Creating busticated version of OpenMD
Adding property set to svn entries
Added new restraint infrastructure Added MolecularRestraints Added ObjectRestraints Added RestraintStamp Updated thermodynamic integration to use ObjectRestraints Added Quaternion mathematics for twist swing decompositions Significantly updated RestWriter and RestReader to use dump-like files Added selections for x, y, and z coordinates of atoms Removed monolithic Restraints class Fixed a few bugs in gradients of Euler angles in DirectionalAtom and RigidBody Added some rotational capabilities to prinicpalAxisCalculator
updating configure process
First commit of the new restraints code
moved Package variable into subdirectory makefiles to speed up the building process
define DEV_ROOT as relative path
change Makefile to relative path
Import of OOPSE v. 2.0
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