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Comparing:
trunk/src/minimizers/CGFamilyMinimizer.hpp (file contents), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/minimizers/CGFamilyMinimizer.hpp (file contents), Revision 1665 by gezelter, Tue Nov 22 20:38:56 2011 UTC

# Line 1 | Line 1
1 < /*
1 > /*
2   * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3   *
4   * The University of Notre Dame grants you ("Licensee") a
# Line 6 | Line 6
6   * redistribute this software in source and binary code form, provided
7   * that the following conditions are met:
8   *
9 < * 1. Acknowledgement of the program authors must be made in any
10 < *    publication of scientific results based in part on use of the
11 < *    program.  An acceptable form of acknowledgement is citation of
12 < *    the article in which the program was described (Matthew
13 < *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14 < *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15 < *    Parallel Simulation Engine for Molecular Dynamics,"
16 < *    J. Comput. Chem. 26, pp. 252-271 (2005))
17 < *
18 < * 2. Redistributions of source code must retain the above copyright
9 > * 1. Redistributions of source code must retain the above copyright
10   *    notice, this list of conditions and the following disclaimer.
11   *
12 < * 3. Redistributions in binary form must reproduce the above copyright
12 > * 2. Redistributions in binary form must reproduce the above copyright
13   *    notice, this list of conditions and the following disclaimer in the
14   *    documentation and/or other materials provided with the
15   *    distribution.
# Line 37 | Line 28
28   * arising out of the use of or inability to use software, even if the
29   * University of Notre Dame has been advised of the possibility of
30   * such damages.
31 + *
32 + * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33 + * research, please cite the appropriate papers when you publish your
34 + * work.  Good starting points are:
35 + *                                                                      
36 + * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37 + * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 + * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 + * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
40 + * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
41   */
42  
43   #ifndef MINIMIZERS_CGFAMILYMINMIZER_HPP
44   #define MINIMIZERS_CGFAMILYMINMIZER_HPP
45  
46   #include "minimizers/Minimizer.hpp"
47 < namespace oopse {
47 > namespace OpenMD {
48  
49 < /**
50 < * @class CGFamilyMinimizer
51 < * Base class of conjugate gradient famlily minimzier
52 < */
53 < class CGFamilyMinimizer : public Minimizer{
54 <    public:
49 >  /**
50 >   * @class CGFamilyMinimizer
51 >   * Base class of conjugate gradient famlily minimzier
52 >   */
53 >  class CGFamilyMinimizer : public Minimizer{
54 >  public:
55                  
56 <        //check the convergence
57 <        virtual int checkConvg();
56 >    //check the convergence
57 >    virtual int checkConvg();
58  
59 <    protected:
60 <        CGFamilyMinimizer(SimInfo* info);
59 >  protected:
60 >    CGFamilyMinimizer(SimInfo* info);
61          
62 <        std::vector<double> direction;
63 <        std::vector<double> prevX;
64 <        std::vector<double> prevG;
65 <        double prevF;
66 <        double stepSize;
67 < };
62 >    std::vector<RealType> direction;
63 >    std::vector<RealType> prevX;
64 >    std::vector<RealType> prevG;
65 >    RealType prevF;
66 >    RealType stepSize;
67 >  };
68  
69   }
70  

Comparing:
trunk/src/minimizers/CGFamilyMinimizer.hpp (property svn:keywords), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/minimizers/CGFamilyMinimizer.hpp (property svn:keywords), Revision 1665 by gezelter, Tue Nov 22 20:38:56 2011 UTC

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