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root/OpenMD/branches/development/src/utils/LocalIndexManager.hpp

Comparing:
trunk/src/utils/LocalIndexManager.hpp (file contents), Revision 507 by gezelter, Fri Apr 15 22:04:00 2005 UTC vs.
branches/development/src/utils/LocalIndexManager.hpp (file contents), Revision 1540 by gezelter, Mon Jan 17 21:34:36 2011 UTC

#	Line 6 | Line 6
6		* redistribute this software in source and binary code form, provided
7		* that the following conditions are met:
8		*
9	<	* 1. Acknowledgement of the program authors must be made in any
10	<	*    publication of scientific results based in part on use of the
11	<	*    program.  An acceptable form of acknowledgement is citation of
12	<	*    the article in which the program was described (Matthew
13	<	*    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14	<	*    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15	<	*    Parallel Simulation Engine for Molecular Dynamics,"
16	<	*    J. Comput. Chem. 26, pp. 252-271 (2005))
17	<	*
18	<	* 2. Redistributions of source code must retain the above copyright
9	>	* 1. Redistributions of source code must retain the above copyright
10		*    notice, this list of conditions and the following disclaimer.
11		*
12	<	* 3. Redistributions in binary form must reproduce the above copyright
12	>	* 2. Redistributions in binary form must reproduce the above copyright
13		*    notice, this list of conditions and the following disclaimer in the
14		*    documentation and/or other materials provided with the
15		*    distribution.
#	Line 37 | Line 28
28		* arising out of the use of or inability to use software, even if the
29		* University of Notre Dame has been advised of the possibility of
30		* such damages.
31	+	*
32	+	* SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33	+	* research, please cite the appropriate papers when you publish your
34	+	* work.  Good starting points are:
35	+	*
36	+	* [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
37	+	* [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
38	+	* [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).
39	+	* [4]  Vardeman & Gezelter, in progress (2009).
40		*/
41
42		/**
#	Line 54 | Line 54
54		#include <list>
55		#include <utility>
56
57	<	namespace oopse {
57	>	namespace OpenMD {
58
59		/**
60		* @class IndexListContainer
#	Line 294 | Line 294 | namespace oopse {
294		void releaseRigidBodyIndex(std::vector<int> indices) {
295		rigidBodyIndexContainer_.insert(indices);
296		}
297	+
298	+	int getNextCutoffGroupIndex() {
299	+	return cutoffGroupIndexContainer_.pop();
300	+	}
301	+
302	+	std::vector<int> getCutoffGroupIndicesBefore(int index) {
303	+	return cutoffGroupIndexContainer_.getIndicesBefore(index);
304	+	}
305	+
306	+	void releaseCutoffGroupIndex(int index) {
307	+	cutoffGroupIndexContainer_.insert(index);
308	+	}
309	+
310	+	void releaseCutoffGroupIndex(int beginIndex, int endIndex) {
311	+	cutoffGroupIndexContainer_.insert(beginIndex, endIndex);
312	+	}
313	+
314	+	void releaseCutoffGroupIndex(std::vector<int> indices) {
315	+	cutoffGroupIndexContainer_.insert(indices);
316	+	}
317
318		private:
319
320		IndexListContainer atomIndexContainer_;
321		IndexListContainer rigidBodyIndexContainer_;
322	+	IndexListContainer cutoffGroupIndexContainer_;
323		};
324
325	<	} //end namespace oopse
325	>	} //end namespace OpenMD
326		#endif //UTILS_LOCALINDEXMANAGER_HPP

Comparing:
trunk/src/utils/LocalIndexManager.hpp (property svn:keywords), Revision 507 by gezelter, Fri Apr 15 22:04:00 2005 UTC vs.
branches/development/src/utils/LocalIndexManager.hpp (property svn:keywords), Revision 1540 by gezelter, Mon Jan 17 21:34:36 2011 UTC

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