (args_info.drcorr_given) { |
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corrFunc = new DirectionalRCorrFunc(info, dumpFileName, sele1, sele2); |
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} |
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else if (args_info.vcorr_given) { |
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corrFunc = new VCorrFunc(info, dumpFileName, sele1, sele2); |