| 36 |
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
| 37 |
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
| 38 |
|
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
| 39 |
< |
* [4] Vardeman & Gezelter, in progress (2009). |
| 39 |
> |
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
| 40 |
> |
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
| 41 |
|
*/ |
| 42 |
|
|
| 42 |
– |
|
| 43 |
– |
/** |
| 44 |
– |
* @file StatWriter.hpp |
| 45 |
– |
* @author tlin |
| 46 |
– |
* @date 11/08/2004 |
| 47 |
– |
* @time 10:03am |
| 48 |
– |
* @version 1.0 |
| 49 |
– |
*/ |
| 50 |
– |
|
| 51 |
– |
|
| 43 |
|
#ifndef IO_STATWRITER_HPP |
| 44 |
|
#define IO_STATWRITER_HPP |
| 54 |
– |
#include <bitset> |
| 55 |
– |
#include <fstream> |
| 56 |
– |
#include <iostream> |
| 57 |
– |
#include <string> |
| 58 |
– |
#include <string.h> |
| 45 |
|
|
| 46 |
|
#include "brains/Stats.hpp" |
| 47 |
|
#include "utils/StringTokenizer.hpp" |
| 49 |
|
#include "utils/simError.h" |
| 50 |
|
|
| 51 |
|
namespace OpenMD { |
| 66 |
– |
|
| 67 |
– |
typedef std::bitset<Stats::ENDINDEX-Stats::BEGININDEX> StatsBitSet; |
| 68 |
– |
|
| 69 |
– |
StatsBitSet parseStatFileFormat(const std::string& format); |
| 52 |
|
|
| 53 |
|
/** |
| 54 |
|
* @class StatWriter StatWriter.hpp "io/StatWriter.hpp" |
| 56 |
|
*/ |
| 57 |
|
class StatWriter { |
| 58 |
|
public: |
| 59 |
< |
StatWriter(const std::string& filename, const StatsBitSet& mask); |
| 59 |
> |
StatWriter(const std::string& filename, Stats* stats); |
| 60 |
|
~StatWriter(); |
| 61 |
|
|
| 62 |
< |
void writeStat(const Stats& s); |
| 63 |
< |
|
| 82 |
< |
StatsBitSet getMask() { |
| 83 |
< |
return mask_; |
| 84 |
< |
} |
| 85 |
< |
|
| 62 |
> |
void writeStat(); |
| 63 |
> |
|
| 64 |
|
private: |
| 87 |
– |
|
| 65 |
|
void writeTitle(); |
| 66 |
+ |
void writeReal(int i); |
| 67 |
+ |
void writeVector(int i); |
| 68 |
+ |
void writeMatrix(int i); |
| 69 |
|
|
| 70 |
|
std::ofstream statfile_; |
| 71 |
< |
StatsBitSet mask_; |
| 92 |
< |
|
| 71 |
> |
Stats* stats_; |
| 72 |
|
}; |
| 94 |
– |
|
| 73 |
|
} |
| 74 |
< |
#endif //IO_STATWRITER_HPP |
| 74 |
> |
#endif |
