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root/OpenMD/branches/development/src/selection/SelectionManager.hpp

Comparing:
trunk/src/selection/SelectionManager.hpp (file contents), Revision 315 by tim, Fri Feb 11 22:39:03 2005 UTC vs.
branches/development/src/selection/SelectionManager.hpp (file contents), Revision 1465 by chuckv, Fri Jul 9 23:08:25 2010 UTC

#	Line 6 | Line 6
6		* redistribute this software in source and binary code form, provided
7		* that the following conditions are met:
8		*
9	<	* 1. Acknowledgement of the program authors must be made in any
10	<	*    publication of scientific results based in part on use of the
11	<	*    program.  An acceptable form of acknowledgement is citation of
12	<	*    the article in which the program was described (Matthew
13	<	*    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14	<	*    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15	<	*    Parallel Simulation Engine for Molecular Dynamics,"
16	<	*    J. Comput. Chem. 26, pp. 252-271 (2005))
17	<	*
18	<	* 2. Redistributions of source code must retain the above copyright
9	>	* 1. Redistributions of source code must retain the above copyright
10		*    notice, this list of conditions and the following disclaimer.
11		*
12	<	* 3. Redistributions in binary form must reproduce the above copyright
12	>	* 2. Redistributions in binary form must reproduce the above copyright
13		*    notice, this list of conditions and the following disclaimer in the
14		*    documentation and/or other materials provided with the
15		*    distribution.
#	Line 37 | Line 28
28		* arising out of the use of or inability to use software, even if the
29		* University of Notre Dame has been advised of the possibility of
30		* such damages.
31	+	*
32	+	* SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33	+	* research, please cite the appropriate papers when you publish your
34	+	* work.  Good starting points are:
35	+	*
36	+	* [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
37	+	* [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
38	+	* [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).
39	+	* [4]  Vardeman & Gezelter, in progress (2009).
40		*/
41
42		#ifndef SELECTION_SELECTIONMANAGER_HPP
43		#define SELECTION_SELECTIONMANAGER_HPP
44
45	<	#include "utils/BitSet.hpp"
45	>	#include "utils/OpenMDBitSet.hpp"
46		#include "primitives/StuntDouble.hpp"
47	<	namespace oopse {
47	>	namespace OpenMD {
48
49	<	class SimInfo;
50	<	/**
51	<	* @class SelectionManager SelectionManager.hpp "selection/SelectionManager.hpp"
52	<	* @brief
53	<	*/
54	<	class SelectionManager {
55	<	public:
56	<	SelectionManager(SimInfo* info);
49	>	class SimInfo;
50	>	/**
51	>	* @class SelectionManager SelectionManager.hpp "selection/SelectionManager.hpp"
52	>	* @brief
53	>	*/
54	>	class SelectionManager {
55	>	public:
56	>	SelectionManager(SimInfo* info);
57
58	<	void addSelection(StuntDouble* sd) {
59	<	bsSelection_.setBitOn(sd->getGlobalIndex());
60	<	}
58	>	void addSelection(StuntDouble* sd) {
59	>	bsSelection_.setBitOn(sd->getGlobalIndex());
60	>	}
61
62	<	void addSelectionSet(const BitSet& bs) {
63	<	bsSelection_ |= bs;
64	<	}
62	>	void addSelectionSet(const OpenMDBitSet& bs) {
63	>	bsSelection_ |= bs;
64	>	}
65
66	<	void setSelection(StuntDouble* sd) {
67	<	bsSelection_.clearAll();
68	<	bsSelection_.setBitOn(sd->getGlobalIndex());
69	<	}
66	>	void setSelection(StuntDouble* sd) {
67	>	bsSelection_.clearAll();
68	>	bsSelection_.setBitOn(sd->getGlobalIndex());
69	>	}
70
71	<	void setSelectionSet(const BitSet& bs) {
72	<	bsSelection_ = bs;
73	<	}
71	>	void setSelectionSet(const OpenMDBitSet& bs) {
72	>	bsSelection_ = bs;
73	>	}
74
75	<	void toggleSelection(StuntDouble* sd) {
76	<	bsSelection_.flip(sd->getGlobalIndex());
77	<	}
75	>	void toggleSelection(StuntDouble* sd) {
76	>	bsSelection_.flip(sd->getGlobalIndex());
77	>	}
78
79	<	void toggleSelection() {
80	<	bsSelection_.flip();
81	<	}
79	>	void toggleSelection() {
80	>	bsSelection_.flip();
81	>	}
82
83	<	void selectAll() {
84	<	bsSelection_.setAll();
85	<	}
83	>	void selectAll() {
84	>	bsSelection_.setAll();
85	>	}
86
87	<	void clearSelection() {
88	<	bsSelection_.clearAll();
89	<	}
87	>	void clearSelection() {
88	>	bsSelection_.clearAll();
89	>	}
90
91	<	void clearSelection(StuntDouble* sd) {
92	<	bsSelection_.setBitOff(sd->getGlobalIndex());
93	<	}
91	>	void clearSelection(StuntDouble* sd) {
92	>	bsSelection_.setBitOff(sd->getGlobalIndex());
93	>	}
94
95	<	bool isSelected(StuntDouble* sd) {
96	<	return bsSelection_[sd->getGlobalIndex()];
97	<	}
95	>	bool isSelected(StuntDouble* sd) {
96	>	return bsSelection_[sd->getGlobalIndex()];
97	>	}
98
99	<	bool isEmpty() {
100	<	return bsSelection_.none();
101	<	}
99	>	bool isEmpty() {
100	>	return bsSelection_.none();
101	>	}
102
103	<	int getSelectionCount() {
104	<	return bsSelection_.countBits();
105	<	}
103	>	int getSelectionCount() {
104	>	return bsSelection_.countBits();
105	>	}
106
107	<	BitSet getSelectionSet() {
108	<	return bsSelection_;
109	<	}
107	>	OpenMDBitSet getSelectionSet() {
108	>	return bsSelection_;
109	>	}
110
111
112	<	StuntDouble* beginSelected(int& i);
113	<	StuntDouble* nextSelected(int& i);
112	>	StuntDouble* beginSelected(int& i);
113	>	StuntDouble* nextSelected(int& i);
114
115	<	StuntDouble* beginUnselected(int& i);
116	<	StuntDouble* nextUnSelected(int& i);
115	>	StuntDouble* beginUnselected(int& i);
116	>	StuntDouble* nextUnSelected(int& i);
117	>
118	>	SelectionManager& operator&= (const SelectionManager &sman) {
119	>	bsSelection_ &= sman.bsSelection_;
120	>	return *this;
121	>	}
122
123	<	private:
124	<	SimInfo* info_;
125	<	BitSet bsSelection_;
126	<	std::vector<StuntDouble*> stuntdoubles_;
127	<	};
123	>	SelectionManager& operator|= (const SelectionManager &sman) {
124	>	bsSelection_ |= sman.bsSelection_;
125	>	return *this;
126	>	}
127	>
128	>	SelectionManager& operator^= (const SelectionManager &sman) {
129	>	bsSelection_ ^= sman.bsSelection_;
130	>	return *this;
131	>	}
132
133	+	SelectionManager& operator-= (const SelectionManager &sman) {
134	+	bsSelection_ -= sman.bsSelection_;
135	+	return *this;
136	+	}
137	+
138	+	friend SelectionManager operator| (const SelectionManager& sman1, const SelectionManager& sman2);
139	+	friend SelectionManager operator& (const SelectionManager& sman1, const SelectionManager& sman2);
140	+	friend SelectionManager operator^ (const SelectionManager& sman1, const SelectionManager& sman2);
141	+	friend SelectionManager operator-(const SelectionManager& sman1, const SelectionManager& sman2);
142	+
143	+	private:
144	+	SimInfo* info_;
145	+	OpenMDBitSet bsSelection_;
146	+	std::vector<StuntDouble*> stuntdoubles_;
147	+	};
148	+
149		}
150		#endif

Comparing:
trunk/src/selection/SelectionManager.hpp (property svn:keywords), Revision 315 by tim, Fri Feb 11 22:39:03 2005 UTC vs.
branches/development/src/selection/SelectionManager.hpp (property svn:keywords), Revision 1465 by chuckv, Fri Jul 9 23:08:25 2010 UTC

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