Some bugfixes (CholeskyDecomposition), more work on fluctuating charges, migrating stats stuff into frameData
updated copyright notices
Creating busticated version of OpenMD
removing cruft (atom numbers, do_pot, do_stress) from many modules and force managers
Adding property set to svn entries
Fixed bugs in Restraint, refactored RestReader and RestWriter
Parallel bugfix in RestraintForceManager Reverted back to hydrodynamics on triangular plates for SMIPDForceManager Removed thermalLength and thermalConductivity keywords from Globals. Bug tracking in openmdformat (not yet resolved).
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
more checks for parallel molIndex stuff
Bug fixes in the SelectionEvaluator and SelectionCompiler Added print option in Restraints
Added new restraint infrastructure Added MolecularRestraints Added ObjectRestraints Added RestraintStamp Updated thermodynamic integration to use ObjectRestraints Added Quaternion mathematics for twist swing decompositions Significantly updated RestWriter and RestReader to use dump-like files Added selections for x, y, and z coordinates of atoms Removed monolithic Restraints class Fixed a few bugs in gradients of Euler angles in DirectionalAtom and RigidBody Added some rotational capabilities to prinicpalAxisCalculator
This form allows you to request diffs between any two revisions of this file. For each of the two "sides" of the diff, enter a numeric revision.