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root/OpenMD/trunk/forceFields/Amber.frc
Revision: 1782
Committed: Wed Aug 22 02:28:28 2012 UTC (12 years, 9 months ago) by gezelter
File size: 101123 byte(s)
Log Message:
MERGE OpenMD development branch 1465:1781 into trunk

File Contents

# User Rev Content
1 gezelter 1278 begin Options
2 cli2 1289 Name "Amber"
3     vdW-14-scale 0.5
4     electrostatic-14-scale 0.83333333333333333
5 gezelter 1278 end Options
6 gezelter 1270
7     begin BaseAtomTypes
8     //number name mass (amu)
9 cli2 1289 C 12.01
10     N 14.01
11     O 16.0
12     S 32.06
13     P 30.97
14     H 1.008
15 gezelter 1270 Li+ 6.940
16     Na+ 22.990
17     K+ 39.100
18     Rb+ 85.470
19     Cs+ 132.910
20 gezelter 1278 Mg+2 24.305
21     Ca+2 40.080
22     Zn+2 65.400
23 gezelter 1270 Cl- 35.450
24 kstocke1 1526 F- 19.000
25     Br- 79.900
26     I- 126.900
27 gezelter 1363 EP 0.0
28 gezelter 1270 end BaseAtomTypes
29    
30    
31     begin AtomTypes
32     //name baseatomtype
33 cli2 1289 CT C
34     CA C
35     CM C
36     CC C
37     CV C
38     CW C
39     CR C
40     CB C
41     C* C
42     CN C
43     CK C
44     CQ C
45     NA N
46     NB N
47     NC N
48     N* N
49     N2 N
50     N3 N
51     OW O
52     OH O
53     OS O
54     O2 O
55     SH S
56     HW H
57     HO H
58     HS H
59     HA H
60     HC H
61     H1 H
62     H2 H
63     H3 H
64     HP H
65     H4 H
66     H5 H
67 gezelter 1270 GLY-N N
68     GLY-CA CT
69     GLY-C C
70     GLY-HN H
71     GLY-O O
72     GLY-HA H1
73     ALA-N N
74     ALA-CA CT
75     ALA-C C
76     ALA-HN H
77     ALA-O O
78     ALA-HA H1
79     ALA-CB CT
80     ALA-HB HC
81     VAL-N N
82     VAL-CA CT
83     VAL-C C
84     VAL-HN H
85     VAL-O O
86     VAL-HA H1
87     VAL-CB CT
88     VAL-HB HC
89 cli2 1289 VAL-CG CT
90     VAL-HG HC
91 gezelter 1270 LEU-N N
92     LEU-CA CT
93     LEU-C C
94     LEU-HN H
95     LEU-O O
96     LEU-HA H1
97     LEU-CB CT
98     LEU-HB HC
99     LEU-CG CT
100     LEU-HG HC
101 cli2 1289 LEU-CD CT
102     LEU-HD HC
103 gezelter 1270 ILE-N N
104     ILE-CA CT
105     ILE-C C
106     ILE-HN H
107     ILE-O O
108     ILE-HA H1
109     ILE-CB CT
110     ILE-HB HC
111     ILE-CG1 CT
112     ILE-HG1 HC
113     ILE-CG2 CT
114     ILE-HG2 HC
115     ILE-CD CT
116     ILE-HD HC
117     SER-N N
118     SER-CA CT
119     SER-C C
120     SER-HN H
121     SER-O O
122     SER-HA H1
123     SER-CB CT
124     SER-HB H1
125     SER-OG OH
126     SER-HG HO
127     THR-N N
128     THR-CA CT
129     THR-C C
130     THR-HN H
131     THR-O O
132     THR-HA H1
133     THR-CB CT
134     THR-HB H1
135     THR-OG1 OH
136     THR-HG1 HO
137     THR-CG2 CT
138     THR-HG2 HC
139     CYS-N N
140     CYS-CA CT
141     CYS-C C
142     CYS-HN H
143     CYS-O O
144     CYS-HA H1
145     CYS-CB CT
146     CYS-HB H1
147     CYS-SG SH
148     CYS-HG HS
149     CYX-N N
150     CYX-CA CT
151     CYX-C C
152     CYX-HN H
153     CYX-O O
154     CYX-HA H1
155     CYX-CB CT
156     CYX-HB H1
157     CYX-SG S
158     PRO-N N
159     PRO-CA CT
160     PRO-C C
161     PRO-O O
162     PRO-HA H1
163     PRO-CB CT
164     PRO-HB HC
165     PRO-CG CT
166     PRO-HG HC
167     PRO-CD CT
168     PRO-HD H1
169     PHE-N N
170     PHE-CA CT
171     PHE-C C
172     PHE-HN H
173     PHE-O O
174     PHE-HA H1
175     PHE-CB CT
176     PHE-HB HC
177     PHE-CG CA
178     PHE-CD CA
179     PHE-HD HA
180     PHE-CE CA
181     PHE-HE HA
182     PHE-CZ CA
183     PHE-HZ HA
184     TYR-N N
185     TYR-CA CT
186     TYR-C C
187     TYR-HN H
188     TYR-O O
189     TYR-HA H1
190     TYR-CB CT
191     TYR-HB HC
192     TYR-CG CA
193     TYR-CD CA
194     TYR-HD HA
195     TYR-CE CA
196     TYR-HE HA
197     TYR-CZ CA
198     TYR-OH OH
199 cli2 1289 TYR-HO HO
200 gezelter 1270 TRP-N N
201     TRP-CA CT
202     TRP-C C
203     TRP-HN H
204     TRP-O O
205     TRP-HA H1
206     TRP-CB CT
207     TRP-HB HC
208     TRP-CG C*
209     TRP-CD1 CW
210     TRP-HD1 H4
211     TRP-CD2 CB
212     TRP-NE1 NA
213     TRP-HE1 H
214     TRP-CE2 CN
215     TRP-CE3 CA
216     TRP-HE3 HA
217     TRP-CZ2 CA
218     TRP-HZ2 HA
219     TRP-CZ3 CA
220     TRP-HZ3 HA
221     TRP-CH2 CA
222     TRP-HH2 HA
223     HIS-N N
224     HIS-CA CT
225     HIS-C C
226     HIS-HN H
227     HIS-O O
228     HIS-HA H1
229     HIS-CB CT
230     HIS-HB HC
231     HIS-CG CC
232     HIS-ND1 NA
233     HIS-HD1 H
234     HIS-CD2 CW
235     HIS-HD2 H4
236     HIS-CE1 CR
237     HIS-HE1 H5
238     HIS-NE2 NA
239     HIS-HE2 H
240     HID-N N
241     HID-CA CT
242     HID-C C
243     HID-HN H
244     HID-O O
245     HID-HA H1
246     HID-CB CT
247     HID-HB HC
248     HID-CG CC
249     HID-ND1 NA
250     HID-HD1 H
251     HID-CD2 CV
252     HID-HD2 H4
253     HID-CE1 CR
254     HID-HE1 H5
255     HID-NE2 NB
256     HIE-N N
257     HIE-CA CT
258     HIE-C C
259     HIE-HN H
260     HIE-O O
261     HIE-HA H1
262     HIE-CB CT
263     HIE-HB HC
264     HIE-CG CC
265     HIE-ND1 NB
266     HIE-CD2 CW
267     HIE-HD2 H4
268     HIE-CE1 CR
269     HIE-HE1 H5
270     HIE-NE2 NA
271     HIE-HE2 H
272     ASP-N N
273     ASP-CA CT
274     ASP-C C
275     ASP-HN H
276     ASP-O O
277     ASP-HA H1
278     ASP-CB CT
279     ASP-HB HC
280     ASP-CG C
281     ASP-OD O2
282     ASN-N N
283     ASN-CA CT
284     ASN-C C
285     ASN-HN H
286     ASN-O O
287     ASN-HA H1
288     ASN-CB CT
289     ASN-HB HC
290     ASN-CG C
291     ASN-OD1 O
292     ASN-ND2 N
293     ASN-HD2 H
294     GLU-N N
295     GLU-CA CT
296     GLU-C C
297     GLU-HN H
298     GLU-O O
299     GLU-HA H1
300     GLU-CB CT
301     GLU-HB HC
302     GLU-CG CT
303     GLU-HG HC
304     GLU-CD C
305     GLU-OE O2
306     GLN-N N
307     GLN-CA CT
308     GLN-C C
309     GLN-HN H
310     GLN-O O
311     GLN-HA H1
312     GLN-CB CT
313     GLN-HB HC
314     GLN-CG CT
315     GLN-HG HC
316     GLN-CD C
317     GLN-OE1 O
318     GLN-NE2 N
319     GLN-HE2 H
320     MET-N N
321     MET-CA CT
322     MET-C C
323     MET-HN H
324     MET-O O
325     MET-HA H1
326     MET-CB CT
327     MET-HB HC
328     MET-CG CT
329     MET-HG H1
330     MET-SD S
331     MET-CE CT
332     MET-HE H1
333     LYS-N N
334     LYS-CA CT
335     LYS-C C
336     LYS-HN H
337     LYS-O O
338     LYS-HA H1
339     LYS-CB CT
340     LYS-HB HC
341     LYS-CG CT
342     LYS-HG HC
343     LYS-CD CT
344     LYS-HD HC
345     LYS-CE CT
346     LYS-HE HP
347     LYS-NZ N3
348     LYS-HZ H
349     ARG-N N
350     ARG-CA CT
351     ARG-C C
352     ARG-HN H
353     ARG-O O
354     ARG-HA H1
355     ARG-CB CT
356     ARG-HB HC
357     ARG-CG CT
358     ARG-HG HC
359     ARG-CD CT
360     ARG-HD H1
361     ARG-NE N2
362     ARG-HE H
363     ARG-CZ CA
364     ARG-NH N2
365     ARG-HH H
366     ORN-N N
367     ORN-CA CT
368     ORN-C C
369     ORN-HN H
370     ORN-O O
371     ORN-HA H1
372     ORN-CB CT
373     ORN-HB HC
374     ORN-CG CT
375     ORN-HG HC
376     ORN-CD CT
377     ORN-HD HP
378     ORN-NE N3
379     ORN-HE H
380     MAA-N N
381     MAA-CA CT
382     MAA-C C
383     MAA-HN H
384     MAA-O O
385     MAA-CB CT
386     MAA-HB HC
387     PCA-N N
388     PCA-CA CT
389     PCA-C C
390     PCA-HN H
391     PCA-O O
392     PCA-HA H1
393     PCA-CB CT
394     PCA-HB HC
395     PCA-CG CT
396     PCA-HG HC
397     PCA-CD C
398     PCA-OE O
399     FOR-C C
400     FOR-H H
401     FOR-O O
402     ACE-CA CT
403     ACE-HA HC
404     ACE-C C
405     ACE-O O
406 gezelter 1278 C-Term-N N
407     C-Term-H H
408     N-MeAmide-N N
409     N-MeAmide-H H
410     N-MeAmide-C CT
411     N-MeAmide-H1 H1
412 gezelter 1270 NGLY-N N3
413     NGLY-CA CT
414     NGLY-C C
415     NGLY-HN H
416     NGLY-O O
417     NGLY-HA H1
418     NALA-N N3
419     NALA-CA CT
420     NALA-C C
421     NALA-HN H
422     NALA-O O
423     NALA-HA H1
424     NVAL-N N3
425     NVAL-CA CT
426     NVAL-C C
427     NVAL-HN H
428     NVAL-O O
429     NVAL-HA H1
430     NLEU-N N3
431     NLEU-CA CT
432     NLEU-C C
433     NLEU-HN H
434     NLEU-O O
435     NLEU-HA H1
436     NILE-N N3
437     NILE-CA CT
438     NILE-C C
439     NILE-HN H
440     NILE-O O
441     NILE-HA H1
442     NSER-N N3
443     NSER-CA CT
444     NSER-C C
445     NSER-HN H
446     NSER-O O
447     NSER-HA H1
448     NTHR-N N3
449     NTHR-CA CT
450     NTHR-C C
451     NTHR-HN H
452     NTHR-O O
453     NTHR-HA H1
454     NCYS-N N3
455     NCYS-CA CT
456     NCYS-C C
457     NCYS-HN H
458     NCYS-O O
459     NCYS-HA H1
460     NCYX-N N3
461     NCYX-CA CT
462     NCYX-C C
463     NCYX-HN H
464     NCYX-O O
465     NCYX-HA H1
466     NPRO-N N3
467     NPRO-CA CT
468     NPRO-C C
469     NPRO-HN H
470     NPRO-O O
471     NPRO-HA H1
472     NPRO-CD CT
473     NPRO-HD HP
474     NPHE-N N3
475     NPHE-CA CT
476     NPHE-C C
477     NPHE-HN H
478     NPHE-O O
479     NPHE-HA H1
480     NTYR-N N3
481     NTYR-CA CT
482     NTYR-C C
483     NTYR-HN H
484     NTYR-O O
485     NTYR-HA H1
486     NTRP-N N3
487     NTRP-CA CT
488     NTRP-C C
489     NTRP-HN H
490     NTRP-O O
491     NTRP-HA H1
492     NHIS-N N3
493     NHIS-CA CT
494     NHIS-C C
495     NHIS-HN H
496     NHIS-O O
497     NHIS-HA H1
498     NHID-N N3
499     NHID-CA CT
500     NHID-C C
501     NHID-HN H
502     NHID-O O
503     NHID-HA H1
504     NHIE-N N3
505     NHIE-CA CT
506     NHIE-C C
507     NHIE-HN H
508     NHIE-O O
509     NHIE-HA H1
510     NASP-N N3
511     NASP-CA CT
512     NASP-C C
513     NASP-HN H
514     NASP-O O
515     NASP-HA H1
516     NASN-N N3
517     NASN-CA CT
518     NASN-C C
519     NASN-HN H
520     NASN-O O
521     NASN-HA H1
522     NGLU-N N3
523     NGLU-CA CT
524     NGLU-C C
525     NGLU-HN H
526     NGLU-O O
527     NGLU-HA H1
528 cli2 1289 NGLN-N N3
529     NGLN-CA CT
530     NGLN-C C
531     NGLN-HN H
532     NGLN-O O
533     NGLN-HA H1
534     NGLN-CB CT
535     NGLN-HB HC
536     NGLN-CG CT
537     NGLN-HG HC
538     NGLN-CD C
539     NGLN-OE1 O
540     NGLN-NE2 N
541     NGLN-HE2 H
542 gezelter 1270 NMET-N N3
543     NMET-CA CT
544     NMET-C C
545     NMET-HN H
546     NMET-O O
547     NMET-HA H1
548     NLYS-N N3
549     NLYS-CA CT
550     NLYS-C C
551     NLYS-HN H
552     NLYS-O O
553     NLYS-HA H1
554     NARG-N N3
555     NARG-CA CT
556     NARG-C C
557     NARG-HN H
558     NARG-O O
559     NARG-HA H1
560     NORN-N N3
561     NORN-CA CT
562     NORN-C C
563     NORN-HN H
564     NORN-O O
565     NORN-HA H1
566     NAIB-N N3
567     NAIB-CA CT
568     NAIB-C C
569     NAIB-HN H
570     NAIB-O O
571     CGLY-N N
572     CGLY-CA CT
573     CGLY-C C
574     CGLY-HN H
575     CGLY-OXT O2
576     CGLY-HA H1
577     CALA-N N
578     CALA-CA CT
579     CALA-C C
580     CALA-HN H
581     CALA-OXT O2
582     CALA-HA H1
583     CVAL-N N
584     CVAL-CA CT
585     CVAL-C C
586     CVAL-HN H
587     CVAL-OXT O2
588     CVAL-HA H1
589     CLEU-N N
590     CLEU-CA CT
591     CLEU-C C
592     CLEU-HN H
593     CLEU-OXT O2
594     CLEU-HA H1
595     CILE-N N
596     CILE-CA CT
597     CILE-C C
598     CILE-HN H
599     CILE-OXT O2
600     CILE-HA H1
601     CSER-N N
602     CSER-CA CT
603     CSER-C C
604     CSER-HN H
605     CSER-OXT O2
606     CSER-HA H1
607     CTHR-N N
608     CTHR-CA CT
609     CTHR-C C
610     CTHR-HN H
611     CTHR-OXT O2
612     CTHR-HA H1
613     CCYS-N N
614     CCYS-CA CT
615     CCYS-C C
616     CCYS-HN H
617     CCYS-OXT O2
618     CCYS-HA H1
619     CCYX-N N
620     CCYX-CA CT
621     CCYX-C C
622     CCYX-HN H
623     CCYX-OXT O2
624     CCYX-HA H1
625     CPRO-N N
626     CPRO-CA CT
627     CPRO-C C
628     CPRO-OXT O2
629 cli2 1289 CPRO-O O
630 gezelter 1270 CPRO-HA H1
631 cli2 1289 CPRO-CB CT
632     CPRO-HB HC
633     CPRO-CG CT
634     CPRO-HG HC
635     CPRO-CD CT
636     CPRO-HD H1
637 gezelter 1270 CPHE-N N
638     CPHE-CA CT
639     CPHE-C C
640     CPHE-HN H
641     CPHE-OXT O2
642     CPHE-HA H1
643     CTYR-N N
644     CTYR-CA CT
645     CTYR-C C
646     CTYR-HN H
647     CTYR-OXT O2
648     CTYR-HA H1
649     CTRP-N N
650     CTRP-CA CT
651     CTRP-C C
652     CTRP-HN H
653     CTRP-OXT O2
654     CTRP-HA H1
655     CHIS-N N
656     CHIS-CA CT
657     CHIS-C C
658     CHIS-HN H
659     CHIS-OXT O2
660     CHIS-HA H1
661     CHID-N N
662     CHID-CA CT
663     CHID-C C
664     CHID-HN H
665     CHID-OXT O2
666     CHID-HA H1
667     CHIE-N N
668     CHIE-CA CT
669     CHIE-C C
670     CHIE-HN H
671     CHIE-OXT O2
672     CHIE-HA H1
673     CASP-N N
674     CASP-CA CT
675     CASP-C C
676     CASP-HN H
677     CASP-OXT O2
678     CASP-HA H1
679     CASN-N N
680     CASN-CA CT
681     CASN-C C
682     CASN-HN H
683     CASN-OXT O2
684     CASN-HA H1
685     CGLU-N N
686     CGLU-CA CT
687     CGLU-C C
688     CGLU-HN H
689     CGLU-OXT O2
690     CGLU-HA H1
691     CGLN-N N
692     CGLN-CA CT
693     CGLN-C C
694     CGLN-HN H
695     CGLN-OXT O2
696     CGLN-HA H1
697     CMET-N N
698     CMET-CA CT
699     CMET-C C
700     CMET-HN H
701     CMET-OXT O2
702     CMET-HA H1
703     CLYS-N N
704     CLYS-CA CT
705     CLYS-C C
706     CLYS-HN H
707     CLYS-OXT O2
708     CLYS-HA H1
709     CARG-N N
710     CARG-CA CT
711     CARG-C C
712     CARG-HN H
713     CARG-OXT O2
714     CARG-HA H1
715     CORN-N N
716     CORN-CA CT
717     CORN-C C
718     CORN-HN H
719     CORN-OXT O2
720     CORN-HA H1
721     CAIB-N N
722     CAIB-CA CT
723     CAIB-C C
724     CAIB-HN H
725     CAIB-OXT O2
726     RA-O5' OS
727     RA-C5' CT
728     RA-H5'1 H1
729     RA-H5'2 H1
730     RA-C4' CT
731     RA-H4' H1
732     RA-O4' OS
733     RA-C1' CT
734     RA-H1' H2
735     RA-C3' CT
736     RA-H3' H1
737     RA-C2' CT
738     RA-H2'1 H1
739     RA-O2' OH
740     RA-HO'2 HO
741     RA-O3' OS
742     RA-N9 N*
743     RA-C4 CB
744     RA-C5 CB
745     RA-N7 NB
746     RA-C8 CK
747     RA-N3 NC
748     RA-C2 CQ
749     RA-N1 NC
750     RA-C6 CA
751     RA-H2 H5
752     RA-N6 N2
753     RA-H61 H
754     RA-H62 H
755     RA-H8 H5
756     RG-O5' OS
757     RG-C5' CT
758     RG-H5'1 H1
759     RG-H5'2 H1
760     RG-C4' CT
761     RG-H4' H1
762     RG-O4' OS
763     RG-C1' CT
764     RG-H1' H2
765     RG-C3' CT
766     RG-H3' H1
767     RG-C2' CT
768     RG-H2'1 H1
769     RG-O2' OH
770     RG-HO'2 HO
771     RG-O3' OS
772     RG-N9 N*
773     RG-C4 CB
774     RG-C5 CB
775     RG-N7 NB
776     RG-C8 CK
777     RG-N3 NC
778     RG-C2 CA
779     RG-N1 NA
780     RG-C6 C
781     RG-H1 H
782     RG-N2 N2
783     RG-H21 H
784     RG-H22 H
785     RG-O6 O
786     RG-H8 H5
787     RC-O5' OS
788     RC-C5' CT
789     RC-H5'1 H1
790     RC-H5'2 H1
791     RC-C4' CT
792     RC-H4' H1
793     RC-O4' OS
794     RC-C1' CT
795     RC-H1' H2
796     RC-C3' CT
797     RC-H3' H1
798     RC-C2' CT
799     RC-H2'1 H1
800     RC-O2' OH
801     RC-HO'2 HO
802     RC-O3' OS
803     RC-N1 N*
804     RC-C2 C
805     RC-N3 NC
806     RC-C4 CA
807     RC-C5 CM
808     RC-C6 CM
809     RC-O2 O
810     RC-N4 N2
811     RC-H41 H
812     RC-H42 H
813     RC-H5 HA
814     RC-H6 H4
815     RU-O5' OS
816     RU-C5' CT
817     RU-H5'1 H1
818     RU-H5'2 H1
819     RU-C4' CT
820     RU-H4' H1
821     RU-O4' OS
822     RU-C1' CT
823     RU-H1' H2
824     RU-C3' CT
825     RU-H3' H1
826     RU-C2' CT
827     RU-H2'1 H1
828     RU-O2' OH
829     RU-HO'2 HO
830     RU-O3' OS
831     RU-N1 N*
832     RU-C2 C
833     RU-N3 NA
834     RU-C4 C
835     RU-C5 CM
836     RU-C6 CM
837     RU-O2 O
838     RU-H3 H
839     RU-O4 O
840     RU-H5 HA
841     RU-H6 H4
842     DA-O5' OS
843     DA-C5' CT
844     DA-H5'1 H1
845     DA-H5'2 H1
846     DA-C4' CT
847     DA-H4' H1
848     DA-O4' OS
849     DA-C1' CT
850     DA-H1' H2
851     DA-C3' CT
852     DA-H3' H1
853     DA-C2' CT
854     DA-H2'1 HC
855     DA-H2'2 HC
856     DA-O3' OS
857     DA-N9 N*
858     DA-C4 CB
859     DA-C5 CB
860     DA-N7 NB
861     DA-C8 CK
862     DA-N3 NC
863     DA-C2 CQ
864     DA-N1 NC
865     DA-C6 CA
866     DA-H2 H5
867     DA-N6 N2
868     DA-H61 H
869     DA-H62 H
870     DA-H8 H5
871     DG-O5' OS
872     DG-C5' CT
873     DG-H5'1 H1
874     DG-H5'2 H1
875     DG-C4' CT
876     DG-H4' H1
877     DG-O4' OS
878     DG-C1' CT
879     DG-H1' H2
880     DG-C3' CT
881     DG-H3' H1
882     DG-C2' CT
883     DG-H2'1 HC
884     DG-H2'2 HC
885     DG-O3' OS
886     DG-N9 N*
887     DG-C4 CB
888     DG-C5 CB
889     DG-N7 NB
890     DG-C8 CK
891     DG-N3 NC
892     DG-C2 CA
893     DG-N1 NA
894     DG-C6 C
895     DG-H1 H
896     DG-N2 N2
897     DG-H21 H
898     DG-H22 H
899     DG-O6 O
900     DG-H8 H5
901     DC-O5' OS
902     DC-C5' CT
903     DC-H5'1 H1
904     DC-H5'2 H1
905     DC-C4' CT
906     DC-H4' H1
907     DC-O4' OS
908     DC-C1' CT
909     DC-H1' H2
910     DC-C3' CT
911     DC-H3' H1
912     DC-C2' CT
913     DC-H2'1 HC
914     DC-H2'2 HC
915     DC-O3' OS
916     DC-N1 N*
917     DC-C2 C
918     DC-N3 NC
919     DC-C4 CA
920     DC-C5 CM
921     DC-C6 CM
922     DC-O2 O
923     DC-N4 N2
924     DC-H41 H
925     DC-H42 H
926     DC-H5 HA
927     DC-H6 H4
928     DT-O5' OS
929     DT-C5' CT
930     DT-H5'1 H1
931     DT-H5'2 H1
932     DT-C4' CT
933     DT-H4' H1
934     DT-O4' OS
935     DT-C1' CT
936     DT-H1' H2
937     DT-C3' CT
938     DT-H3' H1
939     DT-C2' CT
940     DT-H2'1 HC
941     DT-H2'2 HC
942     DT-O3' OS
943     DT-N1 N*
944     DT-C2 C
945     DT-N3 NA
946     DT-C4 C
947     DT-C5 CM
948     DT-C6 CM
949     DT-O2 O
950     DT-H3 H
951     DT-O4 O
952     DT-C7 CT
953     DT-H7 HC
954     DT-H6 H4
955 gezelter 1278 R-Phosphodiester-P P
956     R-Phosphodiester-O O2
957 gezelter 1270 R5H-O5' OH
958     R5H-H5T HO
959     R5P-O5' OS
960     R5P-P P
961     R5P-OP O2
962     R3H-O3' OH
963     R3H-H3T HO
964     R3P-O3' OS
965     R3P-P P
966     R3P-OP O2
967 gezelter 1278 D-Phosphodiester-P P
968     D-Phosphodiester-O O2
969 gezelter 1270 D5H-O5' OH
970     D5H-H5T HO
971     D5P-O5' OS
972     D5P-P P
973     D5P-OP O2
974     D3H-O3' OH
975     D3H-H3T HO
976     D3P-O3' OS
977     D3P-P P
978     D3P-OP O2
979 gezelter 1278 TIP3P-O OW
980     TIP3P-H HW
981 gezelter 1363 O_TIP3P OW
982     O_TIP4P OW
983     O_TIP4P-Ew OW
984     O_TIP5P OW
985     O_TIP5P-E OW
986     O_SPCE OW
987 gezelter 1782 O_SPC OW
988     O_POL3 OW
989 gezelter 1363 H_TIP3P HW
990     H_TIP4P HW
991     H_TIP4P-Ew HW
992     H_TIP5P HW
993     H_SPCE HW
994     H_SPC HW
995 gezelter 1782 H_POL3 HW
996 gezelter 1363 EP_TIP4P EP
997     EP_TIP4P-Ew EP
998     EP_TIP5P EP
999 gezelter 1270 end AtomTypes
1000    
1001    
1002     begin ChargeAtomTypes
1003     //name charge
1004 gezelter 1563 HO 0.435
1005     OH -0.7
1006 gezelter 1418 O2 -0.5
1007     C 0.55
1008 gezelter 1270 GLY-N -0.4157
1009     GLY-CA -0.0252
1010     GLY-C 0.5973
1011     GLY-HN 0.2719
1012     GLY-O -0.5679
1013     GLY-HA 0.0698
1014     ALA-N -0.4157
1015     ALA-CA 0.0337
1016     ALA-C 0.5973
1017     ALA-HN 0.2719
1018     ALA-O -0.5679
1019     ALA-HA 0.0823
1020     ALA-CB -0.1825
1021     ALA-HB 0.0603
1022     VAL-N -0.4157
1023     VAL-CA -0.0875
1024     VAL-C 0.5973
1025     VAL-HN 0.2719
1026     VAL-O -0.5679
1027     VAL-HA 0.0969
1028     VAL-CB 0.2985
1029     VAL-HB -0.0297
1030 cli2 1289 VAL-CG -0.3192
1031     VAL-HG 0.0791
1032 gezelter 1270 LEU-N -0.4157
1033     LEU-CA -0.0518
1034     LEU-C 0.5973
1035     LEU-HN 0.2719
1036     LEU-O -0.5679
1037     LEU-HA 0.0922
1038     LEU-CB -0.1102
1039     LEU-HB 0.0457
1040     LEU-CG 0.3531
1041     LEU-HG -0.0361
1042 cli2 1289 LEU-CD -0.4121
1043     LEU-HD 0.1000
1044 gezelter 1270 ILE-N -0.4157
1045     ILE-CA -0.0597
1046     ILE-C 0.5973
1047     ILE-HN 0.2719
1048     ILE-O -0.5679
1049     ILE-HA 0.0869
1050     ILE-CB 0.1303
1051     ILE-HB 0.0187
1052     ILE-CG1 -0.0430
1053     ILE-HG1 0.0236
1054     ILE-CG2 -0.3204
1055     ILE-HG2 0.0882
1056     ILE-CD -0.0660
1057     ILE-HD 0.0186
1058     SER-N -0.4157
1059     SER-CA -0.0249
1060     SER-C 0.5973
1061     SER-HN 0.2719
1062     SER-O -0.5679
1063     SER-HA 0.0843
1064     SER-CB 0.2117
1065     SER-HB 0.0352
1066     SER-OG -0.6546
1067     SER-HG 0.4275
1068     THR-N -0.4157
1069     THR-CA -0.0389
1070     THR-C 0.5973
1071     THR-HN 0.2719
1072     THR-O -0.5679
1073     THR-HA 0.1007
1074     THR-CB 0.3654
1075     THR-HB 0.0043
1076     THR-OG1 -0.6761
1077     THR-HG1 0.4102
1078     THR-CG2 -0.2438
1079     THR-HG2 0.0642
1080     CYS-N -0.4157
1081     CYS-CA 0.0213
1082     CYS-C 0.5973
1083     CYS-HN 0.2719
1084     CYS-O -0.5679
1085     CYS-HA 0.1124
1086     CYS-CB -0.1231
1087     CYS-HB 0.1112
1088     CYS-SG -0.3119
1089     CYS-HG 0.1933
1090     CYX-N -0.4157
1091     CYX-CA 0.0429
1092     CYX-C 0.5973
1093     CYX-HN 0.2719
1094     CYX-O -0.5679
1095     CYX-HA 0.0766
1096     CYX-CB -0.0790
1097     CYX-HB 0.0910
1098     CYX-SG -0.1081
1099     PRO-N -0.2548
1100     PRO-CA -0.0266
1101     PRO-C 0.5896
1102     PRO-O -0.5748
1103     PRO-HA 0.0641
1104     PRO-CB -0.0070
1105     PRO-HB 0.0253
1106     PRO-CG 0.0189
1107     PRO-HG 0.0213
1108     PRO-CD 0.0192
1109     PRO-HD 0.0391
1110     PHE-N -0.4157
1111     PHE-CA -0.0024
1112     PHE-C 0.5973
1113     PHE-HN 0.2719
1114     PHE-O -0.5679
1115     PHE-HA 0.0978
1116     PHE-CB -0.0343
1117     PHE-HB 0.0295
1118     PHE-CG 0.0118
1119     PHE-CD -0.1256
1120     PHE-HD 0.1330
1121     PHE-CE -0.1704
1122     PHE-HE 0.1430
1123     PHE-CZ -0.1072
1124     PHE-HZ 0.1297
1125     TYR-N -0.4157
1126     TYR-CA -0.0014
1127     TYR-C 0.5973
1128     TYR-HN 0.2719
1129     TYR-O -0.5679
1130     TYR-HA 0.0876
1131     TYR-CB -0.0152
1132     TYR-HB 0.0295
1133     TYR-CG -0.0011
1134     TYR-CD -0.1906
1135     TYR-HD 0.1699
1136     TYR-CE -0.2341
1137     TYR-HE 0.1656
1138     TYR-CZ 0.3226
1139     TYR-OH -0.5579
1140 cli2 1289 TYR-HO 0.3992
1141 gezelter 1270 TRP-N -0.4157
1142     TRP-CA -0.0275
1143     TRP-C 0.5973
1144     TRP-HN 0.2719
1145     TRP-O -0.5679
1146     TRP-HA 0.1123
1147     TRP-CB -0.0050
1148     TRP-HB 0.0339
1149     TRP-CG -0.1415
1150     TRP-CD1 -0.1638
1151     TRP-HD1 0.2062
1152     TRP-CD2 0.1243
1153     TRP-NE1 -0.3418
1154     TRP-HE1 0.3412
1155     TRP-CE2 0.1380
1156     TRP-CE3 -0.2387
1157     TRP-HE3 0.1700
1158     TRP-CZ2 -0.2601
1159     TRP-HZ2 0.1572
1160     TRP-CZ3 -0.1972
1161     TRP-HZ3 0.1447
1162     TRP-CH2 -0.1134
1163     TRP-HH2 0.1417
1164     HIS-N -0.3479
1165     HIS-CA -0.1354
1166     HIS-C 0.7341
1167     HIS-HN 0.2747
1168     HIS-O -0.5894
1169     HIS-HA 0.1212
1170     HIS-CB -0.0414
1171     HIS-HB 0.0810
1172     HIS-CG -0.0012
1173     HIS-ND1 -0.1513
1174     HIS-HD1 0.3866
1175     HIS-CD2 -0.1141
1176     HIS-HD2 0.2317
1177     HIS-CE1 -0.0170
1178     HIS-HE1 0.2681
1179     HIS-NE2 -0.1718
1180     HIS-HE2 0.3911
1181     HID-N -0.4157
1182     HID-CA 0.0188
1183     HID-C 0.5973
1184     HID-HN 0.2719
1185     HID-O -0.5679
1186     HID-HA 0.0881
1187     HID-CB -0.0462
1188     HID-HB 0.0402
1189     HID-CG -0.0266
1190     HID-ND1 -0.3811
1191     HID-HD1 0.3649
1192     HID-CD2 0.1292
1193     HID-HD2 0.1147
1194     HID-CE1 0.2057
1195     HID-HE1 0.1392
1196     HID-NE2 -0.5727
1197     HIE-N -0.4157
1198     HIE-CA -0.0581
1199     HIE-C 0.5973
1200     HIE-HN 0.2719
1201     HIE-O -0.5679
1202     HIE-HA 0.1360
1203     HIE-CB -0.0074
1204     HIE-HB 0.0367
1205     HIE-CG 0.1868
1206     HIE-ND1 -0.5432
1207     HIE-CD2 -0.2207
1208     HIE-HD2 0.1862
1209     HIE-CE1 0.1635
1210     HIE-HE1 0.1435
1211     HIE-NE2 -0.2795
1212     HIE-HE2 0.3339
1213     ASP-N -0.5163
1214     ASP-CA 0.0381
1215     ASP-C 0.5366
1216     ASP-HN 0.2936
1217     ASP-O -0.5819
1218     ASP-HA 0.0880
1219     ASP-CB -0.0303
1220     ASP-HB -0.0122
1221     ASP-CG 0.7994
1222     ASP-OD -0.8014
1223     ASN-N -0.4157
1224     ASN-CA 0.0143
1225     ASN-C 0.5973
1226     ASN-HN 0.2719
1227     ASN-O -0.5679
1228     ASN-HA 0.1048
1229     ASN-CB -0.2041
1230     ASN-HB 0.0797
1231     ASN-CG 0.7130
1232     ASN-OD1 -0.5931
1233     ASN-ND2 -0.9191
1234     ASN-HD2 0.4196
1235     GLU-N -0.5163
1236     GLU-CA 0.0397
1237     GLU-C 0.5366
1238     GLU-HN 0.2936
1239     GLU-O -0.5819
1240     GLU-HA 0.1105
1241     GLU-CB 0.0560
1242     GLU-HB -0.0173
1243     GLU-CG 0.0136
1244     GLU-HG -0.0425
1245     GLU-CD 0.8054
1246     GLU-OE -0.8188
1247     GLN-N -0.4157
1248     GLN-CA -0.0031
1249     GLN-C 0.5973
1250     GLN-HN 0.2719
1251     GLN-O -0.5679
1252     GLN-HA 0.0850
1253     GLN-CB -0.0036
1254     GLN-HB 0.0171
1255     GLN-CG -0.0645
1256     GLN-HG 0.0352
1257     GLN-CD 0.6951
1258     GLN-OE1 -0.6086
1259     GLN-NE2 -0.9407
1260     GLN-HE2 0.4251
1261     MET-N -0.4157
1262     MET-CA -0.0237
1263     MET-C 0.5973
1264     MET-HN 0.2719
1265     MET-O -0.5679
1266     MET-HA 0.0880
1267     MET-CB 0.0342
1268     MET-HB 0.0241
1269     MET-CG 0.0018
1270     MET-HG 0.0440
1271     MET-SD -0.2737
1272     MET-CE -0.0536
1273     MET-HE 0.0684
1274     LYS-N -0.3479
1275     LYS-CA -0.2400
1276     LYS-C 0.7341
1277     LYS-HN 0.2747
1278     LYS-O -0.5894
1279     LYS-HA 0.1426
1280     LYS-CB -0.0094
1281     LYS-HB 0.0362
1282     LYS-CG 0.0187
1283     LYS-HG 0.0103
1284     LYS-CD -0.0479
1285     LYS-HD 0.0621
1286     LYS-CE -0.0143
1287     LYS-HE 0.1135
1288     LYS-NZ -0.3854
1289     LYS-HZ 0.3400
1290     ARG-N -0.3479
1291     ARG-CA -0.2637
1292     ARG-C 0.7341
1293     ARG-HN 0.2747
1294     ARG-O -0.5894
1295     ARG-HA 0.1560
1296     ARG-CB -0.0007
1297     ARG-HB 0.0327
1298     ARG-CG 0.0390
1299     ARG-HG 0.0285
1300     ARG-CD 0.0486
1301     ARG-HD 0.0687
1302     ARG-NE -0.5295
1303     ARG-HE 0.3456
1304     ARG-CZ 0.8076
1305     ARG-NH -0.8627
1306     ARG-HH 0.4478
1307     ORN-N -0.3479
1308     ORN-CA -0.2400
1309     ORN-C 0.7341
1310     ORN-HN 0.2747
1311     ORN-O -0.5894
1312     ORN-HA 0.1426
1313     ORN-CB 0.0099
1314     ORN-HB 0.0362
1315     ORN-CG -0.0279
1316     ORN-HG 0.0621
1317     ORN-CD -0.0143
1318     ORN-HD 0.1135
1319     ORN-NE -0.3854
1320     ORN-HE 0.3400
1321     MAA-N -0.4157
1322     MAA-CA 0.1032
1323     MAA-C 0.5973
1324     MAA-HN 0.2719
1325     MAA-O -0.5679
1326     MAA-CB -0.2503
1327     MAA-HB 0.0853
1328     PCA-N -0.4157
1329     PCA-CA -0.0371
1330     PCA-C 0.5973
1331     PCA-HN 0.2719
1332     PCA-O -0.5679
1333     PCA-HA 0.0850
1334     PCA-CB -0.0036
1335     PCA-HB 0.0171
1336     PCA-CG -0.0645
1337     PCA-HG 0.0352
1338     PCA-CD 0.6000
1339     PCA-OE -0.5700
1340     FOR-C 0.5500
1341     FOR-H 0.0000
1342     FOR-O -0.5500
1343     ACE-CA -0.3662
1344     ACE-HA 0.1123
1345     ACE-C 0.5972
1346     ACE-O -0.5679
1347 gezelter 1278 C-Term-N -0.8400
1348     C-Term-H 0.4200
1349     N-MeAmide-N -0.4157
1350     N-MeAmide-H 0.2719
1351     N-MeAmide-C -0.1490
1352     N-MeAmide-H1 0.0976
1353 gezelter 1270 NGLY-N 0.2943
1354     NGLY-CA -0.0100
1355     NGLY-C 0.6163
1356     NGLY-HN 0.1642
1357     NGLY-O -0.5722
1358     NGLY-HA 0.0895
1359     NALA-N 0.1414
1360     NALA-CA 0.1281
1361     NALA-C 0.6163
1362     NALA-HN 0.1997
1363     NALA-O -0.5722
1364     NALA-HA 0.0889
1365     NVAL-N 0.0577
1366     NVAL-CA 0.0023
1367     NVAL-C 0.6163
1368     NVAL-HN 0.2272
1369     NVAL-O -0.5722
1370     NVAL-HA 0.1093
1371     NLEU-N 0.1010
1372     NLEU-CA 0.0343
1373     NLEU-C 0.6123
1374     NLEU-HN 0.2148
1375     NLEU-O -0.5713
1376     NLEU-HA 0.1053
1377     NILE-N 0.0311
1378     NILE-CA 0.0389
1379     NILE-C 0.6123
1380     NILE-HN 0.2329
1381     NILE-O -0.5713
1382     NILE-HA 0.1031
1383     NSER-N 0.1849
1384     NSER-CA 0.0684
1385     NSER-C 0.6163
1386     NSER-HN 0.1898
1387     NSER-O -0.5722
1388     NSER-HA 0.0782
1389     NTHR-N 0.1812
1390     NTHR-CA 0.0332
1391     NTHR-C 0.6163
1392     NTHR-HN 0.1934
1393     NTHR-O -0.5722
1394     NTHR-HA 0.1087
1395     NCYS-N 0.1325
1396     NCYS-CA 0.0978
1397     NCYS-C 0.6123
1398     NCYS-HN 0.2023
1399     NCYS-O -0.5713
1400     NCYS-HA 0.1411
1401     NCYX-N 0.2096
1402     NCYX-CA 0.1138
1403     NCYX-C 0.6163
1404     NCYX-HN 0.1815
1405     NCYX-O -0.5713
1406     NCYX-HA 0.0922
1407     NPRO-N -0.2020
1408     NPRO-CA 0.1589
1409     NPRO-C 0.5260
1410     NPRO-HN 0.3120
1411     NPRO-O -0.5000
1412     NPRO-HA 0.1000
1413     NPRO-CD -0.0120
1414     NPRO-HD 0.1000
1415     NPHE-N 0.1737
1416     NPHE-CA 0.0859
1417     NPHE-C 0.6123
1418     NPHE-HN 0.1921
1419     NPHE-O -0.5713
1420     NPHE-HA 0.1041
1421     NTYR-N 0.1940
1422     NTYR-CA 0.0766
1423     NTYR-C 0.6123
1424     NTYR-HN 0.1873
1425     NTYR-O -0.5713
1426     NTYR-HA 0.0983
1427     NTRP-N 0.1913
1428     NTRP-CA 0.0555
1429     NTRP-C 0.6123
1430     NTRP-HN 0.1888
1431     NTRP-O -0.5713
1432     NTRP-HA 0.1162
1433     NHIS-N 0.2560
1434     NHIS-CA 0.0653
1435     NHIS-C 0.7214
1436     NHIS-HN 0.1704
1437     NHIS-O -0.6013
1438     NHIS-HA 0.1047
1439     NHID-N 0.1542
1440     NHID-CA 0.1126
1441     NHID-C 0.6123
1442     NHID-HN 0.1963
1443     NHID-O -0.5713
1444     NHID-HA 0.0958
1445     NHIE-N 0.1472
1446     NHIE-CA 0.0325
1447     NHIE-C 0.6123
1448     NHIE-HN 0.2016
1449     NHIE-O -0.5713
1450     NHIE-HA 0.1380
1451     NASP-N 0.0782
1452     NASP-CA 0.0326
1453     NASP-C 0.5621
1454     NASP-HN 0.2200
1455     NASP-O -0.5889
1456     NASP-HA 0.1141
1457     NASN-N 0.1801
1458     NASN-CA 0.0811
1459     NASN-C 0.6163
1460     NASN-HN 0.1921
1461     NASN-O -0.5722
1462     NASN-HA 0.1231
1463     NGLU-N 0.0017
1464     NGLU-CA 0.0698
1465     NGLU-C 0.5621
1466     NGLU-HN 0.2391
1467     NGLU-O -0.5889
1468     NGLU-HA 0.1202
1469 cli2 1289 NGLN-N 0.1493
1470     NGLN-CA 0.0769
1471     NGLN-C 0.6123
1472     NGLN-HN 0.1996
1473     NGLN-O -0.5713
1474     NGLN-HA 0.1015
1475 gezelter 1270 NMET-N 0.1592
1476     NMET-CA 0.0429
1477     NMET-C 0.6123
1478     NMET-HN 0.1984
1479     NMET-O -0.5713
1480     NMET-HA 0.1116
1481     NLYS-N 0.0966
1482     NLYS-CA -0.0101
1483     NLYS-C 0.7214
1484     NLYS-HN 0.2165
1485     NLYS-O -0.6013
1486     NLYS-HA 0.1180
1487     NARG-N 0.1305
1488     NARG-CA -0.0359
1489     NARG-C 0.7214
1490     NARG-HN 0.2083
1491     NARG-O -0.6013
1492     NARG-HA 0.1242
1493     NORN-N 0.0966
1494     NORN-CA -0.0101
1495     NORN-C 0.7214
1496     NORN-HN 0.2165
1497     NORN-O -0.6013
1498     NORN-HA 0.1180
1499     NAIB-N 0.1000
1500     NAIB-CA 0.2447
1501     NAIB-C 0.6163
1502     NAIB-HN 0.2000
1503     NAIB-O -0.5722
1504     CGLY-N -0.3821
1505     CGLY-CA -0.2493
1506     CGLY-C 0.7231
1507     CGLY-HN 0.2681
1508     CGLY-OXT -0.7855
1509     CGLY-HA 0.1056
1510     CALA-N -0.3821
1511     CALA-CA -0.1532
1512     CALA-C 0.7731
1513     CALA-HN 0.2681
1514     CALA-OXT -0.8055
1515     CALA-HA 0.1067
1516     CVAL-N -0.3821
1517     CVAL-CA -0.3352
1518     CVAL-C 0.8350
1519     CVAL-HN 0.2681
1520     CVAL-OXT -0.8173
1521     CVAL-HA 0.1438
1522     CLEU-N -0.3821
1523     CLEU-CA -0.2874
1524     CLEU-C 0.8326
1525     CLEU-HN 0.2681
1526     CLEU-OXT -0.8199
1527     CLEU-HA 0.1346
1528     CILE-N -0.3821
1529     CILE-CA -0.3070
1530     CILE-C 0.8343
1531     CILE-HN 0.2681
1532     CILE-OXT -0.8190
1533     CILE-HA 0.1375
1534     CSER-N -0.3821
1535     CSER-CA -0.2563
1536     CSER-C 0.8113
1537     CSER-HN 0.2681
1538     CSER-OXT -0.8132
1539     CSER-HA 0.1304
1540     CTHR-N -0.3821
1541     CTHR-CA -0.2315
1542     CTHR-C 0.7810
1543     CTHR-HN 0.2681
1544     CTHR-OXT -0.8044
1545     CTHR-HA 0.1207
1546     CCYS-N -0.3821
1547     CCYS-CA -0.1598
1548     CCYS-C 0.7497
1549     CCYS-HN 0.2681
1550     CCYS-OXT -0.7981
1551     CCYS-HA 0.1396
1552     CCYX-N -0.3821
1553     CCYX-CA -0.1283
1554     CCYX-C 0.7618
1555     CCYX-HN 0.2681
1556     CCYX-OXT -0.8041
1557     CCYX-HA 0.0938
1558     CPRO-N -0.2802
1559     CPRO-CA -0.1236
1560     CPRO-C 0.6631
1561     CPRO-OXT -0.7697
1562     CPRO-HA 0.0776
1563     CPHE-N -0.3821
1564     CPHE-CA -0.1756
1565     CPHE-C 0.7660
1566     CPHE-HN 0.2681
1567     CPHE-OXT -0.8026
1568     CPHE-HA 0.1098
1569     CTYR-N -0.3821
1570     CTYR-CA -0.1911
1571     CTYR-C 0.7817
1572     CTYR-HN 0.2681
1573     CTYR-OXT -0.8070
1574     CTYR-HA 0.1092
1575     CTRP-N -0.3821
1576     CTRP-CA -0.2064
1577     CTRP-C 0.7658
1578     CTRP-HN 0.2681
1579     CTRP-OXT -0.8011
1580     CTRP-HA 0.1272
1581     CHIS-N -0.3481
1582     CHIS-CA -0.1503
1583     CHIS-C 0.8032
1584     CHIS-HN 0.2764
1585     CHIS-OXT -0.8177
1586     CHIS-HA 0.1115
1587     CHID-N -0.3821
1588     CHID-CA -0.1618
1589     CHID-C 0.7615
1590     CHID-HN 0.2681
1591     CHID-OXT -0.8016
1592     CHID-HA 0.1100
1593     CHIE-N -0.3821
1594     CHIE-CA -0.2661
1595     CHIE-C 0.7916
1596     CHIE-HN 0.2681
1597     CHIE-OXT -0.8065
1598     CHIE-HA 0.1650
1599     CASP-N -0.5192
1600     CASP-CA -0.1810
1601     CASP-C 0.7256
1602     CASP-HN 0.3055
1603     CASP-OXT -0.7887
1604     CASP-HA 0.1046
1605     CASN-N -0.3821
1606     CASN-CA -0.1927
1607     CASN-C 0.8050
1608     CASN-HN 0.2681
1609     CASN-OXT -0.8147
1610     CASN-HA 0.1358
1611     CGLU-N -0.5192
1612     CGLU-CA -0.2000
1613     CGLU-C 0.7420
1614     CGLU-HN 0.3055
1615     CGLU-OXT -0.7930
1616     CGLU-HA 0.1399
1617     CGLN-N -0.3821
1618     CGLN-CA -0.2108
1619     CGLN-C 0.7775
1620     CGLN-HN 0.2681
1621     CGLN-OXT -0.8042
1622     CGLN-HA 0.1232
1623     CMET-N -0.3821
1624     CMET-CA -0.2441
1625     CMET-C 0.8013
1626     CMET-HN 0.2681
1627     CMET-OXT -0.8105
1628     CMET-HA 0.1277
1629     CLYS-N -0.3481
1630     CLYS-CA -0.2964
1631     CLYS-C 0.8488
1632     CLYS-HN 0.2764
1633     CLYS-OXT -0.8252
1634     CLYS-HA 0.1438
1635     CARG-N -0.3481
1636     CARG-CA -0.3117
1637     CARG-C 0.8557
1638     CARG-HN 0.2764
1639     CARG-OXT -0.8266
1640     CARG-HA 0.1447
1641     CORN-N -0.3481
1642     CORN-CA -0.2964
1643     CORN-C 0.8488
1644     CORN-HN 0.2764
1645     CORN-OXT -0.8252
1646     CORN-HA 0.1438
1647     CAIB-N -0.3821
1648     CAIB-CA -0.0572
1649     CAIB-C 0.8000
1650     CAIB-HN 0.2681
1651     CAIB-OXT -0.8200
1652     RA-O5' -0.4989
1653     RA-C5' 0.0558
1654     RA-H5'1 0.0679
1655     RA-H5'2 0.0679
1656     RA-C4' 0.1065
1657     RA-H4' 0.1174
1658     RA-O4' -0.3548
1659     RA-C1' 0.0394
1660     RA-H1' 0.2007
1661     RA-C3' 0.2022
1662     RA-H3' 0.0615
1663     RA-C2' 0.0670
1664     RA-H2'1 0.0972
1665     RA-O2' -0.6139
1666     RA-HO'2 0.4186
1667     RA-O3' -0.5246
1668     RA-N9 -0.0251
1669     RA-C4 0.3053
1670     RA-C5 0.0515
1671     RA-N7 -0.6073
1672     RA-C8 0.2006
1673     RA-N3 -0.6997
1674     RA-C2 0.5875
1675     RA-N1 -0.7615
1676     RA-C6 0.7009
1677     RA-H2 0.0473
1678     RA-N6 -0.9019
1679     RA-H61 0.4115
1680     RA-H62 0.4115
1681     RA-H8 0.1553
1682     RG-O5' -0.4989
1683     RG-C5' 0.0558
1684     RG-H5'1 0.0679
1685     RG-H5'2 0.0679
1686     RG-C4' 0.1065
1687     RG-H4' 0.1174
1688     RG-O4' -0.3548
1689     RG-C1' 0.0191
1690     RG-H1' 0.2006
1691     RG-C3' 0.2022
1692     RG-H3' 0.0615
1693     RG-C2' 0.0670
1694     RG-H2'1 0.0972
1695     RG-O2' -0.6139
1696     RG-HO'2 0.4186
1697     RG-O3' -0.5246
1698     RG-N9 0.0492
1699     RG-C4 0.1222
1700     RG-C5 0.1744
1701     RG-N7 -0.5709
1702     RG-C8 0.1374
1703     RG-N3 -0.6323
1704     RG-C2 0.7657
1705     RG-N1 -0.4787
1706     RG-C6 0.4770
1707     RG-H1 0.3424
1708     RG-N2 -0.9672
1709     RG-H21 0.4364
1710     RG-H22 0.4364
1711     RG-O6 -0.5597
1712     RG-H8 0.1640
1713     RC-O5' -0.4989
1714     RC-C5' 0.0558
1715     RC-H5'1 0.0679
1716     RC-H5'2 0.0679
1717     RC-C4' 0.1065
1718     RC-H4' 0.1174
1719     RC-O4' -0.3548
1720     RC-C1' 0.0066
1721     RC-H1' 0.2029
1722     RC-C3' 0.2022
1723     RC-H3' 0.0615
1724     RC-C2' 0.0670
1725     RC-H2'1 0.0972
1726     RC-O2' -0.6139
1727     RC-HO'2 0.4186
1728     RC-O3' -0.5246
1729     RC-N1 -0.0484
1730     RC-C2 0.7538
1731     RC-N3 -0.7584
1732     RC-C4 0.8185
1733     RC-C5 -0.5215
1734     RC-C6 0.0053
1735     RC-O2 -0.6252
1736     RC-N4 -0.9530
1737     RC-H41 0.4234
1738     RC-H42 0.4234
1739     RC-H5 0.1928
1740     RC-H6 0.1958
1741     RU-O5' -0.4989
1742     RU-C5' 0.0558
1743     RU-H5'1 0.0679
1744     RU-H5'2 0.0679
1745     RU-C4' 0.1065
1746     RU-H4' 0.1174
1747     RU-O4' -0.3548
1748     RU-C1' 0.0674
1749     RU-H1' 0.1824
1750     RU-C3' 0.2022
1751     RU-H3' 0.0615
1752     RU-C2' 0.0670
1753     RU-H2'1 0.0972
1754     RU-O2' -0.6139
1755     RU-HO'2 0.4186
1756     RU-O3' -0.5246
1757     RU-N1 0.0418
1758     RU-C2 0.4687
1759     RU-N3 -0.3549
1760     RU-C4 0.5952
1761     RU-C5 -0.3635
1762     RU-C6 -0.1126
1763     RU-O2 -0.5477
1764     RU-H3 0.3154
1765     RU-O4 -0.5761
1766     RU-H5 0.1811
1767     RU-H6 0.2188
1768     DA-O5' -0.4954
1769     DA-C5' -0.0069
1770     DA-H5'1 0.0754
1771     DA-H5'2 0.0754
1772     DA-C4' 0.1629
1773     DA-H4' 0.1176
1774     DA-O4' -0.3691
1775     DA-C1' 0.0431
1776     DA-H1' 0.1838
1777     DA-C3' 0.0713
1778     DA-H3' 0.0985
1779     DA-C2' -0.0854
1780     DA-H2'1 0.0718
1781     DA-H2'2 0.0718
1782     DA-O3' -0.5232
1783     DA-N9 -0.0268
1784     DA-C4 0.3800
1785     DA-C5 0.0725
1786     DA-N7 -0.6175
1787     DA-C8 0.1607
1788     DA-N3 -0.7417
1789     DA-C2 0.5716
1790     DA-N1 -0.7624
1791     DA-C6 0.6897
1792     DA-H2 0.0598
1793     DA-N6 -0.9123
1794     DA-H61 0.4167
1795     DA-H62 0.4167
1796     DA-H8 0.1877
1797     DG-O5' -0.4954
1798     DG-C5' -0.0069
1799     DG-H5'1 0.0754
1800     DG-H5'2 0.0754
1801     DG-C4' 0.1629
1802     DG-H4' 0.1176
1803     DG-O4' -0.3691
1804     DG-C1' 0.0358
1805     DG-H1' 0.1746
1806     DG-C3' 0.0713
1807     DG-H3' 0.0985
1808     DG-C2' -0.0854
1809     DG-H2'1 0.0718
1810     DG-H2'2 0.0718
1811     DG-O3' -0.5232
1812     DG-N9 0.0577
1813     DG-C4 0.1814
1814     DG-C5 0.1991
1815     DG-N7 -0.5725
1816     DG-C8 0.0736
1817     DG-N3 -0.6636
1818     DG-C2 0.7432
1819     DG-N1 -0.5053
1820     DG-C6 0.4918
1821     DG-H1 0.3520
1822     DG-N2 -0.9230
1823     DG-H21 0.4235
1824     DG-H22 0.4235
1825     DG-O6 -0.5699
1826     DG-H8 0.1997
1827     DC-O5' -0.4954
1828     DC-C5' -0.0069
1829     DC-H5'1 0.0754
1830     DC-H5'2 0.0754
1831     DC-C4' 0.1629
1832     DC-H4' 0.1176
1833     DC-O4' -0.3691
1834     DC-C1' -0.0116
1835     DC-H1' 0.1963
1836     DC-C3' 0.0713
1837     DC-H3' 0.0985
1838     DC-C2' -0.0854
1839     DC-H2'1 0.0718
1840     DC-H2'2 0.0718
1841     DC-O3' -0.5232
1842     DC-N1 -0.0339
1843     DC-C2 0.7959
1844     DC-N3 -0.7748
1845     DC-C4 0.8439
1846     DC-C5 -0.5222
1847     DC-C6 -0.0183
1848     DC-O2 -0.6548
1849     DC-N4 -0.9773
1850     DC-H41 0.4314
1851     DC-H42 0.4314
1852     DC-H5 0.1863
1853     DC-H6 0.2293
1854     DT-O5' -0.4954
1855     DT-C5' -0.0069
1856     DT-H5'1 0.0754
1857     DT-H5'2 0.0754
1858     DT-C4' 0.1629
1859     DT-H4' 0.1176
1860     DT-O4' -0.3691
1861     DT-C1' 0.0680
1862     DT-H1' 0.1804
1863     DT-C3' 0.0713
1864     DT-H3' 0.0985
1865     DT-C2' -0.0854
1866     DT-H2'1 0.0718
1867     DT-H2'2 0.0718
1868     DT-O3' -0.5232
1869     DT-N1 -0.0239
1870     DT-C2 0.5677
1871     DT-N3 -0.4340
1872     DT-C4 0.5194
1873     DT-C5 0.0025
1874     DT-C6 -0.2209
1875     DT-O2 -0.5881
1876     DT-H3 0.3420
1877     DT-O4 -0.5563
1878     DT-C7 -0.2269
1879     DT-H7 0.0770
1880     DT-H6 0.2607
1881 gezelter 1278 R-Phosphodiester-P 1.1662
1882     R-Phosphodiester-O -0.7760
1883 gezelter 1270 R5H-O5' -0.6223
1884     R5H-H5T 0.4295
1885     R5P-O5' -0.6328
1886     R5P-P 0.9000
1887     R5P-OP -0.8200
1888     R3H-O3' -0.6541
1889     R3H-H3T 0.4376
1890     R3P-O3' -0.6565
1891     R3P-P 0.9000
1892     R3P-OP -0.8200
1893 gezelter 1278 D-Phosphodiester-P 1.1659
1894     D-Phosphodiester-O -0.7761
1895 gezelter 1270 D5H-O5' -0.6318
1896     D5H-H5T 0.4422
1897     D5P-O5' -0.6296
1898     D5P-P 0.9000
1899     D5P-OP -0.8200
1900     D3H-O3' -0.6549
1901     D3H-H3T 0.4396
1902     D3P-O3' -0.6553
1903     D3P-P 0.9000
1904     D3P-OP -0.8200
1905 gezelter 1278 TIP3P-O -0.834
1906 gezelter 1782 TIP3P-H 0.417
1907     O_TIP3P -0.834
1908     O_SPCE -0.8476
1909     O_SPC -0.82
1910     O_POL3 -0.7300
1911     H_TIP3P 0.417
1912     H_TIP4P 0.520
1913     H_TIP4P-Ew 0.52422
1914     H_TIP5P 0.241
1915     H_SPCE 0.4238
1916     H_SPC 0.42
1917     H_POL3 0.3650
1918     EP_TIP4P -1.040
1919     EP_TIP4P-Ew -1.04844
1920     EP_TIP5P -0.241
1921 gezelter 1270 Li+ 1.000
1922     Na+ 1.000
1923     K+ 1.000
1924     Rb+ 1.000
1925     Cs+ 1.000
1926     Mg+2 2.000
1927     Ca+2 2.000
1928     Zn+2 2.000
1929     Cl- -1.000
1930 kstocke1 1526 F- -1.000
1931     Br- -1.000
1932     I- -1.000
1933 gezelter 1270 end ChargeAtomTypes
1934    
1935    
1936    
1937     begin LennardJonesAtomTypes
1938     //name epsilon sigma
1939     CT 0.109400 3.399670
1940     C 0.086000 3.399670
1941     CA 0.086000 3.399670
1942     CM 0.086000 3.399670
1943     CC 0.086000 3.399670
1944     CV 0.086000 3.399670
1945     CW 0.086000 3.399670
1946     CR 0.086000 3.399670
1947     CB 0.086000 3.399670
1948     C* 0.086000 3.399670
1949     CN 0.086000 3.399670
1950     CK 0.086000 3.399670
1951     CQ 0.086000 3.399670
1952     N 0.170000 3.249999
1953     NA 0.170000 3.249999
1954     NB 0.170000 3.249999
1955     NC 0.170000 3.249999
1956     N* 0.170000 3.249999
1957     N2 0.170000 3.249999
1958     N3 0.170000 3.340870
1959     OW 0.152000 3.150752
1960 gezelter 1363 O_TIP3P 0.1521 3.15061
1961     O_TIP4P 0.1550 3.15365
1962     O_TIP4P-Ew 0.16275 3.16435
1963     O_TIP5P 0.16 3.12
1964     O_TIP5P-E 0.178 3.097
1965     O_SPCE 0.15532 3.16549
1966     O_SPC 0.15532 3.16549
1967 gezelter 1782 O_POL3 0.156 1.7980
1968 gezelter 1270 OH 0.210400 3.066473
1969     OS 0.170000 3.000012
1970     O 0.210000 2.959922
1971     O2 0.210000 2.959922
1972     S 0.250000 3.563595
1973     SH 0.250000 3.563595
1974     P 0.200000 3.741775
1975     H 0.015700 1.069078
1976     HW 0.000000 0.000178
1977     HO 0.000000 0.000178
1978     HS 0.015700 1.069078
1979     HA 0.015000 2.599642
1980     HC 0.015700 2.649533
1981     H1 0.015700 2.471353
1982     H2 0.015700 2.293173
1983     H3 0.015700 2.114994
1984     HP 0.015700 1.959977
1985     H4 0.015000 2.510553
1986     H5 0.015000 2.421463
1987     Li+ 0.018300 2.025904
1988     Na+ 0.002770 3.328398
1989     K+ 0.000328 4.736018
1990     Rb+ 0.000170 5.266993
1991     Cs+ 0.000081 6.049202
1992 gezelter 1278 Mg+2 0.894700 1.412253
1993     Ca+2 0.459789 3.052397
1994     Zn+2 0.012500 1.959977
1995 gezelter 1270 Cl- 0.100000 4.401040
1996     end LennardJonesAtomTypes
1997    
1998    
1999     begin BondTypes
2000     //Atom1 Atom2 Harmonic b0 kb (kcal/mol)
2001     CT CT Harmonic 1.526000 310.000000
2002     CT C Harmonic 1.522000 317.000000
2003     CT CA Harmonic 1.510000 317.000000
2004     CT CM Harmonic 1.510000 317.000000
2005     CT CC Harmonic 1.504000 317.000000
2006     CT C* Harmonic 1.495000 317.000000
2007     CT N Harmonic 1.449000 337.000000
2008     CT N* Harmonic 1.475000 337.000000
2009     CT N2 Harmonic 1.463000 337.000000
2010     CT N3 Harmonic 1.471000 367.000000
2011     CT OH Harmonic 1.410000 320.000000
2012     CT OS Harmonic 1.410000 320.000000
2013     CT S Harmonic 1.810000 227.000000
2014     CT SH Harmonic 1.810000 237.000000
2015     CT HC Harmonic 1.090000 340.000000
2016     CT H1 Harmonic 1.090000 340.000000
2017     CT H2 Harmonic 1.090000 340.000000
2018     CT H3 Harmonic 1.090000 340.000000
2019     CT HP Harmonic 1.090000 340.000000
2020     C CA Harmonic 1.409000 469.000000
2021     C CM Harmonic 1.444000 410.000000
2022     C CB Harmonic 1.419000 447.000000
2023     C N Harmonic 1.335000 490.000000
2024     C NA Harmonic 1.388000 418.000000
2025     C NC Harmonic 1.358000 457.000000
2026     C N* Harmonic 1.383000 424.000000
2027     C O Harmonic 1.229000 570.000000
2028     C O2 Harmonic 1.250000 656.000000
2029     CA CA Harmonic 1.400000 469.000000
2030     CA CM Harmonic 1.433000 427.000000
2031     CA CB Harmonic 1.404000 469.000000
2032     CA CN Harmonic 1.400000 469.000000
2033     CA NA Harmonic 1.381000 427.000000
2034     CA NC Harmonic 1.339000 483.000000
2035     CA N2 Harmonic 1.340000 481.000000
2036     CA OH Harmonic 1.364000 450.000000
2037     CA HA Harmonic 1.080000 367.000000
2038     CA H4 Harmonic 1.080000 367.000000
2039     CM CM Harmonic 1.350000 549.000000
2040     CM N* Harmonic 1.365000 448.000000
2041     CM HA Harmonic 1.080000 367.000000
2042     CM H4 Harmonic 1.080000 367.000000
2043     CM H5 Harmonic 1.080000 367.000000
2044     CC CV Harmonic 1.375000 512.000000
2045     CC CW Harmonic 1.371000 518.000000
2046     CC NA Harmonic 1.385000 422.000000
2047     CC NB Harmonic 1.394000 410.000000
2048     CV NB Harmonic 1.394000 410.000000
2049     CV H4 Harmonic 1.080000 367.000000
2050     CW C* Harmonic 1.352000 546.000000
2051     CW NA Harmonic 1.381000 427.000000
2052     CW H4 Harmonic 1.080000 367.000000
2053     CR NA Harmonic 1.343000 477.000000
2054     CR NB Harmonic 1.335000 488.000000
2055     CR H5 Harmonic 1.080000 367.000000
2056     CB CB Harmonic 1.370000 520.000000
2057     CB C* Harmonic 1.459000 388.000000
2058     CB CN Harmonic 1.419000 447.000000
2059     CB NB Harmonic 1.391000 414.000000
2060     CB NC Harmonic 1.354000 461.000000
2061     CB N* Harmonic 1.374000 436.000000
2062     C* HC Harmonic 1.080000 367.000000
2063     CN NA Harmonic 1.380000 428.000000
2064     CK NB Harmonic 1.304000 529.000000
2065     CK N* Harmonic 1.371000 440.000000
2066     CK H5 Harmonic 1.080000 367.000000
2067     CQ NC Harmonic 1.324000 502.000000
2068     CQ H5 Harmonic 1.080000 367.000000
2069     N H Harmonic 1.010000 434.000000
2070     NA H Harmonic 1.010000 434.000000
2071     N* H Harmonic 1.010000 434.000000
2072     N2 H Harmonic 1.010000 434.000000
2073     N3 H Harmonic 1.010000 434.000000
2074     OW HW Harmonic 0.957200 553.000000
2075     OH P Harmonic 1.610000 230.000000
2076     OH HO Harmonic 0.960000 553.000000
2077     OS P Harmonic 1.610000 230.000000
2078     OS HO Harmonic 0.960000 553.000000
2079     O2 P Harmonic 1.480000 525.000000
2080     S S Harmonic 2.038000 166.000000
2081     SH HS Harmonic 1.336000 274.000000
2082     HW HW Harmonic 1.513600 553.000000
2083 gezelter 1278 end BondTypes
2084 gezelter 1270
2085    
2086     begin BendTypes
2087     //Atom1 Atom2 Atom3 Harmonic Theta Ktheta
2088     CT CT CT Harmonic 109.500000 80.000000
2089     CT CT C Harmonic 111.100000 126.000000
2090     CT CT CA Harmonic 114.000000 126.000000
2091     CT CT CC Harmonic 113.100000 126.000000
2092     CT CT C* Harmonic 115.600000 126.000000
2093     CT CT N Harmonic 109.700000 160.000000
2094     CT CT N* Harmonic 109.500000 100.000000
2095     CT CT N2 Harmonic 111.200000 160.000000
2096     CT CT N3 Harmonic 111.200000 160.000000
2097     CT CT OH Harmonic 109.500000 100.000000
2098     CT CT OS Harmonic 109.500000 100.000000
2099     CT CT S Harmonic 114.700000 100.000000
2100     CT CT SH Harmonic 108.600000 100.000000
2101     CT CT HC Harmonic 109.500000 100.000000
2102     CT CT H1 Harmonic 109.500000 100.000000
2103     CT CT H2 Harmonic 109.500000 100.000000
2104     CT CT HP Harmonic 109.500000 100.000000
2105     C CT N Harmonic 110.100000 126.000000
2106     C CT N3 Harmonic 111.200000 160.000000
2107     C CT HC Harmonic 109.500000 100.000000
2108     C CT H1 Harmonic 109.500000 100.000000
2109     C CT HP Harmonic 109.500000 100.000000
2110     CA CT HC Harmonic 109.500000 100.000000
2111     CM CT HC Harmonic 109.500000 100.000000
2112     CC CT HC Harmonic 109.500000 100.000000
2113     C* CT HC Harmonic 109.500000 100.000000
2114     N CT H1 Harmonic 109.500000 100.000000
2115     N* CT OS Harmonic 109.500000 100.000000
2116     N* CT H1 Harmonic 109.500000 100.000000
2117     N* CT H2 Harmonic 109.500000 100.000000
2118     N2 CT H1 Harmonic 109.500000 100.000000
2119     N3 CT H1 Harmonic 109.500000 100.000000
2120     N3 CT HP Harmonic 109.500000 100.000000
2121     OH CT H1 Harmonic 109.500000 100.000000
2122     OS CT H1 Harmonic 109.500000 100.000000
2123     OS CT H2 Harmonic 109.500000 100.000000
2124     S CT H1 Harmonic 109.500000 100.000000
2125     SH CT H1 Harmonic 109.500000 100.000000
2126     HC CT HC Harmonic 109.500000 70.000000
2127     H1 CT H1 Harmonic 109.500000 70.000000
2128     H2 CT H2 Harmonic 109.500000 70.000000
2129     HP CT HP Harmonic 109.500000 70.000000
2130     CT C N Harmonic 116.600000 140.000000
2131     CT C O Harmonic 120.400000 160.000000
2132     CT C O2 Harmonic 117.000000 140.000000
2133     CA C CA Harmonic 120.000000 126.000000
2134     CM C NA Harmonic 114.100000 140.000000
2135     CM C O Harmonic 125.300000 160.000000
2136     CB C NA Harmonic 111.300000 140.000000
2137     CB C O Harmonic 128.800000 160.000000
2138     N C O Harmonic 122.900000 160.000000
2139     NA C N* Harmonic 115.400000 140.000000
2140     NA C O Harmonic 120.600000 160.000000
2141     NC C N* Harmonic 118.600000 140.000000
2142     NC C O Harmonic 122.500000 160.000000
2143     N* C O Harmonic 120.900000 160.000000
2144     O C O Harmonic 126.000000 160.000000
2145     O2 C O2 Harmonic 126.000000 160.000000
2146     CT CA CA Harmonic 120.000000 140.000000
2147     C CA CA Harmonic 120.000000 126.000000
2148     C CA HA Harmonic 120.000000 100.000000
2149     CA CA CA Harmonic 120.000000 126.000000
2150     CA CA CB Harmonic 120.000000 126.000000
2151     CA CA CN Harmonic 120.000000 126.000000
2152     CA CA OH Harmonic 120.000000 140.000000
2153     CA CA HA Harmonic 120.000000 100.000000
2154     CA CA H4 Harmonic 120.000000 100.000000
2155     CM CA NC Harmonic 121.500000 140.000000
2156     CM CA N2 Harmonic 120.100000 140.000000
2157     CB CA NC Harmonic 117.300000 140.000000
2158     CB CA N2 Harmonic 123.500000 140.000000
2159     CB CA HA Harmonic 120.000000 100.000000
2160     CB CA H4 Harmonic 120.000000 100.000000
2161     CN CA HA Harmonic 120.000000 100.000000
2162     NA CA NC Harmonic 123.300000 140.000000
2163     NA CA N2 Harmonic 116.000000 140.000000
2164     NC CA N2 Harmonic 119.300000 140.000000
2165     N2 CA N2 Harmonic 120.000000 140.000000
2166     CT CM C Harmonic 119.700000 140.000000
2167     CT CM CM Harmonic 119.700000 140.000000
2168     C CM CM Harmonic 120.700000 126.000000
2169     C CM HA Harmonic 119.700000 100.000000
2170     C CM H4 Harmonic 119.700000 100.000000
2171     CA CM CM Harmonic 117.000000 126.000000
2172     CA CM HA Harmonic 123.300000 100.000000
2173     CA CM H4 Harmonic 123.300000 100.000000
2174     CM CM N* Harmonic 121.200000 140.000000
2175     CM CM HA Harmonic 119.700000 100.000000
2176     CM CM H4 Harmonic 119.700000 100.000000
2177     N* CM H4 Harmonic 119.100000 100.000000
2178     CT CC CV Harmonic 120.000000 140.000000
2179     CT CC CW Harmonic 120.000000 140.000000
2180     CT CC NA Harmonic 120.000000 140.000000
2181     CT CC NB Harmonic 120.000000 140.000000
2182     CV CC NA Harmonic 120.000000 140.000000
2183     CW CC NA Harmonic 120.000000 140.000000
2184     CW CC NB Harmonic 120.000000 140.000000
2185     CC CV NB Harmonic 120.000000 140.000000
2186     CC CV H4 Harmonic 120.000000 100.000000
2187     NB CV H4 Harmonic 120.000000 100.000000
2188     CC CW NA Harmonic 120.000000 140.000000
2189     CC CW H4 Harmonic 120.000000 100.000000
2190     C* CW NA Harmonic 108.700000 140.000000
2191     C* CW H4 Harmonic 120.000000 100.000000
2192     NA CW H4 Harmonic 120.000000 100.000000
2193     NA CR NA Harmonic 120.000000 140.000000
2194     NA CR NB Harmonic 120.000000 140.000000
2195     NA CR H5 Harmonic 120.000000 100.000000
2196     NB CR H5 Harmonic 120.000000 100.000000
2197     C CB CB Harmonic 119.200000 126.000000
2198     C CB NB Harmonic 130.000000 140.000000
2199     CA CB CB Harmonic 117.300000 126.000000
2200     CA CB C* Harmonic 134.900000 126.000000
2201     CA CB CN Harmonic 116.200000 126.000000
2202     CA CB NB Harmonic 132.400000 140.000000
2203     CB CB NB Harmonic 110.400000 140.000000
2204     CB CB NC Harmonic 127.700000 140.000000
2205     CB CB N* Harmonic 106.200000 140.000000
2206     C* CB CN Harmonic 108.800000 126.000000
2207     NC CB N* Harmonic 126.200000 140.000000
2208     CT C* CW Harmonic 125.000000 140.000000
2209     CT C* CB Harmonic 128.600000 140.000000
2210     CW C* CB Harmonic 106.400000 126.000000
2211     CA CN CB Harmonic 122.700000 126.000000
2212     CA CN NA Harmonic 132.800000 140.000000
2213     CB CN NA Harmonic 104.400000 140.000000
2214     NB CK N* Harmonic 113.900000 140.000000
2215     NB CK H5 Harmonic 123.050000 100.000000
2216     N* CK H5 Harmonic 123.050000 100.000000
2217     NC CQ NC Harmonic 129.100000 140.000000
2218     NC CQ H5 Harmonic 115.450000 100.000000
2219     CT N CT Harmonic 118.000000 100.000000
2220     CT N C Harmonic 121.900000 100.000000
2221     CT N H Harmonic 118.040000 100.000000
2222     C N H Harmonic 120.000000 100.000000
2223     H N H Harmonic 120.000000 70.000000
2224     C NA C Harmonic 126.400000 140.000000
2225     C NA CA Harmonic 125.200000 140.000000
2226     C NA H Harmonic 116.800000 100.000000
2227     CA NA H Harmonic 118.000000 100.000000
2228     CC NA CR Harmonic 120.000000 140.000000
2229     CC NA H Harmonic 120.000000 100.000000
2230     CW NA CR Harmonic 120.000000 140.000000
2231     CW NA CN Harmonic 111.600000 140.000000
2232     CW NA H Harmonic 120.000000 100.000000
2233     CR NA H Harmonic 120.000000 100.000000
2234     CN NA H Harmonic 123.100000 100.000000
2235     CC NB CR Harmonic 117.000000 140.000000
2236     CV NB CR Harmonic 117.000000 140.000000
2237     CB NB CK Harmonic 103.800000 140.000000
2238     C NC CA Harmonic 120.500000 140.000000
2239     CA NC CB Harmonic 112.200000 140.000000
2240     CA NC CQ Harmonic 118.600000 140.000000
2241     CB NC CQ Harmonic 111.000000 140.000000
2242     CT N* C Harmonic 117.600000 140.000000
2243     CT N* CM Harmonic 121.200000 140.000000
2244     CT N* CB Harmonic 125.800000 140.000000
2245     CT N* CK Harmonic 128.800000 140.000000
2246     C N* CM Harmonic 121.600000 140.000000
2247     C N* H Harmonic 119.200000 100.000000
2248     CM N* H Harmonic 121.200000 100.000000
2249     CB N* CK Harmonic 105.400000 140.000000
2250     CB N* H Harmonic 125.800000 100.000000
2251     CK N* H Harmonic 128.800000 100.000000
2252     CT N2 CA Harmonic 123.200000 100.000000
2253     CT N2 H Harmonic 118.400000 100.000000
2254     CA N2 H Harmonic 120.000000 100.000000
2255     H N2 H Harmonic 120.000000 70.000000
2256     CT N3 CT Harmonic 109.500000 100.000000
2257     CT N3 H Harmonic 109.500000 100.000000
2258     H N3 H Harmonic 109.500000 70.000000
2259     HW OW HW Harmonic 104.520000 200.000000
2260     CT OH HO Harmonic 108.500000 110.000000
2261     CA OH HO Harmonic 113.000000 100.000000
2262     P OH HO Harmonic 108.500000 90.000000
2263     CT OS CT Harmonic 109.500000 120.000000
2264     CT OS P Harmonic 120.500000 200.000000
2265     P OS P Harmonic 120.500000 200.000000
2266     CT S CT Harmonic 98.900000 124.000000
2267     CT S S Harmonic 103.700000 136.000000
2268     CT SH HS Harmonic 96.000000 86.000000
2269     HS SH HS Harmonic 92.070000 70.000000
2270     OH P OS Harmonic 102.600000 90.000000
2271     OH P O2 Harmonic 108.230000 90.000000
2272     OS P OS Harmonic 102.600000 90.000000
2273     OS P O2 Harmonic 108.230000 200.000000
2274     O2 P O2 Harmonic 119.900000 280.000000
2275     OW HW HW Harmonic 127.740000 0.000000
2276 gezelter 1414 C OH HO Harmonic 113.00 50.00000
2277 gezelter 1270 end BendTypes
2278    
2279    
2280     begin TorsionTypes
2281     //Atom1 Atom2 Atom3 Atom4 Charmm Kchi n delta [Kchi n delta]
2282     CT CT CT CT Charmm 0.200000 1 180.000000 0.25 2 180 0.18 3 0
2283     CT CT CT C Charmm 0.156000 3 0.000000
2284     CT CT CT N Charmm 0.156000 3 0.000000
2285     CT CT CT N* Charmm 0.156000 3 0.000000
2286     CT CT CT N2 Charmm 0.156000 3 0.000000
2287     CT CT CT N3 Charmm 0.156000 3 0.000000
2288     CT CT CT OH Charmm 0.156000 3 0.000000
2289     CT CT CT OS Charmm 0.156000 3 0.000000
2290     CT CT CT S Charmm 0.156000 3 0.000000
2291     CT CT CT HC Charmm 0.160000 3 0.000000
2292     CT CT CT H1 Charmm 0.156000 3 0.000000
2293     CT CT CT H2 Charmm 0.156000 3 0.000000
2294     CT CT CT HP Charmm 0.156000 3 0.000000
2295     C CT CT C Charmm 0.156000 3 0.000000
2296     C CT CT CA Charmm 0.156000 3 0.000000
2297     C CT CT CC Charmm 0.156000 3 0.000000
2298     C CT CT C* Charmm 0.156000 3 0.000000
2299     C CT CT N Charmm 0.156000 3 0.000000
2300     C CT CT N3 Charmm 0.156000 3 0.000000
2301     C CT CT OH Charmm 0.156000 3 0.000000
2302     C CT CT S Charmm 0.156000 3 0.000000
2303     C CT CT SH Charmm 0.156000 3 0.000000
2304     C CT CT HC Charmm 0.156000 3 0.000000
2305     C CT CT H1 Charmm 0.156000 3 0.000000
2306     C CT CT HP Charmm 0.156000 3 0.000000
2307     CA CT CT N Charmm 0.156000 3 0.000000
2308     CA CT CT N3 Charmm 0.156000 3 0.000000
2309     CA CT CT H1 Charmm 0.156000 3 0.000000
2310     CA CT CT HP Charmm 0.156000 3 0.000000
2311     CC CT CT N Charmm 0.156000 3 0.000000
2312     CC CT CT N3 Charmm 0.156000 3 0.000000
2313     CC CT CT H1 Charmm 0.156000 3 0.000000
2314     CC CT CT HP Charmm 0.156000 3 0.000000
2315     C* CT CT N Charmm 0.156000 3 0.000000
2316     C* CT CT N3 Charmm 0.156000 3 0.000000
2317     C* CT CT H1 Charmm 0.156000 3 0.000000
2318     C* CT CT HP Charmm 0.156000 3 0.000000
2319     N CT CT OH Charmm 0.156000 3 0.000000
2320     N CT CT S Charmm 0.156000 3 0.000000
2321     N CT CT SH Charmm 0.156000 3 0.000000
2322     N CT CT HC Charmm 0.156000 3 0.000000
2323     N CT CT H1 Charmm 0.156000 3 0.000000
2324     N* CT CT OH Charmm 0.156000 3 0.000000
2325     N* CT CT HC Charmm 0.156000 3 0.000000
2326     N* CT CT H1 Charmm 0.156000 3 0.000000
2327     N2 CT CT HC Charmm 0.156000 3 0.000000
2328     N3 CT CT OH Charmm 0.156000 3 0.000000
2329     N3 CT CT S Charmm 0.156000 3 0.000000
2330     N3 CT CT SH Charmm 0.156000 3 0.000000
2331     N3 CT CT HC Charmm 0.156000 3 0.000000
2332     N3 CT CT H1 Charmm 0.156000 3 0.000000
2333     OH CT CT N* Charmm 0.156000 3 0.000000
2334     OH CT CT OH Charmm 0.144000 3 0.000000 1.175 2 0
2335     OH CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2336     OH CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2337     OH CT CT H1 Charmm 0.156000 3 0.000000
2338     OH CT CT H2 Charmm 0.156000 3 0.000000
2339     OH CT CT HP Charmm 0.156000 3 0.000000
2340     OS CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2341     OS CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2342     OS CT CT H1 Charmm 0.156000 3 0.000000
2343     S CT CT HC Charmm 0.156000 3 0.000000
2344     S CT CT H1 Charmm 0.156000 3 0.000000
2345     S CT CT HP Charmm 0.156000 3 0.000000
2346     SH CT CT H1 Charmm 0.156000 3 0.000000
2347     SH CT CT HP Charmm 0.156000 3 0.000000
2348     HC CT CT HC Charmm 0.150000 3 0.000000
2349     HC CT CT H1 Charmm 0.156000 3 0.000000
2350     HC CT CT H2 Charmm 0.156000 3 0.000000
2351     HC CT CT HP Charmm 0.156000 3 0.000000
2352     H1 CT CT H1 Charmm 0.156000 3 0.000000
2353     H1 CT CT H2 Charmm 0.156000 3 0.000000
2354     H1 CT CT HP Charmm 0.156000 3 0.000000
2355     CT CT C N Charmm 0.070000 2 0.000000 0.1 4 0
2356     CT CT C O Charmm 0.000000 2 0.000000
2357     CT CT C O2 Charmm 0.000000 2 0.000000
2358     N CT C N Charmm 1.700000 1 180.000000 2.0 2 180
2359     N CT C O Charmm 0.000000 2 0.000000
2360     N CT C O2 Charmm 0.000000 2 0.000000
2361     N3 CT C N Charmm 0.000000 2 0.000000
2362     N3 CT C O Charmm 0.000000 2 0.000000
2363     N3 CT C O2 Charmm 0.000000 2 0.000000
2364     HC CT C N Charmm 0.000000 2 0.000000
2365     HC CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2366     HC CT C O2 Charmm 0.000000 2 0.000000
2367     H1 CT C N Charmm 0.000000 2 0.000000
2368     H1 CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2369     H1 CT C O2 Charmm 0.000000 2 0.000000
2370     CT CT CA CA Charmm 0.000000 2 0.000000
2371     HC CT CA CA Charmm 0.000000 2 0.000000
2372     HC CT CM C Charmm 0.000000 3 0.000000
2373     HC CT CM CM Charmm 1.150000 1 0.000000 0.38 3 180
2374     CT CT CC CV Charmm 0.000000 2 0.000000
2375     CT CT CC CW Charmm 0.000000 2 0.000000
2376     CT CT CC NA Charmm 0.000000 2 0.000000
2377     CT CT CC NB Charmm 0.000000 2 0.000000
2378     HC CT CC CV Charmm 0.000000 2 0.000000
2379     HC CT CC CW Charmm 0.000000 2 0.000000
2380     HC CT CC NA Charmm 0.000000 2 0.000000
2381     HC CT CC NB Charmm 0.000000 2 0.000000
2382     CT CT C* CW Charmm 0.000000 2 0.000000
2383     CT CT C* CB Charmm 0.000000 2 0.000000
2384     HC CT C* CW Charmm 0.000000 2 0.000000
2385     HC CT C* CB Charmm 0.000000 2 0.000000
2386     CT CT N CT Charmm 0.000000 2 0.000000
2387     CT CT N C Charmm 0.530000 1 0.000000 0.15 3 180 0.5 4 180
2388     CT CT N H Charmm 0.000000 2 0.000000
2389     C CT N CT Charmm 0.000000 2 0.000000
2390     C CT N C Charmm 0.800000 1 0.000000 0.85 2 180
2391     C CT N H Charmm 0.000000 2 0.000000
2392     H1 CT N CT Charmm 0.000000 2 0.000000
2393     H1 CT N C Charmm 0.000000 2 0.000000
2394     H1 CT N H Charmm 0.000000 2 0.000000
2395     CT CT N* C Charmm 0.000000 2 0.000000
2396     CT CT N* CM Charmm 0.000000 2 0.000000
2397     CT CT N* CB Charmm 0.000000 2 0.000000
2398     CT CT N* CK Charmm 0.000000 2 0.000000
2399     OS CT N* C Charmm 0.000000 2 0.000000
2400     OS CT N* CM Charmm 0.000000 2 180.000000 2.5 1 0
2401     OS CT N* CB Charmm 0.000000 2 0.000000
2402     OS CT N* CK Charmm 0.000000 2 180.000000 2.5 1 0
2403     H2 CT N* C Charmm 0.000000 2 0.000000
2404     H2 CT N* CM Charmm 0.000000 2 0.000000
2405     H2 CT N* CB Charmm 0.000000 2 0.000000
2406     H2 CT N* CK Charmm 0.000000 2 0.000000
2407     CT CT N2 CA Charmm 0.000000 3 0.000000
2408     CT CT N2 H Charmm 0.000000 3 0.000000
2409     H1 CT N2 CA Charmm 0.000000 3 0.000000
2410     H1 CT N2 H Charmm 0.000000 3 0.000000
2411     CT CT N3 CT Charmm 0.156000 3 0.000000
2412     CT CT N3 H Charmm 0.156000 3 0.000000
2413     C CT N3 CT Charmm 0.156000 3 0.000000
2414     C CT N3 H Charmm 0.156000 3 0.000000
2415     H1 CT N3 CT Charmm 0.156000 3 0.000000
2416     H1 CT N3 H Charmm 0.156000 3 0.000000
2417     HP CT N3 CT Charmm 0.156000 3 0.000000
2418     HP CT N3 H Charmm 0.156000 3 0.000000
2419     CT CT OH HO Charmm 0.025000 1 0.000000 0.16 3 0
2420     H1 CT OH HO Charmm 0.167000 3 0.000000
2421     CT CT OS CT Charmm 0.383000 3 0.000000 0.1 2 180
2422     CT CT OS C Charmm 0.383000 3 0.000000 0.8 1 180
2423     CT CT OS P Charmm 0.383000 3 0.000000
2424     N* CT OS CT Charmm 0.383000 3 0.000000 0.65 2 0
2425     OS CT OS CT Charmm 1.350000 1 180.000000 0.85 3 180 0.1 3 0
2426     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2427     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2428     H1 CT OS CT Charmm 0.383000 3 0.000000
2429     H1 CT OS P Charmm 0.383000 3 0.000000
2430     H2 CT OS CT Charmm 0.383000 3 0.000000
2431     CT CT S CT Charmm 0.333000 3 0.000000
2432     CT CT S S Charmm 0.333000 3 0.000000
2433     H1 CT S CT Charmm 0.333000 3 0.000000
2434     H1 CT S S Charmm 0.333000 3 0.000000
2435     CT CT SH HS Charmm 0.250000 3 0.000000
2436     H1 CT SH HS Charmm 0.250000 3 0.000000
2437     NA C CM CT Charmm 2.175000 2 180.000000
2438     NA C CM CM Charmm 2.175000 2 180.000000
2439     NA C CM HA Charmm 2.175000 2 180.000000
2440     O C CM CT Charmm 2.175000 2 180.000000
2441     O C CM CM Charmm 2.175000 2 180.000000 0.3 3 0
2442     O C CM HA Charmm 2.175000 2 180.000000
2443     NA C CB CB Charmm 3.000000 2 180.000000
2444     NA C CB NB Charmm 3.000000 2 180.000000
2445     O C CB CB Charmm 3.000000 2 180.000000
2446     O C CB NB Charmm 3.000000 2 180.000000
2447     CT C N CT Charmm 2.500000 2 180.000000
2448     CT C N H Charmm 2.500000 2 180.000000
2449     O C N CT Charmm 2.500000 2 180.000000
2450     O C N H Charmm 2.000000 1 0.000000 2.5 2 180
2451     CM C NA C Charmm 1.350000 2 180.000000
2452     CM C NA H Charmm 1.350000 2 180.000000
2453     CB C NA CA Charmm 1.350000 2 180.000000
2454     CB C NA H Charmm 1.350000 2 180.000000
2455     N* C NA C Charmm 1.350000 2 180.000000
2456     N* C NA H Charmm 1.350000 2 180.000000
2457     O C NA C Charmm 1.350000 2 180.000000
2458     O C NA CA Charmm 1.350000 2 180.000000
2459     O C NA H Charmm 1.350000 2 180.000000
2460     N* C NC CA Charmm 4.000000 2 180.000000
2461     O C NC CA Charmm 4.000000 2 180.000000
2462     NA C N* CT Charmm 1.450000 2 180.000000
2463     NA C N* CM Charmm 1.450000 2 180.000000
2464     NC C N* CT Charmm 1.450000 2 180.000000
2465     NC C N* CM Charmm 1.450000 2 180.000000
2466     O C N* CT Charmm 1.450000 2 180.000000
2467     O C N* CM Charmm 1.450000 2 180.000000
2468     O C OH HO Charmm 1.900000 1 0.000000 2.3 2 180
2469     O C OS CT Charmm 1.400000 1 180.000000 2.7 2 180
2470     CT CA CA CA Charmm 3.625000 2 180.000000
2471     CT CA CA HA Charmm 3.625000 2 180.000000
2472     CA CA CA CA Charmm 3.625000 2 180.000000
2473     CA CA CA CB Charmm 3.625000 2 180.000000
2474     CA CA CA CN Charmm 3.625000 2 180.000000
2475     CA CA CA OH Charmm 3.625000 2 180.000000
2476     CA CA CA HA Charmm 3.625000 2 180.000000
2477     CB CA CA HA Charmm 3.625000 2 180.000000
2478     CN CA CA HA Charmm 3.625000 2 180.000000
2479     OH CA CA HA Charmm 3.625000 2 180.000000
2480     HA CA CA HA Charmm 3.625000 2 180.000000
2481     NC CA CM CM Charmm 2.550000 2 180.000000
2482     NC CA CM HA Charmm 2.550000 2 180.000000
2483     N2 CA CM CM Charmm 2.550000 2 180.000000
2484     N2 CA CM HA Charmm 2.550000 2 180.000000
2485     CA CA CB C* Charmm 3.500000 2 180.000000
2486     CA CA CB CN Charmm 3.500000 2 180.000000
2487     NC CA CB CB Charmm 3.500000 2 180.000000
2488     NC CA CB NB Charmm 3.500000 2 180.000000
2489     N2 CA CB CB Charmm 3.500000 2 180.000000
2490     N2 CA CB NB Charmm 3.500000 2 180.000000
2491     HA CA CB C* Charmm 3.500000 2 180.000000
2492     HA CA CB CN Charmm 3.500000 2 180.000000
2493     CA CA CN CB Charmm 3.625000 2 180.000000
2494     CA CA CN NA Charmm 3.625000 2 180.000000
2495     HA CA CN CB Charmm 3.625000 2 180.000000
2496     HA CA CN NA Charmm 3.625000 2 180.000000
2497     NC CA NA C Charmm 1.500000 2 180.000000
2498     NC CA NA H Charmm 1.500000 2 180.000000
2499     N2 CA NA C Charmm 1.500000 2 180.000000
2500     N2 CA NA H Charmm 1.500000 2 180.000000
2501     CM CA NC C Charmm 4.800000 2 180.000000
2502     CB CA NC CQ Charmm 4.800000 2 180.000000
2503     NA CA NC CB Charmm 4.800000 2 180.000000
2504     N2 CA NC C Charmm 4.800000 2 180.000000
2505     N2 CA NC CB Charmm 4.800000 2 180.000000
2506     N2 CA NC CQ Charmm 4.800000 2 180.000000
2507     CM CA N2 H Charmm 2.400000 2 180.000000
2508     CB CA N2 H Charmm 2.400000 2 180.000000
2509     NA CA N2 H Charmm 2.400000 2 180.000000
2510     NC CA N2 H Charmm 2.400000 2 180.000000
2511     N2 CA N2 CT Charmm 2.400000 2 180.000000
2512     N2 CA N2 H Charmm 2.400000 2 180.000000
2513     CA CA OH HO Charmm 0.900000 2 180.000000
2514     CT CM CM CT Charmm 1.900000 1 180.000000 6.65 2 180
2515     CT CM CM N* Charmm 6.650000 2 180.000000
2516     CT CM CM H4 Charmm 6.650000 2 180.000000
2517     C CM CM N* Charmm 6.650000 2 180.000000
2518     C CM CM H4 Charmm 6.650000 2 180.000000
2519     CA CM CM N* Charmm 6.650000 2 180.000000
2520     CA CM CM H4 Charmm 6.650000 2 180.000000
2521     HA CM CM N* Charmm 6.650000 2 180.000000
2522     HA CM CM H4 Charmm 6.650000 2 180.000000
2523     CM CM N* CT Charmm 1.850000 2 180.000000
2524     CM CM N* C Charmm 1.850000 2 180.000000
2525     H4 CM N* CT Charmm 1.850000 2 180.000000
2526     H4 CM N* C Charmm 1.850000 2 180.000000
2527     CT CC CV NB Charmm 5.150000 2 180.000000
2528     CT CC CV H4 Charmm 5.150000 2 180.000000
2529     NA CC CV NB Charmm 5.150000 2 180.000000
2530     NA CC CV H4 Charmm 5.150000 2 180.000000
2531     CT CC CW NA Charmm 5.375000 2 180.000000
2532     CT CC CW H4 Charmm 5.375000 2 180.000000
2533     NA CC CW NA Charmm 5.375000 2 180.000000
2534     NA CC CW H4 Charmm 5.375000 2 180.000000
2535     NB CC CW NA Charmm 5.375000 2 180.000000
2536     NB CC CW H4 Charmm 5.375000 2 180.000000
2537     CT CC NA CR Charmm 1.400000 2 180.000000
2538     CT CC NA H Charmm 1.400000 2 180.000000
2539     CV CC NA CR Charmm 1.400000 2 180.000000
2540     CV CC NA H Charmm 1.400000 2 180.000000
2541     CW CC NA CR Charmm 1.400000 2 180.000000
2542     CW CC NA H Charmm 1.400000 2 180.000000
2543     CT CC NB CR Charmm 2.400000 2 180.000000
2544     CW CC NB CR Charmm 2.400000 2 180.000000
2545     CC CV NB CR Charmm 2.400000 2 180.000000
2546     H4 CV NB CR Charmm 2.400000 2 180.000000
2547     NA CW C* CT Charmm 6.525000 2 180.000000
2548     NA CW C* CB Charmm 6.525000 2 180.000000
2549     H4 CW C* CT Charmm 6.525000 2 180.000000
2550     H4 CW C* CB Charmm 6.525000 2 180.000000
2551     CC CW NA CR Charmm 1.500000 2 180.000000
2552     CC CW NA H Charmm 1.500000 2 180.000000
2553     C* CW NA CN Charmm 1.500000 2 180.000000
2554     C* CW NA H Charmm 1.500000 2 180.000000
2555     H4 CW NA CR Charmm 1.500000 2 180.000000
2556     H4 CW NA CN Charmm 1.500000 2 180.000000
2557     H4 CW NA H Charmm 1.500000 2 180.000000
2558     NA CR NA CC Charmm 2.325000 2 180.000000
2559     NA CR NA CW Charmm 2.325000 2 180.000000
2560     NA CR NA H Charmm 2.325000 2 180.000000
2561     NB CR NA CC Charmm 2.325000 2 180.000000
2562     NB CR NA CW Charmm 2.325000 2 180.000000
2563     NB CR NA H Charmm 2.325000 2 180.000000
2564     H5 CR NA CC Charmm 2.325000 2 180.000000
2565     H5 CR NA CW Charmm 2.325000 2 180.000000
2566     H5 CR NA H Charmm 2.325000 2 180.000000
2567     NA CR NB CC Charmm 5.000000 2 180.000000
2568     NA CR NB CV Charmm 5.000000 2 180.000000
2569     H5 CR NB CC Charmm 5.000000 2 180.000000
2570     H5 CR NB CV Charmm 5.000000 2 180.000000
2571     C CB CB NC Charmm 5.450000 2 180.000000
2572     C CB CB N* Charmm 5.450000 2 180.000000
2573     CA CB CB NC Charmm 5.450000 2 180.000000
2574     CA CB CB N* Charmm 5.450000 2 180.000000
2575     NB CB CB NC Charmm 5.450000 2 180.000000
2576     NB CB CB N* Charmm 5.450000 2 180.000000
2577     CA CB C* CT Charmm 1.675000 2 180.000000
2578     CA CB C* CW Charmm 1.675000 2 180.000000
2579     CN CB C* CT Charmm 1.675000 2 180.000000
2580     CN CB C* CW Charmm 1.675000 2 180.000000
2581     CA CB CN CA Charmm 3.000000 2 180.000000
2582     CA CB CN NA Charmm 3.000000 2 180.000000
2583     C* CB CN CA Charmm 3.000000 2 180.000000
2584     C* CB CN NA Charmm 3.000000 2 180.000000
2585     C CB NB CK Charmm 2.550000 2 180.000000
2586     CA CB NB CK Charmm 2.550000 2 180.000000
2587     CB CB NB CK Charmm 2.550000 2 180.000000
2588     CB CB NC CA Charmm 4.150000 2 180.000000
2589     CB CB NC CQ Charmm 4.150000 2 180.000000
2590     N* CB NC CA Charmm 4.150000 2 180.000000
2591     N* CB NC CQ Charmm 4.150000 2 180.000000
2592     CB CB N* CT Charmm 1.650000 2 180.000000
2593     CB CB N* CK Charmm 1.650000 2 180.000000
2594     NC CB N* CT Charmm 1.650000 2 180.000000
2595     NC CB N* CK Charmm 1.650000 2 180.000000
2596     CA CN NA CW Charmm 1.525000 2 180.000000
2597     CA CN NA H Charmm 1.525000 2 180.000000
2598     CB CN NA CW Charmm 1.525000 2 180.000000
2599     CB CN NA H Charmm 1.525000 2 180.000000
2600     N* CK NB CB Charmm 10.000000 2 180.000000
2601     H5 CK NB CB Charmm 10.000000 2 180.000000
2602     NB CK N* CT Charmm 1.700000 2 180.000000
2603     NB CK N* CB Charmm 1.700000 2 180.000000
2604     H5 CK N* CT Charmm 1.700000 2 180.000000
2605     H5 CK N* CB Charmm 1.700000 2 180.000000
2606     NC CQ NC CA Charmm 6.800000 2 180.000000
2607     NC CQ NC CB Charmm 6.800000 2 180.000000
2608     H5 CQ NC CA Charmm 6.800000 2 180.000000
2609     H5 CQ NC CB Charmm 6.800000 2 180.000000
2610     HO OH P OS Charmm 0.250000 3 0.000000
2611     HO OH P O2 Charmm 0.250000 3 0.000000
2612     CT OS P OH Charmm 0.250000 3 0.000000 1.2 2 0
2613     CT OS P OS Charmm 0.250000 3 0.000000 1.2 2 0
2614     CT OS P O2 Charmm 0.250000 3 0.000000
2615     CT S S CT Charmm 3.500000 2 0.000000 0.6 3 0
2616 gezelter 1414 CT C OH HO Charmm 2.30000000 2 180.0
2617 gezelter 1270 end TorsionTypes
2618    
2619    
2620 gezelter 1278 begin InversionTypes
2621 cli2 1289 C CT N O AmberImproper 10.500000
2622     C CM NA O AmberImproper 10.500000
2623     C CB NA O AmberImproper 10.500000
2624     C N* NA O AmberImproper 10.500000
2625     C CT O2 O2 AmberImproper 10.500000
2626     CA CA CA CT AmberImproper 1.100000
2627     CA CA CA OH AmberImproper 1.100000
2628     CA CA CA HA AmberImproper 1.100000
2629     CA CN CA HA AmberImproper 1.100000
2630     CA NC CM N2 AmberImproper 1.100000
2631     CA CA CB HA AmberImproper 1.100000
2632     CA CB NC N2 AmberImproper 1.100000
2633     CA NA NC N2 AmberImproper 1.100000
2634     CA N2 N2 N2 AmberImproper 10.500000
2635     CM CM CA HA AmberImproper 1.100000
2636     CM C CM CT AmberImproper 1.100000
2637     CM C CM HA AmberImproper 1.100000
2638     CM N* CM H4 AmberImproper 1.100000
2639     CC NA CV CT AmberImproper 1.100000
2640     CC NA CW CT AmberImproper 1.100000
2641     CC NB CW CT AmberImproper 1.100000
2642     CV CC NB H4 AmberImproper 1.100000
2643     CW CC NA H4 AmberImproper 1.100000
2644     CW C* NA H4 AmberImproper 1.100000
2645     CR NA NA H5 AmberImproper 1.100000
2646     CR NB NA H5 AmberImproper 1.100000
2647     CR NA NB H5 AmberImproper 1.100000
2648     C* CW CB CT AmberImproper 1.100000
2649     CK NB N* H5 AmberImproper 1.100000
2650     CQ NC NC H5 AmberImproper 1.100000
2651     N C CT CT AmberImproper 1.000000
2652     N C CT H AmberImproper 1.000000
2653     N C H H AmberImproper 1.000000
2654     NA C C H AmberImproper 1.000000
2655     NA C CA H AmberImproper 1.000000
2656     NA CR CW H AmberImproper 1.000000
2657     NA CC CR H AmberImproper 1.000000
2658     NA CW CN H AmberImproper 1.000000
2659     N* CM C CT AmberImproper 1.000000
2660     N* CK CB CT AmberImproper 1.000000
2661     N2 CT CA H AmberImproper 1.000000
2662     N2 CA H H AmberImproper 1.000000
2663 gezelter 1414 C CT OH O2 AmberImproper 10.5
2664 gezelter 1278 end InversionTypes
2665 gezelter 1270