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root/OpenMD/trunk/forceFields/Amber.frc
Revision: 1563
Committed: Wed May 18 19:27:54 2011 UTC (14 years, 2 months ago) by gezelter
File size: 101118 byte(s)
Log Message:
Matched default Charges for OH and HO (Hydroxyl) to the values from
OPLS paper.

File Contents

# User Rev Content
1 gezelter 1278 begin Options
2 cli2 1289 Name "Amber"
3     vdW-14-scale 0.5
4     electrostatic-14-scale 0.83333333333333333
5 gezelter 1278 end Options
6 gezelter 1270
7     begin BaseAtomTypes
8     //number name mass (amu)
9 cli2 1289 C 12.01
10     N 14.01
11     O 16.0
12     S 32.06
13     P 30.97
14     H 1.008
15 gezelter 1270 Li+ 6.940
16     Na+ 22.990
17     K+ 39.100
18     Rb+ 85.470
19     Cs+ 132.910
20 gezelter 1278 Mg+2 24.305
21     Ca+2 40.080
22     Zn+2 65.400
23 gezelter 1270 Cl- 35.450
24 kstocke1 1526 F- 19.000
25     Br- 79.900
26     I- 126.900
27 gezelter 1363 EP 0.0
28 gezelter 1270 end BaseAtomTypes
29    
30    
31     begin AtomTypes
32     //name baseatomtype
33 cli2 1289 CT C
34     CA C
35     CM C
36     CC C
37     CV C
38     CW C
39     CR C
40     CB C
41     C* C
42     CN C
43     CK C
44     CQ C
45     NA N
46     NB N
47     NC N
48     N* N
49     N2 N
50     N3 N
51     OW O
52     OH O
53     OS O
54     O2 O
55     SH S
56     HW H
57     HO H
58     HS H
59     HA H
60     HC H
61     H1 H
62     H2 H
63     H3 H
64     HP H
65     H4 H
66     H5 H
67 gezelter 1270 GLY-N N
68     GLY-CA CT
69     GLY-C C
70     GLY-HN H
71     GLY-O O
72     GLY-HA H1
73     ALA-N N
74     ALA-CA CT
75     ALA-C C
76     ALA-HN H
77     ALA-O O
78     ALA-HA H1
79     ALA-CB CT
80     ALA-HB HC
81     VAL-N N
82     VAL-CA CT
83     VAL-C C
84     VAL-HN H
85     VAL-O O
86     VAL-HA H1
87     VAL-CB CT
88     VAL-HB HC
89 cli2 1289 VAL-CG CT
90     VAL-HG HC
91 gezelter 1270 LEU-N N
92     LEU-CA CT
93     LEU-C C
94     LEU-HN H
95     LEU-O O
96     LEU-HA H1
97     LEU-CB CT
98     LEU-HB HC
99     LEU-CG CT
100     LEU-HG HC
101 cli2 1289 LEU-CD CT
102     LEU-HD HC
103 gezelter 1270 ILE-N N
104     ILE-CA CT
105     ILE-C C
106     ILE-HN H
107     ILE-O O
108     ILE-HA H1
109     ILE-CB CT
110     ILE-HB HC
111     ILE-CG1 CT
112     ILE-HG1 HC
113     ILE-CG2 CT
114     ILE-HG2 HC
115     ILE-CD CT
116     ILE-HD HC
117     SER-N N
118     SER-CA CT
119     SER-C C
120     SER-HN H
121     SER-O O
122     SER-HA H1
123     SER-CB CT
124     SER-HB H1
125     SER-OG OH
126     SER-HG HO
127     THR-N N
128     THR-CA CT
129     THR-C C
130     THR-HN H
131     THR-O O
132     THR-HA H1
133     THR-CB CT
134     THR-HB H1
135     THR-OG1 OH
136     THR-HG1 HO
137     THR-CG2 CT
138     THR-HG2 HC
139     CYS-N N
140     CYS-CA CT
141     CYS-C C
142     CYS-HN H
143     CYS-O O
144     CYS-HA H1
145     CYS-CB CT
146     CYS-HB H1
147     CYS-SG SH
148     CYS-HG HS
149     CYX-N N
150     CYX-CA CT
151     CYX-C C
152     CYX-HN H
153     CYX-O O
154     CYX-HA H1
155     CYX-CB CT
156     CYX-HB H1
157     CYX-SG S
158     PRO-N N
159     PRO-CA CT
160     PRO-C C
161     PRO-O O
162     PRO-HA H1
163     PRO-CB CT
164     PRO-HB HC
165     PRO-CG CT
166     PRO-HG HC
167     PRO-CD CT
168     PRO-HD H1
169     PHE-N N
170     PHE-CA CT
171     PHE-C C
172     PHE-HN H
173     PHE-O O
174     PHE-HA H1
175     PHE-CB CT
176     PHE-HB HC
177     PHE-CG CA
178     PHE-CD CA
179     PHE-HD HA
180     PHE-CE CA
181     PHE-HE HA
182     PHE-CZ CA
183     PHE-HZ HA
184     TYR-N N
185     TYR-CA CT
186     TYR-C C
187     TYR-HN H
188     TYR-O O
189     TYR-HA H1
190     TYR-CB CT
191     TYR-HB HC
192     TYR-CG CA
193     TYR-CD CA
194     TYR-HD HA
195     TYR-CE CA
196     TYR-HE HA
197     TYR-CZ CA
198     TYR-OH OH
199 cli2 1289 TYR-HO HO
200 gezelter 1270 TRP-N N
201     TRP-CA CT
202     TRP-C C
203     TRP-HN H
204     TRP-O O
205     TRP-HA H1
206     TRP-CB CT
207     TRP-HB HC
208     TRP-CG C*
209     TRP-CD1 CW
210     TRP-HD1 H4
211     TRP-CD2 CB
212     TRP-NE1 NA
213     TRP-HE1 H
214     TRP-CE2 CN
215     TRP-CE3 CA
216     TRP-HE3 HA
217     TRP-CZ2 CA
218     TRP-HZ2 HA
219     TRP-CZ3 CA
220     TRP-HZ3 HA
221     TRP-CH2 CA
222     TRP-HH2 HA
223     HIS-N N
224     HIS-CA CT
225     HIS-C C
226     HIS-HN H
227     HIS-O O
228     HIS-HA H1
229     HIS-CB CT
230     HIS-HB HC
231     HIS-CG CC
232     HIS-ND1 NA
233     HIS-HD1 H
234     HIS-CD2 CW
235     HIS-HD2 H4
236     HIS-CE1 CR
237     HIS-HE1 H5
238     HIS-NE2 NA
239     HIS-HE2 H
240     HID-N N
241     HID-CA CT
242     HID-C C
243     HID-HN H
244     HID-O O
245     HID-HA H1
246     HID-CB CT
247     HID-HB HC
248     HID-CG CC
249     HID-ND1 NA
250     HID-HD1 H
251     HID-CD2 CV
252     HID-HD2 H4
253     HID-CE1 CR
254     HID-HE1 H5
255     HID-NE2 NB
256     HIE-N N
257     HIE-CA CT
258     HIE-C C
259     HIE-HN H
260     HIE-O O
261     HIE-HA H1
262     HIE-CB CT
263     HIE-HB HC
264     HIE-CG CC
265     HIE-ND1 NB
266     HIE-CD2 CW
267     HIE-HD2 H4
268     HIE-CE1 CR
269     HIE-HE1 H5
270     HIE-NE2 NA
271     HIE-HE2 H
272     ASP-N N
273     ASP-CA CT
274     ASP-C C
275     ASP-HN H
276     ASP-O O
277     ASP-HA H1
278     ASP-CB CT
279     ASP-HB HC
280     ASP-CG C
281     ASP-OD O2
282     ASN-N N
283     ASN-CA CT
284     ASN-C C
285     ASN-HN H
286     ASN-O O
287     ASN-HA H1
288     ASN-CB CT
289     ASN-HB HC
290     ASN-CG C
291     ASN-OD1 O
292     ASN-ND2 N
293     ASN-HD2 H
294     GLU-N N
295     GLU-CA CT
296     GLU-C C
297     GLU-HN H
298     GLU-O O
299     GLU-HA H1
300     GLU-CB CT
301     GLU-HB HC
302     GLU-CG CT
303     GLU-HG HC
304     GLU-CD C
305     GLU-OE O2
306     GLN-N N
307     GLN-CA CT
308     GLN-C C
309     GLN-HN H
310     GLN-O O
311     GLN-HA H1
312     GLN-CB CT
313     GLN-HB HC
314     GLN-CG CT
315     GLN-HG HC
316     GLN-CD C
317     GLN-OE1 O
318     GLN-NE2 N
319     GLN-HE2 H
320     MET-N N
321     MET-CA CT
322     MET-C C
323     MET-HN H
324     MET-O O
325     MET-HA H1
326     MET-CB CT
327     MET-HB HC
328     MET-CG CT
329     MET-HG H1
330     MET-SD S
331     MET-CE CT
332     MET-HE H1
333     LYS-N N
334     LYS-CA CT
335     LYS-C C
336     LYS-HN H
337     LYS-O O
338     LYS-HA H1
339     LYS-CB CT
340     LYS-HB HC
341     LYS-CG CT
342     LYS-HG HC
343     LYS-CD CT
344     LYS-HD HC
345     LYS-CE CT
346     LYS-HE HP
347     LYS-NZ N3
348     LYS-HZ H
349     ARG-N N
350     ARG-CA CT
351     ARG-C C
352     ARG-HN H
353     ARG-O O
354     ARG-HA H1
355     ARG-CB CT
356     ARG-HB HC
357     ARG-CG CT
358     ARG-HG HC
359     ARG-CD CT
360     ARG-HD H1
361     ARG-NE N2
362     ARG-HE H
363     ARG-CZ CA
364     ARG-NH N2
365     ARG-HH H
366     ORN-N N
367     ORN-CA CT
368     ORN-C C
369     ORN-HN H
370     ORN-O O
371     ORN-HA H1
372     ORN-CB CT
373     ORN-HB HC
374     ORN-CG CT
375     ORN-HG HC
376     ORN-CD CT
377     ORN-HD HP
378     ORN-NE N3
379     ORN-HE H
380     MAA-N N
381     MAA-CA CT
382     MAA-C C
383     MAA-HN H
384     MAA-O O
385     MAA-CB CT
386     MAA-HB HC
387     PCA-N N
388     PCA-CA CT
389     PCA-C C
390     PCA-HN H
391     PCA-O O
392     PCA-HA H1
393     PCA-CB CT
394     PCA-HB HC
395     PCA-CG CT
396     PCA-HG HC
397     PCA-CD C
398     PCA-OE O
399     FOR-C C
400     FOR-H H
401     FOR-O O
402     ACE-CA CT
403     ACE-HA HC
404     ACE-C C
405     ACE-O O
406 gezelter 1278 C-Term-N N
407     C-Term-H H
408     N-MeAmide-N N
409     N-MeAmide-H H
410     N-MeAmide-C CT
411     N-MeAmide-H1 H1
412 gezelter 1270 NGLY-N N3
413     NGLY-CA CT
414     NGLY-C C
415     NGLY-HN H
416     NGLY-O O
417     NGLY-HA H1
418     NALA-N N3
419     NALA-CA CT
420     NALA-C C
421     NALA-HN H
422     NALA-O O
423     NALA-HA H1
424     NVAL-N N3
425     NVAL-CA CT
426     NVAL-C C
427     NVAL-HN H
428     NVAL-O O
429     NVAL-HA H1
430     NLEU-N N3
431     NLEU-CA CT
432     NLEU-C C
433     NLEU-HN H
434     NLEU-O O
435     NLEU-HA H1
436     NILE-N N3
437     NILE-CA CT
438     NILE-C C
439     NILE-HN H
440     NILE-O O
441     NILE-HA H1
442     NSER-N N3
443     NSER-CA CT
444     NSER-C C
445     NSER-HN H
446     NSER-O O
447     NSER-HA H1
448     NTHR-N N3
449     NTHR-CA CT
450     NTHR-C C
451     NTHR-HN H
452     NTHR-O O
453     NTHR-HA H1
454     NCYS-N N3
455     NCYS-CA CT
456     NCYS-C C
457     NCYS-HN H
458     NCYS-O O
459     NCYS-HA H1
460     NCYX-N N3
461     NCYX-CA CT
462     NCYX-C C
463     NCYX-HN H
464     NCYX-O O
465     NCYX-HA H1
466     NPRO-N N3
467     NPRO-CA CT
468     NPRO-C C
469     NPRO-HN H
470     NPRO-O O
471     NPRO-HA H1
472     NPRO-CD CT
473     NPRO-HD HP
474     NPHE-N N3
475     NPHE-CA CT
476     NPHE-C C
477     NPHE-HN H
478     NPHE-O O
479     NPHE-HA H1
480     NTYR-N N3
481     NTYR-CA CT
482     NTYR-C C
483     NTYR-HN H
484     NTYR-O O
485     NTYR-HA H1
486     NTRP-N N3
487     NTRP-CA CT
488     NTRP-C C
489     NTRP-HN H
490     NTRP-O O
491     NTRP-HA H1
492     NHIS-N N3
493     NHIS-CA CT
494     NHIS-C C
495     NHIS-HN H
496     NHIS-O O
497     NHIS-HA H1
498     NHID-N N3
499     NHID-CA CT
500     NHID-C C
501     NHID-HN H
502     NHID-O O
503     NHID-HA H1
504     NHIE-N N3
505     NHIE-CA CT
506     NHIE-C C
507     NHIE-HN H
508     NHIE-O O
509     NHIE-HA H1
510     NASP-N N3
511     NASP-CA CT
512     NASP-C C
513     NASP-HN H
514     NASP-O O
515     NASP-HA H1
516     NASN-N N3
517     NASN-CA CT
518     NASN-C C
519     NASN-HN H
520     NASN-O O
521     NASN-HA H1
522     NGLU-N N3
523     NGLU-CA CT
524     NGLU-C C
525     NGLU-HN H
526     NGLU-O O
527     NGLU-HA H1
528 cli2 1289 NGLN-N N3
529     NGLN-CA CT
530     NGLN-C C
531     NGLN-HN H
532     NGLN-O O
533     NGLN-HA H1
534     NGLN-CB CT
535     NGLN-HB HC
536     NGLN-CG CT
537     NGLN-HG HC
538     NGLN-CD C
539     NGLN-OE1 O
540     NGLN-NE2 N
541     NGLN-HE2 H
542 gezelter 1270 NMET-N N3
543     NMET-CA CT
544     NMET-C C
545     NMET-HN H
546     NMET-O O
547     NMET-HA H1
548     NLYS-N N3
549     NLYS-CA CT
550     NLYS-C C
551     NLYS-HN H
552     NLYS-O O
553     NLYS-HA H1
554     NARG-N N3
555     NARG-CA CT
556     NARG-C C
557     NARG-HN H
558     NARG-O O
559     NARG-HA H1
560     NORN-N N3
561     NORN-CA CT
562     NORN-C C
563     NORN-HN H
564     NORN-O O
565     NORN-HA H1
566     NAIB-N N3
567     NAIB-CA CT
568     NAIB-C C
569     NAIB-HN H
570     NAIB-O O
571     CGLY-N N
572     CGLY-CA CT
573     CGLY-C C
574     CGLY-HN H
575     CGLY-OXT O2
576     CGLY-HA H1
577     CALA-N N
578     CALA-CA CT
579     CALA-C C
580     CALA-HN H
581     CALA-OXT O2
582     CALA-HA H1
583     CVAL-N N
584     CVAL-CA CT
585     CVAL-C C
586     CVAL-HN H
587     CVAL-OXT O2
588     CVAL-HA H1
589     CLEU-N N
590     CLEU-CA CT
591     CLEU-C C
592     CLEU-HN H
593     CLEU-OXT O2
594     CLEU-HA H1
595     CILE-N N
596     CILE-CA CT
597     CILE-C C
598     CILE-HN H
599     CILE-OXT O2
600     CILE-HA H1
601     CSER-N N
602     CSER-CA CT
603     CSER-C C
604     CSER-HN H
605     CSER-OXT O2
606     CSER-HA H1
607     CTHR-N N
608     CTHR-CA CT
609     CTHR-C C
610     CTHR-HN H
611     CTHR-OXT O2
612     CTHR-HA H1
613     CCYS-N N
614     CCYS-CA CT
615     CCYS-C C
616     CCYS-HN H
617     CCYS-OXT O2
618     CCYS-HA H1
619     CCYX-N N
620     CCYX-CA CT
621     CCYX-C C
622     CCYX-HN H
623     CCYX-OXT O2
624     CCYX-HA H1
625     CPRO-N N
626     CPRO-CA CT
627     CPRO-C C
628     CPRO-OXT O2
629 cli2 1289 CPRO-O O
630 gezelter 1270 CPRO-HA H1
631 cli2 1289 CPRO-CB CT
632     CPRO-HB HC
633     CPRO-CG CT
634     CPRO-HG HC
635     CPRO-CD CT
636     CPRO-HD H1
637 gezelter 1270 CPHE-N N
638     CPHE-CA CT
639     CPHE-C C
640     CPHE-HN H
641     CPHE-OXT O2
642     CPHE-HA H1
643     CTYR-N N
644     CTYR-CA CT
645     CTYR-C C
646     CTYR-HN H
647     CTYR-OXT O2
648     CTYR-HA H1
649     CTRP-N N
650     CTRP-CA CT
651     CTRP-C C
652     CTRP-HN H
653     CTRP-OXT O2
654     CTRP-HA H1
655     CHIS-N N
656     CHIS-CA CT
657     CHIS-C C
658     CHIS-HN H
659     CHIS-OXT O2
660     CHIS-HA H1
661     CHID-N N
662     CHID-CA CT
663     CHID-C C
664     CHID-HN H
665     CHID-OXT O2
666     CHID-HA H1
667     CHIE-N N
668     CHIE-CA CT
669     CHIE-C C
670     CHIE-HN H
671     CHIE-OXT O2
672     CHIE-HA H1
673     CASP-N N
674     CASP-CA CT
675     CASP-C C
676     CASP-HN H
677     CASP-OXT O2
678     CASP-HA H1
679     CASN-N N
680     CASN-CA CT
681     CASN-C C
682     CASN-HN H
683     CASN-OXT O2
684     CASN-HA H1
685     CGLU-N N
686     CGLU-CA CT
687     CGLU-C C
688     CGLU-HN H
689     CGLU-OXT O2
690     CGLU-HA H1
691     CGLN-N N
692     CGLN-CA CT
693     CGLN-C C
694     CGLN-HN H
695     CGLN-OXT O2
696     CGLN-HA H1
697     CMET-N N
698     CMET-CA CT
699     CMET-C C
700     CMET-HN H
701     CMET-OXT O2
702     CMET-HA H1
703     CLYS-N N
704     CLYS-CA CT
705     CLYS-C C
706     CLYS-HN H
707     CLYS-OXT O2
708     CLYS-HA H1
709     CARG-N N
710     CARG-CA CT
711     CARG-C C
712     CARG-HN H
713     CARG-OXT O2
714     CARG-HA H1
715     CORN-N N
716     CORN-CA CT
717     CORN-C C
718     CORN-HN H
719     CORN-OXT O2
720     CORN-HA H1
721     CAIB-N N
722     CAIB-CA CT
723     CAIB-C C
724     CAIB-HN H
725     CAIB-OXT O2
726     RA-O5' OS
727     RA-C5' CT
728     RA-H5'1 H1
729     RA-H5'2 H1
730     RA-C4' CT
731     RA-H4' H1
732     RA-O4' OS
733     RA-C1' CT
734     RA-H1' H2
735     RA-C3' CT
736     RA-H3' H1
737     RA-C2' CT
738     RA-H2'1 H1
739     RA-O2' OH
740     RA-HO'2 HO
741     RA-O3' OS
742     RA-N9 N*
743     RA-C4 CB
744     RA-C5 CB
745     RA-N7 NB
746     RA-C8 CK
747     RA-N3 NC
748     RA-C2 CQ
749     RA-N1 NC
750     RA-C6 CA
751     RA-H2 H5
752     RA-N6 N2
753     RA-H61 H
754     RA-H62 H
755     RA-H8 H5
756     RG-O5' OS
757     RG-C5' CT
758     RG-H5'1 H1
759     RG-H5'2 H1
760     RG-C4' CT
761     RG-H4' H1
762     RG-O4' OS
763     RG-C1' CT
764     RG-H1' H2
765     RG-C3' CT
766     RG-H3' H1
767     RG-C2' CT
768     RG-H2'1 H1
769     RG-O2' OH
770     RG-HO'2 HO
771     RG-O3' OS
772     RG-N9 N*
773     RG-C4 CB
774     RG-C5 CB
775     RG-N7 NB
776     RG-C8 CK
777     RG-N3 NC
778     RG-C2 CA
779     RG-N1 NA
780     RG-C6 C
781     RG-H1 H
782     RG-N2 N2
783     RG-H21 H
784     RG-H22 H
785     RG-O6 O
786     RG-H8 H5
787     RC-O5' OS
788     RC-C5' CT
789     RC-H5'1 H1
790     RC-H5'2 H1
791     RC-C4' CT
792     RC-H4' H1
793     RC-O4' OS
794     RC-C1' CT
795     RC-H1' H2
796     RC-C3' CT
797     RC-H3' H1
798     RC-C2' CT
799     RC-H2'1 H1
800     RC-O2' OH
801     RC-HO'2 HO
802     RC-O3' OS
803     RC-N1 N*
804     RC-C2 C
805     RC-N3 NC
806     RC-C4 CA
807     RC-C5 CM
808     RC-C6 CM
809     RC-O2 O
810     RC-N4 N2
811     RC-H41 H
812     RC-H42 H
813     RC-H5 HA
814     RC-H6 H4
815     RU-O5' OS
816     RU-C5' CT
817     RU-H5'1 H1
818     RU-H5'2 H1
819     RU-C4' CT
820     RU-H4' H1
821     RU-O4' OS
822     RU-C1' CT
823     RU-H1' H2
824     RU-C3' CT
825     RU-H3' H1
826     RU-C2' CT
827     RU-H2'1 H1
828     RU-O2' OH
829     RU-HO'2 HO
830     RU-O3' OS
831     RU-N1 N*
832     RU-C2 C
833     RU-N3 NA
834     RU-C4 C
835     RU-C5 CM
836     RU-C6 CM
837     RU-O2 O
838     RU-H3 H
839     RU-O4 O
840     RU-H5 HA
841     RU-H6 H4
842     DA-O5' OS
843     DA-C5' CT
844     DA-H5'1 H1
845     DA-H5'2 H1
846     DA-C4' CT
847     DA-H4' H1
848     DA-O4' OS
849     DA-C1' CT
850     DA-H1' H2
851     DA-C3' CT
852     DA-H3' H1
853     DA-C2' CT
854     DA-H2'1 HC
855     DA-H2'2 HC
856     DA-O3' OS
857     DA-N9 N*
858     DA-C4 CB
859     DA-C5 CB
860     DA-N7 NB
861     DA-C8 CK
862     DA-N3 NC
863     DA-C2 CQ
864     DA-N1 NC
865     DA-C6 CA
866     DA-H2 H5
867     DA-N6 N2
868     DA-H61 H
869     DA-H62 H
870     DA-H8 H5
871     DG-O5' OS
872     DG-C5' CT
873     DG-H5'1 H1
874     DG-H5'2 H1
875     DG-C4' CT
876     DG-H4' H1
877     DG-O4' OS
878     DG-C1' CT
879     DG-H1' H2
880     DG-C3' CT
881     DG-H3' H1
882     DG-C2' CT
883     DG-H2'1 HC
884     DG-H2'2 HC
885     DG-O3' OS
886     DG-N9 N*
887     DG-C4 CB
888     DG-C5 CB
889     DG-N7 NB
890     DG-C8 CK
891     DG-N3 NC
892     DG-C2 CA
893     DG-N1 NA
894     DG-C6 C
895     DG-H1 H
896     DG-N2 N2
897     DG-H21 H
898     DG-H22 H
899     DG-O6 O
900     DG-H8 H5
901     DC-O5' OS
902     DC-C5' CT
903     DC-H5'1 H1
904     DC-H5'2 H1
905     DC-C4' CT
906     DC-H4' H1
907     DC-O4' OS
908     DC-C1' CT
909     DC-H1' H2
910     DC-C3' CT
911     DC-H3' H1
912     DC-C2' CT
913     DC-H2'1 HC
914     DC-H2'2 HC
915     DC-O3' OS
916     DC-N1 N*
917     DC-C2 C
918     DC-N3 NC
919     DC-C4 CA
920     DC-C5 CM
921     DC-C6 CM
922     DC-O2 O
923     DC-N4 N2
924     DC-H41 H
925     DC-H42 H
926     DC-H5 HA
927     DC-H6 H4
928     DT-O5' OS
929     DT-C5' CT
930     DT-H5'1 H1
931     DT-H5'2 H1
932     DT-C4' CT
933     DT-H4' H1
934     DT-O4' OS
935     DT-C1' CT
936     DT-H1' H2
937     DT-C3' CT
938     DT-H3' H1
939     DT-C2' CT
940     DT-H2'1 HC
941     DT-H2'2 HC
942     DT-O3' OS
943     DT-N1 N*
944     DT-C2 C
945     DT-N3 NA
946     DT-C4 C
947     DT-C5 CM
948     DT-C6 CM
949     DT-O2 O
950     DT-H3 H
951     DT-O4 O
952     DT-C7 CT
953     DT-H7 HC
954     DT-H6 H4
955 gezelter 1278 R-Phosphodiester-P P
956     R-Phosphodiester-O O2
957 gezelter 1270 R5H-O5' OH
958     R5H-H5T HO
959     R5P-O5' OS
960     R5P-P P
961     R5P-OP O2
962     R3H-O3' OH
963     R3H-H3T HO
964     R3P-O3' OS
965     R3P-P P
966     R3P-OP O2
967 gezelter 1278 D-Phosphodiester-P P
968     D-Phosphodiester-O O2
969 gezelter 1270 D5H-O5' OH
970     D5H-H5T HO
971     D5P-O5' OS
972     D5P-P P
973     D5P-OP O2
974     D3H-O3' OH
975     D3H-H3T HO
976     D3P-O3' OS
977     D3P-P P
978     D3P-OP O2
979 gezelter 1278 TIP3P-O OW
980     TIP3P-H HW
981 gezelter 1363 O_TIP3P OW
982     O_TIP4P OW
983     O_TIP4P-Ew OW
984     O_TIP5P OW
985     O_TIP5P-E OW
986     O_SPCE OW
987     O_SPC OW
988     H_TIP3P HW
989     H_TIP4P HW
990     H_TIP4P-Ew HW
991     H_TIP5P HW
992     H_SPCE HW
993     H_SPC HW
994     EP_TIP4P EP
995     EP_TIP4P-Ew EP
996     EP_TIP5P EP
997 gezelter 1270 end AtomTypes
998    
999    
1000     begin ChargeAtomTypes
1001     //name charge
1002 gezelter 1563 HO 0.435
1003     OH -0.7
1004 gezelter 1418 O2 -0.5
1005     C 0.55
1006 gezelter 1270 GLY-N -0.4157
1007     GLY-CA -0.0252
1008     GLY-C 0.5973
1009     GLY-HN 0.2719
1010     GLY-O -0.5679
1011     GLY-HA 0.0698
1012     ALA-N -0.4157
1013     ALA-CA 0.0337
1014     ALA-C 0.5973
1015     ALA-HN 0.2719
1016     ALA-O -0.5679
1017     ALA-HA 0.0823
1018     ALA-CB -0.1825
1019     ALA-HB 0.0603
1020     VAL-N -0.4157
1021     VAL-CA -0.0875
1022     VAL-C 0.5973
1023     VAL-HN 0.2719
1024     VAL-O -0.5679
1025     VAL-HA 0.0969
1026     VAL-CB 0.2985
1027     VAL-HB -0.0297
1028 cli2 1289 VAL-CG -0.3192
1029     VAL-HG 0.0791
1030 gezelter 1270 LEU-N -0.4157
1031     LEU-CA -0.0518
1032     LEU-C 0.5973
1033     LEU-HN 0.2719
1034     LEU-O -0.5679
1035     LEU-HA 0.0922
1036     LEU-CB -0.1102
1037     LEU-HB 0.0457
1038     LEU-CG 0.3531
1039     LEU-HG -0.0361
1040 cli2 1289 LEU-CD -0.4121
1041     LEU-HD 0.1000
1042 gezelter 1270 ILE-N -0.4157
1043     ILE-CA -0.0597
1044     ILE-C 0.5973
1045     ILE-HN 0.2719
1046     ILE-O -0.5679
1047     ILE-HA 0.0869
1048     ILE-CB 0.1303
1049     ILE-HB 0.0187
1050     ILE-CG1 -0.0430
1051     ILE-HG1 0.0236
1052     ILE-CG2 -0.3204
1053     ILE-HG2 0.0882
1054     ILE-CD -0.0660
1055     ILE-HD 0.0186
1056     SER-N -0.4157
1057     SER-CA -0.0249
1058     SER-C 0.5973
1059     SER-HN 0.2719
1060     SER-O -0.5679
1061     SER-HA 0.0843
1062     SER-CB 0.2117
1063     SER-HB 0.0352
1064     SER-OG -0.6546
1065     SER-HG 0.4275
1066     THR-N -0.4157
1067     THR-CA -0.0389
1068     THR-C 0.5973
1069     THR-HN 0.2719
1070     THR-O -0.5679
1071     THR-HA 0.1007
1072     THR-CB 0.3654
1073     THR-HB 0.0043
1074     THR-OG1 -0.6761
1075     THR-HG1 0.4102
1076     THR-CG2 -0.2438
1077     THR-HG2 0.0642
1078     CYS-N -0.4157
1079     CYS-CA 0.0213
1080     CYS-C 0.5973
1081     CYS-HN 0.2719
1082     CYS-O -0.5679
1083     CYS-HA 0.1124
1084     CYS-CB -0.1231
1085     CYS-HB 0.1112
1086     CYS-SG -0.3119
1087     CYS-HG 0.1933
1088     CYX-N -0.4157
1089     CYX-CA 0.0429
1090     CYX-C 0.5973
1091     CYX-HN 0.2719
1092     CYX-O -0.5679
1093     CYX-HA 0.0766
1094     CYX-CB -0.0790
1095     CYX-HB 0.0910
1096     CYX-SG -0.1081
1097     PRO-N -0.2548
1098     PRO-CA -0.0266
1099     PRO-C 0.5896
1100     PRO-O -0.5748
1101     PRO-HA 0.0641
1102     PRO-CB -0.0070
1103     PRO-HB 0.0253
1104     PRO-CG 0.0189
1105     PRO-HG 0.0213
1106     PRO-CD 0.0192
1107     PRO-HD 0.0391
1108     PHE-N -0.4157
1109     PHE-CA -0.0024
1110     PHE-C 0.5973
1111     PHE-HN 0.2719
1112     PHE-O -0.5679
1113     PHE-HA 0.0978
1114     PHE-CB -0.0343
1115     PHE-HB 0.0295
1116     PHE-CG 0.0118
1117     PHE-CD -0.1256
1118     PHE-HD 0.1330
1119     PHE-CE -0.1704
1120     PHE-HE 0.1430
1121     PHE-CZ -0.1072
1122     PHE-HZ 0.1297
1123     TYR-N -0.4157
1124     TYR-CA -0.0014
1125     TYR-C 0.5973
1126     TYR-HN 0.2719
1127     TYR-O -0.5679
1128     TYR-HA 0.0876
1129     TYR-CB -0.0152
1130     TYR-HB 0.0295
1131     TYR-CG -0.0011
1132     TYR-CD -0.1906
1133     TYR-HD 0.1699
1134     TYR-CE -0.2341
1135     TYR-HE 0.1656
1136     TYR-CZ 0.3226
1137     TYR-OH -0.5579
1138 cli2 1289 TYR-HO 0.3992
1139 gezelter 1270 TRP-N -0.4157
1140     TRP-CA -0.0275
1141     TRP-C 0.5973
1142     TRP-HN 0.2719
1143     TRP-O -0.5679
1144     TRP-HA 0.1123
1145     TRP-CB -0.0050
1146     TRP-HB 0.0339
1147     TRP-CG -0.1415
1148     TRP-CD1 -0.1638
1149     TRP-HD1 0.2062
1150     TRP-CD2 0.1243
1151     TRP-NE1 -0.3418
1152     TRP-HE1 0.3412
1153     TRP-CE2 0.1380
1154     TRP-CE3 -0.2387
1155     TRP-HE3 0.1700
1156     TRP-CZ2 -0.2601
1157     TRP-HZ2 0.1572
1158     TRP-CZ3 -0.1972
1159     TRP-HZ3 0.1447
1160     TRP-CH2 -0.1134
1161     TRP-HH2 0.1417
1162     HIS-N -0.3479
1163     HIS-CA -0.1354
1164     HIS-C 0.7341
1165     HIS-HN 0.2747
1166     HIS-O -0.5894
1167     HIS-HA 0.1212
1168     HIS-CB -0.0414
1169     HIS-HB 0.0810
1170     HIS-CG -0.0012
1171     HIS-ND1 -0.1513
1172     HIS-HD1 0.3866
1173     HIS-CD2 -0.1141
1174     HIS-HD2 0.2317
1175     HIS-CE1 -0.0170
1176     HIS-HE1 0.2681
1177     HIS-NE2 -0.1718
1178     HIS-HE2 0.3911
1179     HID-N -0.4157
1180     HID-CA 0.0188
1181     HID-C 0.5973
1182     HID-HN 0.2719
1183     HID-O -0.5679
1184     HID-HA 0.0881
1185     HID-CB -0.0462
1186     HID-HB 0.0402
1187     HID-CG -0.0266
1188     HID-ND1 -0.3811
1189     HID-HD1 0.3649
1190     HID-CD2 0.1292
1191     HID-HD2 0.1147
1192     HID-CE1 0.2057
1193     HID-HE1 0.1392
1194     HID-NE2 -0.5727
1195     HIE-N -0.4157
1196     HIE-CA -0.0581
1197     HIE-C 0.5973
1198     HIE-HN 0.2719
1199     HIE-O -0.5679
1200     HIE-HA 0.1360
1201     HIE-CB -0.0074
1202     HIE-HB 0.0367
1203     HIE-CG 0.1868
1204     HIE-ND1 -0.5432
1205     HIE-CD2 -0.2207
1206     HIE-HD2 0.1862
1207     HIE-CE1 0.1635
1208     HIE-HE1 0.1435
1209     HIE-NE2 -0.2795
1210     HIE-HE2 0.3339
1211     ASP-N -0.5163
1212     ASP-CA 0.0381
1213     ASP-C 0.5366
1214     ASP-HN 0.2936
1215     ASP-O -0.5819
1216     ASP-HA 0.0880
1217     ASP-CB -0.0303
1218     ASP-HB -0.0122
1219     ASP-CG 0.7994
1220     ASP-OD -0.8014
1221     ASN-N -0.4157
1222     ASN-CA 0.0143
1223     ASN-C 0.5973
1224     ASN-HN 0.2719
1225     ASN-O -0.5679
1226     ASN-HA 0.1048
1227     ASN-CB -0.2041
1228     ASN-HB 0.0797
1229     ASN-CG 0.7130
1230     ASN-OD1 -0.5931
1231     ASN-ND2 -0.9191
1232     ASN-HD2 0.4196
1233     GLU-N -0.5163
1234     GLU-CA 0.0397
1235     GLU-C 0.5366
1236     GLU-HN 0.2936
1237     GLU-O -0.5819
1238     GLU-HA 0.1105
1239     GLU-CB 0.0560
1240     GLU-HB -0.0173
1241     GLU-CG 0.0136
1242     GLU-HG -0.0425
1243     GLU-CD 0.8054
1244     GLU-OE -0.8188
1245     GLN-N -0.4157
1246     GLN-CA -0.0031
1247     GLN-C 0.5973
1248     GLN-HN 0.2719
1249     GLN-O -0.5679
1250     GLN-HA 0.0850
1251     GLN-CB -0.0036
1252     GLN-HB 0.0171
1253     GLN-CG -0.0645
1254     GLN-HG 0.0352
1255     GLN-CD 0.6951
1256     GLN-OE1 -0.6086
1257     GLN-NE2 -0.9407
1258     GLN-HE2 0.4251
1259     MET-N -0.4157
1260     MET-CA -0.0237
1261     MET-C 0.5973
1262     MET-HN 0.2719
1263     MET-O -0.5679
1264     MET-HA 0.0880
1265     MET-CB 0.0342
1266     MET-HB 0.0241
1267     MET-CG 0.0018
1268     MET-HG 0.0440
1269     MET-SD -0.2737
1270     MET-CE -0.0536
1271     MET-HE 0.0684
1272     LYS-N -0.3479
1273     LYS-CA -0.2400
1274     LYS-C 0.7341
1275     LYS-HN 0.2747
1276     LYS-O -0.5894
1277     LYS-HA 0.1426
1278     LYS-CB -0.0094
1279     LYS-HB 0.0362
1280     LYS-CG 0.0187
1281     LYS-HG 0.0103
1282     LYS-CD -0.0479
1283     LYS-HD 0.0621
1284     LYS-CE -0.0143
1285     LYS-HE 0.1135
1286     LYS-NZ -0.3854
1287     LYS-HZ 0.3400
1288     ARG-N -0.3479
1289     ARG-CA -0.2637
1290     ARG-C 0.7341
1291     ARG-HN 0.2747
1292     ARG-O -0.5894
1293     ARG-HA 0.1560
1294     ARG-CB -0.0007
1295     ARG-HB 0.0327
1296     ARG-CG 0.0390
1297     ARG-HG 0.0285
1298     ARG-CD 0.0486
1299     ARG-HD 0.0687
1300     ARG-NE -0.5295
1301     ARG-HE 0.3456
1302     ARG-CZ 0.8076
1303     ARG-NH -0.8627
1304     ARG-HH 0.4478
1305     ORN-N -0.3479
1306     ORN-CA -0.2400
1307     ORN-C 0.7341
1308     ORN-HN 0.2747
1309     ORN-O -0.5894
1310     ORN-HA 0.1426
1311     ORN-CB 0.0099
1312     ORN-HB 0.0362
1313     ORN-CG -0.0279
1314     ORN-HG 0.0621
1315     ORN-CD -0.0143
1316     ORN-HD 0.1135
1317     ORN-NE -0.3854
1318     ORN-HE 0.3400
1319     MAA-N -0.4157
1320     MAA-CA 0.1032
1321     MAA-C 0.5973
1322     MAA-HN 0.2719
1323     MAA-O -0.5679
1324     MAA-CB -0.2503
1325     MAA-HB 0.0853
1326     PCA-N -0.4157
1327     PCA-CA -0.0371
1328     PCA-C 0.5973
1329     PCA-HN 0.2719
1330     PCA-O -0.5679
1331     PCA-HA 0.0850
1332     PCA-CB -0.0036
1333     PCA-HB 0.0171
1334     PCA-CG -0.0645
1335     PCA-HG 0.0352
1336     PCA-CD 0.6000
1337     PCA-OE -0.5700
1338     FOR-C 0.5500
1339     FOR-H 0.0000
1340     FOR-O -0.5500
1341     ACE-CA -0.3662
1342     ACE-HA 0.1123
1343     ACE-C 0.5972
1344     ACE-O -0.5679
1345 gezelter 1278 C-Term-N -0.8400
1346     C-Term-H 0.4200
1347     N-MeAmide-N -0.4157
1348     N-MeAmide-H 0.2719
1349     N-MeAmide-C -0.1490
1350     N-MeAmide-H1 0.0976
1351 gezelter 1270 NGLY-N 0.2943
1352     NGLY-CA -0.0100
1353     NGLY-C 0.6163
1354     NGLY-HN 0.1642
1355     NGLY-O -0.5722
1356     NGLY-HA 0.0895
1357     NALA-N 0.1414
1358     NALA-CA 0.1281
1359     NALA-C 0.6163
1360     NALA-HN 0.1997
1361     NALA-O -0.5722
1362     NALA-HA 0.0889
1363     NVAL-N 0.0577
1364     NVAL-CA 0.0023
1365     NVAL-C 0.6163
1366     NVAL-HN 0.2272
1367     NVAL-O -0.5722
1368     NVAL-HA 0.1093
1369     NLEU-N 0.1010
1370     NLEU-CA 0.0343
1371     NLEU-C 0.6123
1372     NLEU-HN 0.2148
1373     NLEU-O -0.5713
1374     NLEU-HA 0.1053
1375     NILE-N 0.0311
1376     NILE-CA 0.0389
1377     NILE-C 0.6123
1378     NILE-HN 0.2329
1379     NILE-O -0.5713
1380     NILE-HA 0.1031
1381     NSER-N 0.1849
1382     NSER-CA 0.0684
1383     NSER-C 0.6163
1384     NSER-HN 0.1898
1385     NSER-O -0.5722
1386     NSER-HA 0.0782
1387     NTHR-N 0.1812
1388     NTHR-CA 0.0332
1389     NTHR-C 0.6163
1390     NTHR-HN 0.1934
1391     NTHR-O -0.5722
1392     NTHR-HA 0.1087
1393     NCYS-N 0.1325
1394     NCYS-CA 0.0978
1395     NCYS-C 0.6123
1396     NCYS-HN 0.2023
1397     NCYS-O -0.5713
1398     NCYS-HA 0.1411
1399     NCYX-N 0.2096
1400     NCYX-CA 0.1138
1401     NCYX-C 0.6163
1402     NCYX-HN 0.1815
1403     NCYX-O -0.5713
1404     NCYX-HA 0.0922
1405     NPRO-N -0.2020
1406     NPRO-CA 0.1589
1407     NPRO-C 0.5260
1408     NPRO-HN 0.3120
1409     NPRO-O -0.5000
1410     NPRO-HA 0.1000
1411     NPRO-CD -0.0120
1412     NPRO-HD 0.1000
1413     NPHE-N 0.1737
1414     NPHE-CA 0.0859
1415     NPHE-C 0.6123
1416     NPHE-HN 0.1921
1417     NPHE-O -0.5713
1418     NPHE-HA 0.1041
1419     NTYR-N 0.1940
1420     NTYR-CA 0.0766
1421     NTYR-C 0.6123
1422     NTYR-HN 0.1873
1423     NTYR-O -0.5713
1424     NTYR-HA 0.0983
1425     NTRP-N 0.1913
1426     NTRP-CA 0.0555
1427     NTRP-C 0.6123
1428     NTRP-HN 0.1888
1429     NTRP-O -0.5713
1430     NTRP-HA 0.1162
1431     NHIS-N 0.2560
1432     NHIS-CA 0.0653
1433     NHIS-C 0.7214
1434     NHIS-HN 0.1704
1435     NHIS-O -0.6013
1436     NHIS-HA 0.1047
1437     NHID-N 0.1542
1438     NHID-CA 0.1126
1439     NHID-C 0.6123
1440     NHID-HN 0.1963
1441     NHID-O -0.5713
1442     NHID-HA 0.0958
1443     NHIE-N 0.1472
1444     NHIE-CA 0.0325
1445     NHIE-C 0.6123
1446     NHIE-HN 0.2016
1447     NHIE-O -0.5713
1448     NHIE-HA 0.1380
1449     NASP-N 0.0782
1450     NASP-CA 0.0326
1451     NASP-C 0.5621
1452     NASP-HN 0.2200
1453     NASP-O -0.5889
1454     NASP-HA 0.1141
1455     NASN-N 0.1801
1456     NASN-CA 0.0811
1457     NASN-C 0.6163
1458     NASN-HN 0.1921
1459     NASN-O -0.5722
1460     NASN-HA 0.1231
1461     NGLU-N 0.0017
1462     NGLU-CA 0.0698
1463     NGLU-C 0.5621
1464     NGLU-HN 0.2391
1465     NGLU-O -0.5889
1466     NGLU-HA 0.1202
1467 cli2 1289 NGLN-N 0.1493
1468     NGLN-CA 0.0769
1469     NGLN-C 0.6123
1470     NGLN-HN 0.1996
1471     NGLN-O -0.5713
1472     NGLN-HA 0.1015
1473 gezelter 1270 NMET-N 0.1592
1474     NMET-CA 0.0429
1475     NMET-C 0.6123
1476     NMET-HN 0.1984
1477     NMET-O -0.5713
1478     NMET-HA 0.1116
1479     NLYS-N 0.0966
1480     NLYS-CA -0.0101
1481     NLYS-C 0.7214
1482     NLYS-HN 0.2165
1483     NLYS-O -0.6013
1484     NLYS-HA 0.1180
1485     NARG-N 0.1305
1486     NARG-CA -0.0359
1487     NARG-C 0.7214
1488     NARG-HN 0.2083
1489     NARG-O -0.6013
1490     NARG-HA 0.1242
1491     NORN-N 0.0966
1492     NORN-CA -0.0101
1493     NORN-C 0.7214
1494     NORN-HN 0.2165
1495     NORN-O -0.6013
1496     NORN-HA 0.1180
1497     NAIB-N 0.1000
1498     NAIB-CA 0.2447
1499     NAIB-C 0.6163
1500     NAIB-HN 0.2000
1501     NAIB-O -0.5722
1502     CGLY-N -0.3821
1503     CGLY-CA -0.2493
1504     CGLY-C 0.7231
1505     CGLY-HN 0.2681
1506     CGLY-OXT -0.7855
1507     CGLY-HA 0.1056
1508     CALA-N -0.3821
1509     CALA-CA -0.1532
1510     CALA-C 0.7731
1511     CALA-HN 0.2681
1512     CALA-OXT -0.8055
1513     CALA-HA 0.1067
1514     CVAL-N -0.3821
1515     CVAL-CA -0.3352
1516     CVAL-C 0.8350
1517     CVAL-HN 0.2681
1518     CVAL-OXT -0.8173
1519     CVAL-HA 0.1438
1520     CLEU-N -0.3821
1521     CLEU-CA -0.2874
1522     CLEU-C 0.8326
1523     CLEU-HN 0.2681
1524     CLEU-OXT -0.8199
1525     CLEU-HA 0.1346
1526     CILE-N -0.3821
1527     CILE-CA -0.3070
1528     CILE-C 0.8343
1529     CILE-HN 0.2681
1530     CILE-OXT -0.8190
1531     CILE-HA 0.1375
1532     CSER-N -0.3821
1533     CSER-CA -0.2563
1534     CSER-C 0.8113
1535     CSER-HN 0.2681
1536     CSER-OXT -0.8132
1537     CSER-HA 0.1304
1538     CTHR-N -0.3821
1539     CTHR-CA -0.2315
1540     CTHR-C 0.7810
1541     CTHR-HN 0.2681
1542     CTHR-OXT -0.8044
1543     CTHR-HA 0.1207
1544     CCYS-N -0.3821
1545     CCYS-CA -0.1598
1546     CCYS-C 0.7497
1547     CCYS-HN 0.2681
1548     CCYS-OXT -0.7981
1549     CCYS-HA 0.1396
1550     CCYX-N -0.3821
1551     CCYX-CA -0.1283
1552     CCYX-C 0.7618
1553     CCYX-HN 0.2681
1554     CCYX-OXT -0.8041
1555     CCYX-HA 0.0938
1556     CPRO-N -0.2802
1557     CPRO-CA -0.1236
1558     CPRO-C 0.6631
1559     CPRO-OXT -0.7697
1560     CPRO-HA 0.0776
1561     CPHE-N -0.3821
1562     CPHE-CA -0.1756
1563     CPHE-C 0.7660
1564     CPHE-HN 0.2681
1565     CPHE-OXT -0.8026
1566     CPHE-HA 0.1098
1567     CTYR-N -0.3821
1568     CTYR-CA -0.1911
1569     CTYR-C 0.7817
1570     CTYR-HN 0.2681
1571     CTYR-OXT -0.8070
1572     CTYR-HA 0.1092
1573     CTRP-N -0.3821
1574     CTRP-CA -0.2064
1575     CTRP-C 0.7658
1576     CTRP-HN 0.2681
1577     CTRP-OXT -0.8011
1578     CTRP-HA 0.1272
1579     CHIS-N -0.3481
1580     CHIS-CA -0.1503
1581     CHIS-C 0.8032
1582     CHIS-HN 0.2764
1583     CHIS-OXT -0.8177
1584     CHIS-HA 0.1115
1585     CHID-N -0.3821
1586     CHID-CA -0.1618
1587     CHID-C 0.7615
1588     CHID-HN 0.2681
1589     CHID-OXT -0.8016
1590     CHID-HA 0.1100
1591     CHIE-N -0.3821
1592     CHIE-CA -0.2661
1593     CHIE-C 0.7916
1594     CHIE-HN 0.2681
1595     CHIE-OXT -0.8065
1596     CHIE-HA 0.1650
1597     CASP-N -0.5192
1598     CASP-CA -0.1810
1599     CASP-C 0.7256
1600     CASP-HN 0.3055
1601     CASP-OXT -0.7887
1602     CASP-HA 0.1046
1603     CASN-N -0.3821
1604     CASN-CA -0.1927
1605     CASN-C 0.8050
1606     CASN-HN 0.2681
1607     CASN-OXT -0.8147
1608     CASN-HA 0.1358
1609     CGLU-N -0.5192
1610     CGLU-CA -0.2000
1611     CGLU-C 0.7420
1612     CGLU-HN 0.3055
1613     CGLU-OXT -0.7930
1614     CGLU-HA 0.1399
1615     CGLN-N -0.3821
1616     CGLN-CA -0.2108
1617     CGLN-C 0.7775
1618     CGLN-HN 0.2681
1619     CGLN-OXT -0.8042
1620     CGLN-HA 0.1232
1621     CMET-N -0.3821
1622     CMET-CA -0.2441
1623     CMET-C 0.8013
1624     CMET-HN 0.2681
1625     CMET-OXT -0.8105
1626     CMET-HA 0.1277
1627     CLYS-N -0.3481
1628     CLYS-CA -0.2964
1629     CLYS-C 0.8488
1630     CLYS-HN 0.2764
1631     CLYS-OXT -0.8252
1632     CLYS-HA 0.1438
1633     CARG-N -0.3481
1634     CARG-CA -0.3117
1635     CARG-C 0.8557
1636     CARG-HN 0.2764
1637     CARG-OXT -0.8266
1638     CARG-HA 0.1447
1639     CORN-N -0.3481
1640     CORN-CA -0.2964
1641     CORN-C 0.8488
1642     CORN-HN 0.2764
1643     CORN-OXT -0.8252
1644     CORN-HA 0.1438
1645     CAIB-N -0.3821
1646     CAIB-CA -0.0572
1647     CAIB-C 0.8000
1648     CAIB-HN 0.2681
1649     CAIB-OXT -0.8200
1650     RA-O5' -0.4989
1651     RA-C5' 0.0558
1652     RA-H5'1 0.0679
1653     RA-H5'2 0.0679
1654     RA-C4' 0.1065
1655     RA-H4' 0.1174
1656     RA-O4' -0.3548
1657     RA-C1' 0.0394
1658     RA-H1' 0.2007
1659     RA-C3' 0.2022
1660     RA-H3' 0.0615
1661     RA-C2' 0.0670
1662     RA-H2'1 0.0972
1663     RA-O2' -0.6139
1664     RA-HO'2 0.4186
1665     RA-O3' -0.5246
1666     RA-N9 -0.0251
1667     RA-C4 0.3053
1668     RA-C5 0.0515
1669     RA-N7 -0.6073
1670     RA-C8 0.2006
1671     RA-N3 -0.6997
1672     RA-C2 0.5875
1673     RA-N1 -0.7615
1674     RA-C6 0.7009
1675     RA-H2 0.0473
1676     RA-N6 -0.9019
1677     RA-H61 0.4115
1678     RA-H62 0.4115
1679     RA-H8 0.1553
1680     RG-O5' -0.4989
1681     RG-C5' 0.0558
1682     RG-H5'1 0.0679
1683     RG-H5'2 0.0679
1684     RG-C4' 0.1065
1685     RG-H4' 0.1174
1686     RG-O4' -0.3548
1687     RG-C1' 0.0191
1688     RG-H1' 0.2006
1689     RG-C3' 0.2022
1690     RG-H3' 0.0615
1691     RG-C2' 0.0670
1692     RG-H2'1 0.0972
1693     RG-O2' -0.6139
1694     RG-HO'2 0.4186
1695     RG-O3' -0.5246
1696     RG-N9 0.0492
1697     RG-C4 0.1222
1698     RG-C5 0.1744
1699     RG-N7 -0.5709
1700     RG-C8 0.1374
1701     RG-N3 -0.6323
1702     RG-C2 0.7657
1703     RG-N1 -0.4787
1704     RG-C6 0.4770
1705     RG-H1 0.3424
1706     RG-N2 -0.9672
1707     RG-H21 0.4364
1708     RG-H22 0.4364
1709     RG-O6 -0.5597
1710     RG-H8 0.1640
1711     RC-O5' -0.4989
1712     RC-C5' 0.0558
1713     RC-H5'1 0.0679
1714     RC-H5'2 0.0679
1715     RC-C4' 0.1065
1716     RC-H4' 0.1174
1717     RC-O4' -0.3548
1718     RC-C1' 0.0066
1719     RC-H1' 0.2029
1720     RC-C3' 0.2022
1721     RC-H3' 0.0615
1722     RC-C2' 0.0670
1723     RC-H2'1 0.0972
1724     RC-O2' -0.6139
1725     RC-HO'2 0.4186
1726     RC-O3' -0.5246
1727     RC-N1 -0.0484
1728     RC-C2 0.7538
1729     RC-N3 -0.7584
1730     RC-C4 0.8185
1731     RC-C5 -0.5215
1732     RC-C6 0.0053
1733     RC-O2 -0.6252
1734     RC-N4 -0.9530
1735     RC-H41 0.4234
1736     RC-H42 0.4234
1737     RC-H5 0.1928
1738     RC-H6 0.1958
1739     RU-O5' -0.4989
1740     RU-C5' 0.0558
1741     RU-H5'1 0.0679
1742     RU-H5'2 0.0679
1743     RU-C4' 0.1065
1744     RU-H4' 0.1174
1745     RU-O4' -0.3548
1746     RU-C1' 0.0674
1747     RU-H1' 0.1824
1748     RU-C3' 0.2022
1749     RU-H3' 0.0615
1750     RU-C2' 0.0670
1751     RU-H2'1 0.0972
1752     RU-O2' -0.6139
1753     RU-HO'2 0.4186
1754     RU-O3' -0.5246
1755     RU-N1 0.0418
1756     RU-C2 0.4687
1757     RU-N3 -0.3549
1758     RU-C4 0.5952
1759     RU-C5 -0.3635
1760     RU-C6 -0.1126
1761     RU-O2 -0.5477
1762     RU-H3 0.3154
1763     RU-O4 -0.5761
1764     RU-H5 0.1811
1765     RU-H6 0.2188
1766     DA-O5' -0.4954
1767     DA-C5' -0.0069
1768     DA-H5'1 0.0754
1769     DA-H5'2 0.0754
1770     DA-C4' 0.1629
1771     DA-H4' 0.1176
1772     DA-O4' -0.3691
1773     DA-C1' 0.0431
1774     DA-H1' 0.1838
1775     DA-C3' 0.0713
1776     DA-H3' 0.0985
1777     DA-C2' -0.0854
1778     DA-H2'1 0.0718
1779     DA-H2'2 0.0718
1780     DA-O3' -0.5232
1781     DA-N9 -0.0268
1782     DA-C4 0.3800
1783     DA-C5 0.0725
1784     DA-N7 -0.6175
1785     DA-C8 0.1607
1786     DA-N3 -0.7417
1787     DA-C2 0.5716
1788     DA-N1 -0.7624
1789     DA-C6 0.6897
1790     DA-H2 0.0598
1791     DA-N6 -0.9123
1792     DA-H61 0.4167
1793     DA-H62 0.4167
1794     DA-H8 0.1877
1795     DG-O5' -0.4954
1796     DG-C5' -0.0069
1797     DG-H5'1 0.0754
1798     DG-H5'2 0.0754
1799     DG-C4' 0.1629
1800     DG-H4' 0.1176
1801     DG-O4' -0.3691
1802     DG-C1' 0.0358
1803     DG-H1' 0.1746
1804     DG-C3' 0.0713
1805     DG-H3' 0.0985
1806     DG-C2' -0.0854
1807     DG-H2'1 0.0718
1808     DG-H2'2 0.0718
1809     DG-O3' -0.5232
1810     DG-N9 0.0577
1811     DG-C4 0.1814
1812     DG-C5 0.1991
1813     DG-N7 -0.5725
1814     DG-C8 0.0736
1815     DG-N3 -0.6636
1816     DG-C2 0.7432
1817     DG-N1 -0.5053
1818     DG-C6 0.4918
1819     DG-H1 0.3520
1820     DG-N2 -0.9230
1821     DG-H21 0.4235
1822     DG-H22 0.4235
1823     DG-O6 -0.5699
1824     DG-H8 0.1997
1825     DC-O5' -0.4954
1826     DC-C5' -0.0069
1827     DC-H5'1 0.0754
1828     DC-H5'2 0.0754
1829     DC-C4' 0.1629
1830     DC-H4' 0.1176
1831     DC-O4' -0.3691
1832     DC-C1' -0.0116
1833     DC-H1' 0.1963
1834     DC-C3' 0.0713
1835     DC-H3' 0.0985
1836     DC-C2' -0.0854
1837     DC-H2'1 0.0718
1838     DC-H2'2 0.0718
1839     DC-O3' -0.5232
1840     DC-N1 -0.0339
1841     DC-C2 0.7959
1842     DC-N3 -0.7748
1843     DC-C4 0.8439
1844     DC-C5 -0.5222
1845     DC-C6 -0.0183
1846     DC-O2 -0.6548
1847     DC-N4 -0.9773
1848     DC-H41 0.4314
1849     DC-H42 0.4314
1850     DC-H5 0.1863
1851     DC-H6 0.2293
1852     DT-O5' -0.4954
1853     DT-C5' -0.0069
1854     DT-H5'1 0.0754
1855     DT-H5'2 0.0754
1856     DT-C4' 0.1629
1857     DT-H4' 0.1176
1858     DT-O4' -0.3691
1859     DT-C1' 0.0680
1860     DT-H1' 0.1804
1861     DT-C3' 0.0713
1862     DT-H3' 0.0985
1863     DT-C2' -0.0854
1864     DT-H2'1 0.0718
1865     DT-H2'2 0.0718
1866     DT-O3' -0.5232
1867     DT-N1 -0.0239
1868     DT-C2 0.5677
1869     DT-N3 -0.4340
1870     DT-C4 0.5194
1871     DT-C5 0.0025
1872     DT-C6 -0.2209
1873     DT-O2 -0.5881
1874     DT-H3 0.3420
1875     DT-O4 -0.5563
1876     DT-C7 -0.2269
1877     DT-H7 0.0770
1878     DT-H6 0.2607
1879 gezelter 1278 R-Phosphodiester-P 1.1662
1880     R-Phosphodiester-O -0.7760
1881 gezelter 1270 R5H-O5' -0.6223
1882     R5H-H5T 0.4295
1883     R5P-O5' -0.6328
1884     R5P-P 0.9000
1885     R5P-OP -0.8200
1886     R3H-O3' -0.6541
1887     R3H-H3T 0.4376
1888     R3P-O3' -0.6565
1889     R3P-P 0.9000
1890     R3P-OP -0.8200
1891 gezelter 1278 D-Phosphodiester-P 1.1659
1892     D-Phosphodiester-O -0.7761
1893 gezelter 1270 D5H-O5' -0.6318
1894     D5H-H5T 0.4422
1895     D5P-O5' -0.6296
1896     D5P-P 0.9000
1897     D5P-OP -0.8200
1898     D3H-O3' -0.6549
1899     D3H-H3T 0.4396
1900     D3P-O3' -0.6553
1901     D3P-P 0.9000
1902     D3P-OP -0.8200
1903 gezelter 1278 TIP3P-O -0.834
1904     TIP3P-H 0.417
1905 gezelter 1363 O_TIP3P -0.834
1906     O_SPCE -0.8476
1907     O_SPC -0.82
1908     H_TIP3P 0.417
1909     H_TIP4P 0.520
1910     H_TIP4P-Ew 0.52422
1911     H_TIP5P 0.241
1912     H_SPCE 0.4238
1913     H_SPC 0.42
1914     EP_TIP4P -1.040
1915     EP_TIP4P-Ew -1.04844
1916     EP_TIP5P -0.241
1917 gezelter 1270 Li+ 1.000
1918     Na+ 1.000
1919     K+ 1.000
1920     Rb+ 1.000
1921     Cs+ 1.000
1922     Mg+2 2.000
1923     Ca+2 2.000
1924     Zn+2 2.000
1925     Cl- -1.000
1926 kstocke1 1526 F- -1.000
1927     Br- -1.000
1928     I- -1.000
1929 gezelter 1270 end ChargeAtomTypes
1930    
1931    
1932    
1933     begin LennardJonesAtomTypes
1934     //name epsilon sigma
1935     CT 0.109400 3.399670
1936     C 0.086000 3.399670
1937     CA 0.086000 3.399670
1938     CM 0.086000 3.399670
1939     CC 0.086000 3.399670
1940     CV 0.086000 3.399670
1941     CW 0.086000 3.399670
1942     CR 0.086000 3.399670
1943     CB 0.086000 3.399670
1944     C* 0.086000 3.399670
1945     CN 0.086000 3.399670
1946     CK 0.086000 3.399670
1947     CQ 0.086000 3.399670
1948     N 0.170000 3.249999
1949     NA 0.170000 3.249999
1950     NB 0.170000 3.249999
1951     NC 0.170000 3.249999
1952     N* 0.170000 3.249999
1953     N2 0.170000 3.249999
1954     N3 0.170000 3.340870
1955     OW 0.152000 3.150752
1956 gezelter 1363 O_TIP3P 0.1521 3.15061
1957     O_TIP4P 0.1550 3.15365
1958     O_TIP4P-Ew 0.16275 3.16435
1959     O_TIP5P 0.16 3.12
1960     O_TIP5P-E 0.178 3.097
1961     O_SPCE 0.15532 3.16549
1962     O_SPC 0.15532 3.16549
1963 gezelter 1270 OH 0.210400 3.066473
1964     OS 0.170000 3.000012
1965     O 0.210000 2.959922
1966     O2 0.210000 2.959922
1967     S 0.250000 3.563595
1968     SH 0.250000 3.563595
1969     P 0.200000 3.741775
1970     H 0.015700 1.069078
1971     HW 0.000000 0.000178
1972     HO 0.000000 0.000178
1973     HS 0.015700 1.069078
1974     HA 0.015000 2.599642
1975     HC 0.015700 2.649533
1976     H1 0.015700 2.471353
1977     H2 0.015700 2.293173
1978     H3 0.015700 2.114994
1979     HP 0.015700 1.959977
1980     H4 0.015000 2.510553
1981     H5 0.015000 2.421463
1982     Li+ 0.018300 2.025904
1983     Na+ 0.002770 3.328398
1984     K+ 0.000328 4.736018
1985     Rb+ 0.000170 5.266993
1986     Cs+ 0.000081 6.049202
1987 gezelter 1278 Mg+2 0.894700 1.412253
1988     Ca+2 0.459789 3.052397
1989     Zn+2 0.012500 1.959977
1990 gezelter 1270 Cl- 0.100000 4.401040
1991     end LennardJonesAtomTypes
1992    
1993    
1994     begin BondTypes
1995     //Atom1 Atom2 Harmonic b0 kb (kcal/mol)
1996     CT CT Harmonic 1.526000 310.000000
1997     CT C Harmonic 1.522000 317.000000
1998     CT CA Harmonic 1.510000 317.000000
1999     CT CM Harmonic 1.510000 317.000000
2000     CT CC Harmonic 1.504000 317.000000
2001     CT C* Harmonic 1.495000 317.000000
2002     CT N Harmonic 1.449000 337.000000
2003     CT N* Harmonic 1.475000 337.000000
2004     CT N2 Harmonic 1.463000 337.000000
2005     CT N3 Harmonic 1.471000 367.000000
2006     CT OH Harmonic 1.410000 320.000000
2007     CT OS Harmonic 1.410000 320.000000
2008     CT S Harmonic 1.810000 227.000000
2009     CT SH Harmonic 1.810000 237.000000
2010     CT HC Harmonic 1.090000 340.000000
2011     CT H1 Harmonic 1.090000 340.000000
2012     CT H2 Harmonic 1.090000 340.000000
2013     CT H3 Harmonic 1.090000 340.000000
2014     CT HP Harmonic 1.090000 340.000000
2015     C CA Harmonic 1.409000 469.000000
2016     C CM Harmonic 1.444000 410.000000
2017     C CB Harmonic 1.419000 447.000000
2018     C N Harmonic 1.335000 490.000000
2019     C NA Harmonic 1.388000 418.000000
2020     C NC Harmonic 1.358000 457.000000
2021     C N* Harmonic 1.383000 424.000000
2022     C O Harmonic 1.229000 570.000000
2023     C O2 Harmonic 1.250000 656.000000
2024     CA CA Harmonic 1.400000 469.000000
2025     CA CM Harmonic 1.433000 427.000000
2026     CA CB Harmonic 1.404000 469.000000
2027     CA CN Harmonic 1.400000 469.000000
2028     CA NA Harmonic 1.381000 427.000000
2029     CA NC Harmonic 1.339000 483.000000
2030     CA N2 Harmonic 1.340000 481.000000
2031     CA OH Harmonic 1.364000 450.000000
2032     CA HA Harmonic 1.080000 367.000000
2033     CA H4 Harmonic 1.080000 367.000000
2034     CM CM Harmonic 1.350000 549.000000
2035     CM N* Harmonic 1.365000 448.000000
2036     CM HA Harmonic 1.080000 367.000000
2037     CM H4 Harmonic 1.080000 367.000000
2038     CM H5 Harmonic 1.080000 367.000000
2039     CC CV Harmonic 1.375000 512.000000
2040     CC CW Harmonic 1.371000 518.000000
2041     CC NA Harmonic 1.385000 422.000000
2042     CC NB Harmonic 1.394000 410.000000
2043     CV NB Harmonic 1.394000 410.000000
2044     CV H4 Harmonic 1.080000 367.000000
2045     CW C* Harmonic 1.352000 546.000000
2046     CW NA Harmonic 1.381000 427.000000
2047     CW H4 Harmonic 1.080000 367.000000
2048     CR NA Harmonic 1.343000 477.000000
2049     CR NB Harmonic 1.335000 488.000000
2050     CR H5 Harmonic 1.080000 367.000000
2051     CB CB Harmonic 1.370000 520.000000
2052     CB C* Harmonic 1.459000 388.000000
2053     CB CN Harmonic 1.419000 447.000000
2054     CB NB Harmonic 1.391000 414.000000
2055     CB NC Harmonic 1.354000 461.000000
2056     CB N* Harmonic 1.374000 436.000000
2057     C* HC Harmonic 1.080000 367.000000
2058     CN NA Harmonic 1.380000 428.000000
2059     CK NB Harmonic 1.304000 529.000000
2060     CK N* Harmonic 1.371000 440.000000
2061     CK H5 Harmonic 1.080000 367.000000
2062     CQ NC Harmonic 1.324000 502.000000
2063     CQ H5 Harmonic 1.080000 367.000000
2064     N H Harmonic 1.010000 434.000000
2065     NA H Harmonic 1.010000 434.000000
2066     N* H Harmonic 1.010000 434.000000
2067     N2 H Harmonic 1.010000 434.000000
2068     N3 H Harmonic 1.010000 434.000000
2069     OW HW Harmonic 0.957200 553.000000
2070     OH P Harmonic 1.610000 230.000000
2071     OH HO Harmonic 0.960000 553.000000
2072     OS P Harmonic 1.610000 230.000000
2073     OS HO Harmonic 0.960000 553.000000
2074     O2 P Harmonic 1.480000 525.000000
2075     S S Harmonic 2.038000 166.000000
2076     SH HS Harmonic 1.336000 274.000000
2077     HW HW Harmonic 1.513600 553.000000
2078 gezelter 1278 end BondTypes
2079 gezelter 1270
2080    
2081     begin BendTypes
2082     //Atom1 Atom2 Atom3 Harmonic Theta Ktheta
2083     CT CT CT Harmonic 109.500000 80.000000
2084     CT CT C Harmonic 111.100000 126.000000
2085     CT CT CA Harmonic 114.000000 126.000000
2086     CT CT CC Harmonic 113.100000 126.000000
2087     CT CT C* Harmonic 115.600000 126.000000
2088     CT CT N Harmonic 109.700000 160.000000
2089     CT CT N* Harmonic 109.500000 100.000000
2090     CT CT N2 Harmonic 111.200000 160.000000
2091     CT CT N3 Harmonic 111.200000 160.000000
2092     CT CT OH Harmonic 109.500000 100.000000
2093     CT CT OS Harmonic 109.500000 100.000000
2094     CT CT S Harmonic 114.700000 100.000000
2095     CT CT SH Harmonic 108.600000 100.000000
2096     CT CT HC Harmonic 109.500000 100.000000
2097     CT CT H1 Harmonic 109.500000 100.000000
2098     CT CT H2 Harmonic 109.500000 100.000000
2099     CT CT HP Harmonic 109.500000 100.000000
2100     C CT N Harmonic 110.100000 126.000000
2101     C CT N3 Harmonic 111.200000 160.000000
2102     C CT HC Harmonic 109.500000 100.000000
2103     C CT H1 Harmonic 109.500000 100.000000
2104     C CT HP Harmonic 109.500000 100.000000
2105     CA CT HC Harmonic 109.500000 100.000000
2106     CM CT HC Harmonic 109.500000 100.000000
2107     CC CT HC Harmonic 109.500000 100.000000
2108     C* CT HC Harmonic 109.500000 100.000000
2109     N CT H1 Harmonic 109.500000 100.000000
2110     N* CT OS Harmonic 109.500000 100.000000
2111     N* CT H1 Harmonic 109.500000 100.000000
2112     N* CT H2 Harmonic 109.500000 100.000000
2113     N2 CT H1 Harmonic 109.500000 100.000000
2114     N3 CT H1 Harmonic 109.500000 100.000000
2115     N3 CT HP Harmonic 109.500000 100.000000
2116     OH CT H1 Harmonic 109.500000 100.000000
2117     OS CT H1 Harmonic 109.500000 100.000000
2118     OS CT H2 Harmonic 109.500000 100.000000
2119     S CT H1 Harmonic 109.500000 100.000000
2120     SH CT H1 Harmonic 109.500000 100.000000
2121     HC CT HC Harmonic 109.500000 70.000000
2122     H1 CT H1 Harmonic 109.500000 70.000000
2123     H2 CT H2 Harmonic 109.500000 70.000000
2124     HP CT HP Harmonic 109.500000 70.000000
2125     CT C N Harmonic 116.600000 140.000000
2126     CT C O Harmonic 120.400000 160.000000
2127     CT C O2 Harmonic 117.000000 140.000000
2128     CA C CA Harmonic 120.000000 126.000000
2129     CM C NA Harmonic 114.100000 140.000000
2130     CM C O Harmonic 125.300000 160.000000
2131     CB C NA Harmonic 111.300000 140.000000
2132     CB C O Harmonic 128.800000 160.000000
2133     N C O Harmonic 122.900000 160.000000
2134     NA C N* Harmonic 115.400000 140.000000
2135     NA C O Harmonic 120.600000 160.000000
2136     NC C N* Harmonic 118.600000 140.000000
2137     NC C O Harmonic 122.500000 160.000000
2138     N* C O Harmonic 120.900000 160.000000
2139     O C O Harmonic 126.000000 160.000000
2140     O2 C O2 Harmonic 126.000000 160.000000
2141     CT CA CA Harmonic 120.000000 140.000000
2142     C CA CA Harmonic 120.000000 126.000000
2143     C CA HA Harmonic 120.000000 100.000000
2144     CA CA CA Harmonic 120.000000 126.000000
2145     CA CA CB Harmonic 120.000000 126.000000
2146     CA CA CN Harmonic 120.000000 126.000000
2147     CA CA OH Harmonic 120.000000 140.000000
2148     CA CA HA Harmonic 120.000000 100.000000
2149     CA CA H4 Harmonic 120.000000 100.000000
2150     CM CA NC Harmonic 121.500000 140.000000
2151     CM CA N2 Harmonic 120.100000 140.000000
2152     CB CA NC Harmonic 117.300000 140.000000
2153     CB CA N2 Harmonic 123.500000 140.000000
2154     CB CA HA Harmonic 120.000000 100.000000
2155     CB CA H4 Harmonic 120.000000 100.000000
2156     CN CA HA Harmonic 120.000000 100.000000
2157     NA CA NC Harmonic 123.300000 140.000000
2158     NA CA N2 Harmonic 116.000000 140.000000
2159     NC CA N2 Harmonic 119.300000 140.000000
2160     N2 CA N2 Harmonic 120.000000 140.000000
2161     CT CM C Harmonic 119.700000 140.000000
2162     CT CM CM Harmonic 119.700000 140.000000
2163     C CM CM Harmonic 120.700000 126.000000
2164     C CM HA Harmonic 119.700000 100.000000
2165     C CM H4 Harmonic 119.700000 100.000000
2166     CA CM CM Harmonic 117.000000 126.000000
2167     CA CM HA Harmonic 123.300000 100.000000
2168     CA CM H4 Harmonic 123.300000 100.000000
2169     CM CM N* Harmonic 121.200000 140.000000
2170     CM CM HA Harmonic 119.700000 100.000000
2171     CM CM H4 Harmonic 119.700000 100.000000
2172     N* CM H4 Harmonic 119.100000 100.000000
2173     CT CC CV Harmonic 120.000000 140.000000
2174     CT CC CW Harmonic 120.000000 140.000000
2175     CT CC NA Harmonic 120.000000 140.000000
2176     CT CC NB Harmonic 120.000000 140.000000
2177     CV CC NA Harmonic 120.000000 140.000000
2178     CW CC NA Harmonic 120.000000 140.000000
2179     CW CC NB Harmonic 120.000000 140.000000
2180     CC CV NB Harmonic 120.000000 140.000000
2181     CC CV H4 Harmonic 120.000000 100.000000
2182     NB CV H4 Harmonic 120.000000 100.000000
2183     CC CW NA Harmonic 120.000000 140.000000
2184     CC CW H4 Harmonic 120.000000 100.000000
2185     C* CW NA Harmonic 108.700000 140.000000
2186     C* CW H4 Harmonic 120.000000 100.000000
2187     NA CW H4 Harmonic 120.000000 100.000000
2188     NA CR NA Harmonic 120.000000 140.000000
2189     NA CR NB Harmonic 120.000000 140.000000
2190     NA CR H5 Harmonic 120.000000 100.000000
2191     NB CR H5 Harmonic 120.000000 100.000000
2192     C CB CB Harmonic 119.200000 126.000000
2193     C CB NB Harmonic 130.000000 140.000000
2194     CA CB CB Harmonic 117.300000 126.000000
2195     CA CB C* Harmonic 134.900000 126.000000
2196     CA CB CN Harmonic 116.200000 126.000000
2197     CA CB NB Harmonic 132.400000 140.000000
2198     CB CB NB Harmonic 110.400000 140.000000
2199     CB CB NC Harmonic 127.700000 140.000000
2200     CB CB N* Harmonic 106.200000 140.000000
2201     C* CB CN Harmonic 108.800000 126.000000
2202     NC CB N* Harmonic 126.200000 140.000000
2203     CT C* CW Harmonic 125.000000 140.000000
2204     CT C* CB Harmonic 128.600000 140.000000
2205     CW C* CB Harmonic 106.400000 126.000000
2206     CA CN CB Harmonic 122.700000 126.000000
2207     CA CN NA Harmonic 132.800000 140.000000
2208     CB CN NA Harmonic 104.400000 140.000000
2209     NB CK N* Harmonic 113.900000 140.000000
2210     NB CK H5 Harmonic 123.050000 100.000000
2211     N* CK H5 Harmonic 123.050000 100.000000
2212     NC CQ NC Harmonic 129.100000 140.000000
2213     NC CQ H5 Harmonic 115.450000 100.000000
2214     CT N CT Harmonic 118.000000 100.000000
2215     CT N C Harmonic 121.900000 100.000000
2216     CT N H Harmonic 118.040000 100.000000
2217     C N H Harmonic 120.000000 100.000000
2218     H N H Harmonic 120.000000 70.000000
2219     C NA C Harmonic 126.400000 140.000000
2220     C NA CA Harmonic 125.200000 140.000000
2221     C NA H Harmonic 116.800000 100.000000
2222     CA NA H Harmonic 118.000000 100.000000
2223     CC NA CR Harmonic 120.000000 140.000000
2224     CC NA H Harmonic 120.000000 100.000000
2225     CW NA CR Harmonic 120.000000 140.000000
2226     CW NA CN Harmonic 111.600000 140.000000
2227     CW NA H Harmonic 120.000000 100.000000
2228     CR NA H Harmonic 120.000000 100.000000
2229     CN NA H Harmonic 123.100000 100.000000
2230     CC NB CR Harmonic 117.000000 140.000000
2231     CV NB CR Harmonic 117.000000 140.000000
2232     CB NB CK Harmonic 103.800000 140.000000
2233     C NC CA Harmonic 120.500000 140.000000
2234     CA NC CB Harmonic 112.200000 140.000000
2235     CA NC CQ Harmonic 118.600000 140.000000
2236     CB NC CQ Harmonic 111.000000 140.000000
2237     CT N* C Harmonic 117.600000 140.000000
2238     CT N* CM Harmonic 121.200000 140.000000
2239     CT N* CB Harmonic 125.800000 140.000000
2240     CT N* CK Harmonic 128.800000 140.000000
2241     C N* CM Harmonic 121.600000 140.000000
2242     C N* H Harmonic 119.200000 100.000000
2243     CM N* H Harmonic 121.200000 100.000000
2244     CB N* CK Harmonic 105.400000 140.000000
2245     CB N* H Harmonic 125.800000 100.000000
2246     CK N* H Harmonic 128.800000 100.000000
2247     CT N2 CA Harmonic 123.200000 100.000000
2248     CT N2 H Harmonic 118.400000 100.000000
2249     CA N2 H Harmonic 120.000000 100.000000
2250     H N2 H Harmonic 120.000000 70.000000
2251     CT N3 CT Harmonic 109.500000 100.000000
2252     CT N3 H Harmonic 109.500000 100.000000
2253     H N3 H Harmonic 109.500000 70.000000
2254     HW OW HW Harmonic 104.520000 200.000000
2255     CT OH HO Harmonic 108.500000 110.000000
2256     CA OH HO Harmonic 113.000000 100.000000
2257     P OH HO Harmonic 108.500000 90.000000
2258     CT OS CT Harmonic 109.500000 120.000000
2259     CT OS P Harmonic 120.500000 200.000000
2260     P OS P Harmonic 120.500000 200.000000
2261     CT S CT Harmonic 98.900000 124.000000
2262     CT S S Harmonic 103.700000 136.000000
2263     CT SH HS Harmonic 96.000000 86.000000
2264     HS SH HS Harmonic 92.070000 70.000000
2265     OH P OS Harmonic 102.600000 90.000000
2266     OH P O2 Harmonic 108.230000 90.000000
2267     OS P OS Harmonic 102.600000 90.000000
2268     OS P O2 Harmonic 108.230000 200.000000
2269     O2 P O2 Harmonic 119.900000 280.000000
2270     OW HW HW Harmonic 127.740000 0.000000
2271 gezelter 1414 C OH HO Harmonic 113.00 50.00000
2272 gezelter 1270 end BendTypes
2273    
2274    
2275     begin TorsionTypes
2276     //Atom1 Atom2 Atom3 Atom4 Charmm Kchi n delta [Kchi n delta]
2277     CT CT CT CT Charmm 0.200000 1 180.000000 0.25 2 180 0.18 3 0
2278     CT CT CT C Charmm 0.156000 3 0.000000
2279     CT CT CT N Charmm 0.156000 3 0.000000
2280     CT CT CT N* Charmm 0.156000 3 0.000000
2281     CT CT CT N2 Charmm 0.156000 3 0.000000
2282     CT CT CT N3 Charmm 0.156000 3 0.000000
2283     CT CT CT OH Charmm 0.156000 3 0.000000
2284     CT CT CT OS Charmm 0.156000 3 0.000000
2285     CT CT CT S Charmm 0.156000 3 0.000000
2286     CT CT CT HC Charmm 0.160000 3 0.000000
2287     CT CT CT H1 Charmm 0.156000 3 0.000000
2288     CT CT CT H2 Charmm 0.156000 3 0.000000
2289     CT CT CT HP Charmm 0.156000 3 0.000000
2290     C CT CT C Charmm 0.156000 3 0.000000
2291     C CT CT CA Charmm 0.156000 3 0.000000
2292     C CT CT CC Charmm 0.156000 3 0.000000
2293     C CT CT C* Charmm 0.156000 3 0.000000
2294     C CT CT N Charmm 0.156000 3 0.000000
2295     C CT CT N3 Charmm 0.156000 3 0.000000
2296     C CT CT OH Charmm 0.156000 3 0.000000
2297     C CT CT S Charmm 0.156000 3 0.000000
2298     C CT CT SH Charmm 0.156000 3 0.000000
2299     C CT CT HC Charmm 0.156000 3 0.000000
2300     C CT CT H1 Charmm 0.156000 3 0.000000
2301     C CT CT HP Charmm 0.156000 3 0.000000
2302     CA CT CT N Charmm 0.156000 3 0.000000
2303     CA CT CT N3 Charmm 0.156000 3 0.000000
2304     CA CT CT H1 Charmm 0.156000 3 0.000000
2305     CA CT CT HP Charmm 0.156000 3 0.000000
2306     CC CT CT N Charmm 0.156000 3 0.000000
2307     CC CT CT N3 Charmm 0.156000 3 0.000000
2308     CC CT CT H1 Charmm 0.156000 3 0.000000
2309     CC CT CT HP Charmm 0.156000 3 0.000000
2310     C* CT CT N Charmm 0.156000 3 0.000000
2311     C* CT CT N3 Charmm 0.156000 3 0.000000
2312     C* CT CT H1 Charmm 0.156000 3 0.000000
2313     C* CT CT HP Charmm 0.156000 3 0.000000
2314     N CT CT OH Charmm 0.156000 3 0.000000
2315     N CT CT S Charmm 0.156000 3 0.000000
2316     N CT CT SH Charmm 0.156000 3 0.000000
2317     N CT CT HC Charmm 0.156000 3 0.000000
2318     N CT CT H1 Charmm 0.156000 3 0.000000
2319     N* CT CT OH Charmm 0.156000 3 0.000000
2320     N* CT CT HC Charmm 0.156000 3 0.000000
2321     N* CT CT H1 Charmm 0.156000 3 0.000000
2322     N2 CT CT HC Charmm 0.156000 3 0.000000
2323     N3 CT CT OH Charmm 0.156000 3 0.000000
2324     N3 CT CT S Charmm 0.156000 3 0.000000
2325     N3 CT CT SH Charmm 0.156000 3 0.000000
2326     N3 CT CT HC Charmm 0.156000 3 0.000000
2327     N3 CT CT H1 Charmm 0.156000 3 0.000000
2328     OH CT CT N* Charmm 0.156000 3 0.000000
2329     OH CT CT OH Charmm 0.144000 3 0.000000 1.175 2 0
2330     OH CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2331     OH CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2332     OH CT CT H1 Charmm 0.156000 3 0.000000
2333     OH CT CT H2 Charmm 0.156000 3 0.000000
2334     OH CT CT HP Charmm 0.156000 3 0.000000
2335     OS CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2336     OS CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2337     OS CT CT H1 Charmm 0.156000 3 0.000000
2338     S CT CT HC Charmm 0.156000 3 0.000000
2339     S CT CT H1 Charmm 0.156000 3 0.000000
2340     S CT CT HP Charmm 0.156000 3 0.000000
2341     SH CT CT H1 Charmm 0.156000 3 0.000000
2342     SH CT CT HP Charmm 0.156000 3 0.000000
2343     HC CT CT HC Charmm 0.150000 3 0.000000
2344     HC CT CT H1 Charmm 0.156000 3 0.000000
2345     HC CT CT H2 Charmm 0.156000 3 0.000000
2346     HC CT CT HP Charmm 0.156000 3 0.000000
2347     H1 CT CT H1 Charmm 0.156000 3 0.000000
2348     H1 CT CT H2 Charmm 0.156000 3 0.000000
2349     H1 CT CT HP Charmm 0.156000 3 0.000000
2350     CT CT C N Charmm 0.070000 2 0.000000 0.1 4 0
2351     CT CT C O Charmm 0.000000 2 0.000000
2352     CT CT C O2 Charmm 0.000000 2 0.000000
2353     N CT C N Charmm 1.700000 1 180.000000 2.0 2 180
2354     N CT C O Charmm 0.000000 2 0.000000
2355     N CT C O2 Charmm 0.000000 2 0.000000
2356     N3 CT C N Charmm 0.000000 2 0.000000
2357     N3 CT C O Charmm 0.000000 2 0.000000
2358     N3 CT C O2 Charmm 0.000000 2 0.000000
2359     HC CT C N Charmm 0.000000 2 0.000000
2360     HC CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2361     HC CT C O2 Charmm 0.000000 2 0.000000
2362     H1 CT C N Charmm 0.000000 2 0.000000
2363     H1 CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2364     H1 CT C O2 Charmm 0.000000 2 0.000000
2365     CT CT CA CA Charmm 0.000000 2 0.000000
2366     HC CT CA CA Charmm 0.000000 2 0.000000
2367     HC CT CM C Charmm 0.000000 3 0.000000
2368     HC CT CM CM Charmm 1.150000 1 0.000000 0.38 3 180
2369     CT CT CC CV Charmm 0.000000 2 0.000000
2370     CT CT CC CW Charmm 0.000000 2 0.000000
2371     CT CT CC NA Charmm 0.000000 2 0.000000
2372     CT CT CC NB Charmm 0.000000 2 0.000000
2373     HC CT CC CV Charmm 0.000000 2 0.000000
2374     HC CT CC CW Charmm 0.000000 2 0.000000
2375     HC CT CC NA Charmm 0.000000 2 0.000000
2376     HC CT CC NB Charmm 0.000000 2 0.000000
2377     CT CT C* CW Charmm 0.000000 2 0.000000
2378     CT CT C* CB Charmm 0.000000 2 0.000000
2379     HC CT C* CW Charmm 0.000000 2 0.000000
2380     HC CT C* CB Charmm 0.000000 2 0.000000
2381     CT CT N CT Charmm 0.000000 2 0.000000
2382     CT CT N C Charmm 0.530000 1 0.000000 0.15 3 180 0.5 4 180
2383     CT CT N H Charmm 0.000000 2 0.000000
2384     C CT N CT Charmm 0.000000 2 0.000000
2385     C CT N C Charmm 0.800000 1 0.000000 0.85 2 180
2386     C CT N H Charmm 0.000000 2 0.000000
2387     H1 CT N CT Charmm 0.000000 2 0.000000
2388     H1 CT N C Charmm 0.000000 2 0.000000
2389     H1 CT N H Charmm 0.000000 2 0.000000
2390     CT CT N* C Charmm 0.000000 2 0.000000
2391     CT CT N* CM Charmm 0.000000 2 0.000000
2392     CT CT N* CB Charmm 0.000000 2 0.000000
2393     CT CT N* CK Charmm 0.000000 2 0.000000
2394     OS CT N* C Charmm 0.000000 2 0.000000
2395     OS CT N* CM Charmm 0.000000 2 180.000000 2.5 1 0
2396     OS CT N* CB Charmm 0.000000 2 0.000000
2397     OS CT N* CK Charmm 0.000000 2 180.000000 2.5 1 0
2398     H2 CT N* C Charmm 0.000000 2 0.000000
2399     H2 CT N* CM Charmm 0.000000 2 0.000000
2400     H2 CT N* CB Charmm 0.000000 2 0.000000
2401     H2 CT N* CK Charmm 0.000000 2 0.000000
2402     CT CT N2 CA Charmm 0.000000 3 0.000000
2403     CT CT N2 H Charmm 0.000000 3 0.000000
2404     H1 CT N2 CA Charmm 0.000000 3 0.000000
2405     H1 CT N2 H Charmm 0.000000 3 0.000000
2406     CT CT N3 CT Charmm 0.156000 3 0.000000
2407     CT CT N3 H Charmm 0.156000 3 0.000000
2408     C CT N3 CT Charmm 0.156000 3 0.000000
2409     C CT N3 H Charmm 0.156000 3 0.000000
2410     H1 CT N3 CT Charmm 0.156000 3 0.000000
2411     H1 CT N3 H Charmm 0.156000 3 0.000000
2412     HP CT N3 CT Charmm 0.156000 3 0.000000
2413     HP CT N3 H Charmm 0.156000 3 0.000000
2414     CT CT OH HO Charmm 0.025000 1 0.000000 0.16 3 0
2415     H1 CT OH HO Charmm 0.167000 3 0.000000
2416     CT CT OS CT Charmm 0.383000 3 0.000000 0.1 2 180
2417     CT CT OS C Charmm 0.383000 3 0.000000 0.8 1 180
2418     CT CT OS P Charmm 0.383000 3 0.000000
2419     N* CT OS CT Charmm 0.383000 3 0.000000 0.65 2 0
2420     OS CT OS CT Charmm 1.350000 1 180.000000 0.85 3 180 0.1 3 0
2421     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2422     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2423     H1 CT OS CT Charmm 0.383000 3 0.000000
2424     H1 CT OS P Charmm 0.383000 3 0.000000
2425     H2 CT OS CT Charmm 0.383000 3 0.000000
2426     CT CT S CT Charmm 0.333000 3 0.000000
2427     CT CT S S Charmm 0.333000 3 0.000000
2428     H1 CT S CT Charmm 0.333000 3 0.000000
2429     H1 CT S S Charmm 0.333000 3 0.000000
2430     CT CT SH HS Charmm 0.250000 3 0.000000
2431     H1 CT SH HS Charmm 0.250000 3 0.000000
2432     NA C CM CT Charmm 2.175000 2 180.000000
2433     NA C CM CM Charmm 2.175000 2 180.000000
2434     NA C CM HA Charmm 2.175000 2 180.000000
2435     O C CM CT Charmm 2.175000 2 180.000000
2436     O C CM CM Charmm 2.175000 2 180.000000 0.3 3 0
2437     O C CM HA Charmm 2.175000 2 180.000000
2438     NA C CB CB Charmm 3.000000 2 180.000000
2439     NA C CB NB Charmm 3.000000 2 180.000000
2440     O C CB CB Charmm 3.000000 2 180.000000
2441     O C CB NB Charmm 3.000000 2 180.000000
2442     CT C N CT Charmm 2.500000 2 180.000000
2443     CT C N H Charmm 2.500000 2 180.000000
2444     O C N CT Charmm 2.500000 2 180.000000
2445     O C N H Charmm 2.000000 1 0.000000 2.5 2 180
2446     CM C NA C Charmm 1.350000 2 180.000000
2447     CM C NA H Charmm 1.350000 2 180.000000
2448     CB C NA CA Charmm 1.350000 2 180.000000
2449     CB C NA H Charmm 1.350000 2 180.000000
2450     N* C NA C Charmm 1.350000 2 180.000000
2451     N* C NA H Charmm 1.350000 2 180.000000
2452     O C NA C Charmm 1.350000 2 180.000000
2453     O C NA CA Charmm 1.350000 2 180.000000
2454     O C NA H Charmm 1.350000 2 180.000000
2455     N* C NC CA Charmm 4.000000 2 180.000000
2456     O C NC CA Charmm 4.000000 2 180.000000
2457     NA C N* CT Charmm 1.450000 2 180.000000
2458     NA C N* CM Charmm 1.450000 2 180.000000
2459     NC C N* CT Charmm 1.450000 2 180.000000
2460     NC C N* CM Charmm 1.450000 2 180.000000
2461     O C N* CT Charmm 1.450000 2 180.000000
2462     O C N* CM Charmm 1.450000 2 180.000000
2463     O C OH HO Charmm 1.900000 1 0.000000 2.3 2 180
2464     O C OS CT Charmm 1.400000 1 180.000000 2.7 2 180
2465     CT CA CA CA Charmm 3.625000 2 180.000000
2466     CT CA CA HA Charmm 3.625000 2 180.000000
2467     CA CA CA CA Charmm 3.625000 2 180.000000
2468     CA CA CA CB Charmm 3.625000 2 180.000000
2469     CA CA CA CN Charmm 3.625000 2 180.000000
2470     CA CA CA OH Charmm 3.625000 2 180.000000
2471     CA CA CA HA Charmm 3.625000 2 180.000000
2472     CB CA CA HA Charmm 3.625000 2 180.000000
2473     CN CA CA HA Charmm 3.625000 2 180.000000
2474     OH CA CA HA Charmm 3.625000 2 180.000000
2475     HA CA CA HA Charmm 3.625000 2 180.000000
2476     NC CA CM CM Charmm 2.550000 2 180.000000
2477     NC CA CM HA Charmm 2.550000 2 180.000000
2478     N2 CA CM CM Charmm 2.550000 2 180.000000
2479     N2 CA CM HA Charmm 2.550000 2 180.000000
2480     CA CA CB C* Charmm 3.500000 2 180.000000
2481     CA CA CB CN Charmm 3.500000 2 180.000000
2482     NC CA CB CB Charmm 3.500000 2 180.000000
2483     NC CA CB NB Charmm 3.500000 2 180.000000
2484     N2 CA CB CB Charmm 3.500000 2 180.000000
2485     N2 CA CB NB Charmm 3.500000 2 180.000000
2486     HA CA CB C* Charmm 3.500000 2 180.000000
2487     HA CA CB CN Charmm 3.500000 2 180.000000
2488     CA CA CN CB Charmm 3.625000 2 180.000000
2489     CA CA CN NA Charmm 3.625000 2 180.000000
2490     HA CA CN CB Charmm 3.625000 2 180.000000
2491     HA CA CN NA Charmm 3.625000 2 180.000000
2492     NC CA NA C Charmm 1.500000 2 180.000000
2493     NC CA NA H Charmm 1.500000 2 180.000000
2494     N2 CA NA C Charmm 1.500000 2 180.000000
2495     N2 CA NA H Charmm 1.500000 2 180.000000
2496     CM CA NC C Charmm 4.800000 2 180.000000
2497     CB CA NC CQ Charmm 4.800000 2 180.000000
2498     NA CA NC CB Charmm 4.800000 2 180.000000
2499     N2 CA NC C Charmm 4.800000 2 180.000000
2500     N2 CA NC CB Charmm 4.800000 2 180.000000
2501     N2 CA NC CQ Charmm 4.800000 2 180.000000
2502     CM CA N2 H Charmm 2.400000 2 180.000000
2503     CB CA N2 H Charmm 2.400000 2 180.000000
2504     NA CA N2 H Charmm 2.400000 2 180.000000
2505     NC CA N2 H Charmm 2.400000 2 180.000000
2506     N2 CA N2 CT Charmm 2.400000 2 180.000000
2507     N2 CA N2 H Charmm 2.400000 2 180.000000
2508     CA CA OH HO Charmm 0.900000 2 180.000000
2509     CT CM CM CT Charmm 1.900000 1 180.000000 6.65 2 180
2510     CT CM CM N* Charmm 6.650000 2 180.000000
2511     CT CM CM H4 Charmm 6.650000 2 180.000000
2512     C CM CM N* Charmm 6.650000 2 180.000000
2513     C CM CM H4 Charmm 6.650000 2 180.000000
2514     CA CM CM N* Charmm 6.650000 2 180.000000
2515     CA CM CM H4 Charmm 6.650000 2 180.000000
2516     HA CM CM N* Charmm 6.650000 2 180.000000
2517     HA CM CM H4 Charmm 6.650000 2 180.000000
2518     CM CM N* CT Charmm 1.850000 2 180.000000
2519     CM CM N* C Charmm 1.850000 2 180.000000
2520     H4 CM N* CT Charmm 1.850000 2 180.000000
2521     H4 CM N* C Charmm 1.850000 2 180.000000
2522     CT CC CV NB Charmm 5.150000 2 180.000000
2523     CT CC CV H4 Charmm 5.150000 2 180.000000
2524     NA CC CV NB Charmm 5.150000 2 180.000000
2525     NA CC CV H4 Charmm 5.150000 2 180.000000
2526     CT CC CW NA Charmm 5.375000 2 180.000000
2527     CT CC CW H4 Charmm 5.375000 2 180.000000
2528     NA CC CW NA Charmm 5.375000 2 180.000000
2529     NA CC CW H4 Charmm 5.375000 2 180.000000
2530     NB CC CW NA Charmm 5.375000 2 180.000000
2531     NB CC CW H4 Charmm 5.375000 2 180.000000
2532     CT CC NA CR Charmm 1.400000 2 180.000000
2533     CT CC NA H Charmm 1.400000 2 180.000000
2534     CV CC NA CR Charmm 1.400000 2 180.000000
2535     CV CC NA H Charmm 1.400000 2 180.000000
2536     CW CC NA CR Charmm 1.400000 2 180.000000
2537     CW CC NA H Charmm 1.400000 2 180.000000
2538     CT CC NB CR Charmm 2.400000 2 180.000000
2539     CW CC NB CR Charmm 2.400000 2 180.000000
2540     CC CV NB CR Charmm 2.400000 2 180.000000
2541     H4 CV NB CR Charmm 2.400000 2 180.000000
2542     NA CW C* CT Charmm 6.525000 2 180.000000
2543     NA CW C* CB Charmm 6.525000 2 180.000000
2544     H4 CW C* CT Charmm 6.525000 2 180.000000
2545     H4 CW C* CB Charmm 6.525000 2 180.000000
2546     CC CW NA CR Charmm 1.500000 2 180.000000
2547     CC CW NA H Charmm 1.500000 2 180.000000
2548     C* CW NA CN Charmm 1.500000 2 180.000000
2549     C* CW NA H Charmm 1.500000 2 180.000000
2550     H4 CW NA CR Charmm 1.500000 2 180.000000
2551     H4 CW NA CN Charmm 1.500000 2 180.000000
2552     H4 CW NA H Charmm 1.500000 2 180.000000
2553     NA CR NA CC Charmm 2.325000 2 180.000000
2554     NA CR NA CW Charmm 2.325000 2 180.000000
2555     NA CR NA H Charmm 2.325000 2 180.000000
2556     NB CR NA CC Charmm 2.325000 2 180.000000
2557     NB CR NA CW Charmm 2.325000 2 180.000000
2558     NB CR NA H Charmm 2.325000 2 180.000000
2559     H5 CR NA CC Charmm 2.325000 2 180.000000
2560     H5 CR NA CW Charmm 2.325000 2 180.000000
2561     H5 CR NA H Charmm 2.325000 2 180.000000
2562     NA CR NB CC Charmm 5.000000 2 180.000000
2563     NA CR NB CV Charmm 5.000000 2 180.000000
2564     H5 CR NB CC Charmm 5.000000 2 180.000000
2565     H5 CR NB CV Charmm 5.000000 2 180.000000
2566     C CB CB NC Charmm 5.450000 2 180.000000
2567     C CB CB N* Charmm 5.450000 2 180.000000
2568     CA CB CB NC Charmm 5.450000 2 180.000000
2569     CA CB CB N* Charmm 5.450000 2 180.000000
2570     NB CB CB NC Charmm 5.450000 2 180.000000
2571     NB CB CB N* Charmm 5.450000 2 180.000000
2572     CA CB C* CT Charmm 1.675000 2 180.000000
2573     CA CB C* CW Charmm 1.675000 2 180.000000
2574     CN CB C* CT Charmm 1.675000 2 180.000000
2575     CN CB C* CW Charmm 1.675000 2 180.000000
2576     CA CB CN CA Charmm 3.000000 2 180.000000
2577     CA CB CN NA Charmm 3.000000 2 180.000000
2578     C* CB CN CA Charmm 3.000000 2 180.000000
2579     C* CB CN NA Charmm 3.000000 2 180.000000
2580     C CB NB CK Charmm 2.550000 2 180.000000
2581     CA CB NB CK Charmm 2.550000 2 180.000000
2582     CB CB NB CK Charmm 2.550000 2 180.000000
2583     CB CB NC CA Charmm 4.150000 2 180.000000
2584     CB CB NC CQ Charmm 4.150000 2 180.000000
2585     N* CB NC CA Charmm 4.150000 2 180.000000
2586     N* CB NC CQ Charmm 4.150000 2 180.000000
2587     CB CB N* CT Charmm 1.650000 2 180.000000
2588     CB CB N* CK Charmm 1.650000 2 180.000000
2589     NC CB N* CT Charmm 1.650000 2 180.000000
2590     NC CB N* CK Charmm 1.650000 2 180.000000
2591     CA CN NA CW Charmm 1.525000 2 180.000000
2592     CA CN NA H Charmm 1.525000 2 180.000000
2593     CB CN NA CW Charmm 1.525000 2 180.000000
2594     CB CN NA H Charmm 1.525000 2 180.000000
2595     N* CK NB CB Charmm 10.000000 2 180.000000
2596     H5 CK NB CB Charmm 10.000000 2 180.000000
2597     NB CK N* CT Charmm 1.700000 2 180.000000
2598     NB CK N* CB Charmm 1.700000 2 180.000000
2599     H5 CK N* CT Charmm 1.700000 2 180.000000
2600     H5 CK N* CB Charmm 1.700000 2 180.000000
2601     NC CQ NC CA Charmm 6.800000 2 180.000000
2602     NC CQ NC CB Charmm 6.800000 2 180.000000
2603     H5 CQ NC CA Charmm 6.800000 2 180.000000
2604     H5 CQ NC CB Charmm 6.800000 2 180.000000
2605     HO OH P OS Charmm 0.250000 3 0.000000
2606     HO OH P O2 Charmm 0.250000 3 0.000000
2607     CT OS P OH Charmm 0.250000 3 0.000000 1.2 2 0
2608     CT OS P OS Charmm 0.250000 3 0.000000 1.2 2 0
2609     CT OS P O2 Charmm 0.250000 3 0.000000
2610     CT S S CT Charmm 3.500000 2 0.000000 0.6 3 0
2611 gezelter 1414 CT C OH HO Charmm 2.30000000 2 180.0
2612 gezelter 1270 end TorsionTypes
2613    
2614    
2615 gezelter 1278 begin InversionTypes
2616 cli2 1289 C CT N O AmberImproper 10.500000
2617     C CM NA O AmberImproper 10.500000
2618     C CB NA O AmberImproper 10.500000
2619     C N* NA O AmberImproper 10.500000
2620     C CT O2 O2 AmberImproper 10.500000
2621     CA CA CA CT AmberImproper 1.100000
2622     CA CA CA OH AmberImproper 1.100000
2623     CA CA CA HA AmberImproper 1.100000
2624     CA CN CA HA AmberImproper 1.100000
2625     CA NC CM N2 AmberImproper 1.100000
2626     CA CA CB HA AmberImproper 1.100000
2627     CA CB NC N2 AmberImproper 1.100000
2628     CA NA NC N2 AmberImproper 1.100000
2629     CA N2 N2 N2 AmberImproper 10.500000
2630     CM CM CA HA AmberImproper 1.100000
2631     CM C CM CT AmberImproper 1.100000
2632     CM C CM HA AmberImproper 1.100000
2633     CM N* CM H4 AmberImproper 1.100000
2634     CC NA CV CT AmberImproper 1.100000
2635     CC NA CW CT AmberImproper 1.100000
2636     CC NB CW CT AmberImproper 1.100000
2637     CV CC NB H4 AmberImproper 1.100000
2638     CW CC NA H4 AmberImproper 1.100000
2639     CW C* NA H4 AmberImproper 1.100000
2640     CR NA NA H5 AmberImproper 1.100000
2641     CR NB NA H5 AmberImproper 1.100000
2642     CR NA NB H5 AmberImproper 1.100000
2643     C* CW CB CT AmberImproper 1.100000
2644     CK NB N* H5 AmberImproper 1.100000
2645     CQ NC NC H5 AmberImproper 1.100000
2646     N C CT CT AmberImproper 1.000000
2647     N C CT H AmberImproper 1.000000
2648     N C H H AmberImproper 1.000000
2649     NA C C H AmberImproper 1.000000
2650     NA C CA H AmberImproper 1.000000
2651     NA CR CW H AmberImproper 1.000000
2652     NA CC CR H AmberImproper 1.000000
2653     NA CW CN H AmberImproper 1.000000
2654     N* CM C CT AmberImproper 1.000000
2655     N* CK CB CT AmberImproper 1.000000
2656     N2 CT CA H AmberImproper 1.000000
2657     N2 CA H H AmberImproper 1.000000
2658 gezelter 1414 C CT OH O2 AmberImproper 10.5
2659 gezelter 1278 end InversionTypes
2660 gezelter 1270