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Comparing:
trunk/src/io/SectionParser.hpp (file contents), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/io/SectionParser.hpp (file contents), Revision 1665 by gezelter, Tue Nov 22 20:38:56 2011 UTC

# Line 1 | Line 1
1 < /*
1 > /*
2   * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3   *
4   * The University of Notre Dame grants you ("Licensee") a
# Line 6 | Line 6
6   * redistribute this software in source and binary code form, provided
7   * that the following conditions are met:
8   *
9 < * 1. Acknowledgement of the program authors must be made in any
10 < *    publication of scientific results based in part on use of the
11 < *    program.  An acceptable form of acknowledgement is citation of
12 < *    the article in which the program was described (Matthew
13 < *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14 < *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15 < *    Parallel Simulation Engine for Molecular Dynamics,"
16 < *    J. Comput. Chem. 26, pp. 252-271 (2005))
17 < *
18 < * 2. Redistributions of source code must retain the above copyright
9 > * 1. Redistributions of source code must retain the above copyright
10   *    notice, this list of conditions and the following disclaimer.
11   *
12 < * 3. Redistributions in binary form must reproduce the above copyright
12 > * 2. Redistributions in binary form must reproduce the above copyright
13   *    notice, this list of conditions and the following disclaimer in the
14   *    documentation and/or other materials provided with the
15   *    distribution.
# Line 37 | Line 28
28   * arising out of the use of or inability to use software, even if the
29   * University of Notre Dame has been advised of the possibility of
30   * such damages.
31 + *
32 + * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33 + * research, please cite the appropriate papers when you publish your
34 + * work.  Good starting points are:
35 + *                                                                      
36 + * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37 + * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 + * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 + * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
40 + * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
41   */
42  
43   #ifndef IO_SECTIONPARSER_HPP
# Line 47 | Line 48
48  
49   #include "utils/StringTokenizer.hpp"
50  
51 < namespace oopse {
51 > namespace OpenMD {
52 >  
53 >  class ForceField;
54 >  
55 >  /**
56 >  * @class SectionParser SectionParser.hpp "io/SectionParser.hpp"
57 >   * @todo document
58 >   */
59 >  class SectionParser {
60 >  public:
61 >    virtual ~SectionParser() {}
62 >    void parse(std::istream& input, ForceField& ff, int lineNo);
63 >    
64 >    const std::string& getSectionName() const {
65 >      return sectionName_;
66 >    }
67 >    virtual void validateSection() {}
68 >  protected:
69 >    void setSectionName(const std::string& sectionName) {
70 >      sectionName_ = sectionName;
71 >    }
72 >    
73 >  private:
74 >    bool isEndSection(const std::string& line);
75 >    virtual void parseLine(ForceField& ff, const std::string& line, int lineNo) = 0;
76  
77 < class ForceField;
77 >    
78 >    std::string sectionName_;
79 >  };
80  
54    /**
55     * @class SectionParser SectionParser.hpp "io/SectionParser.hpp"
56     * @todo document
57     */
58    class SectionParser {
59        public:
60            virtual ~SectionParser() {}
61            void parse(std::istream& input, ForceField& ff, int lineNo);
81  
63            const std::string& getSectionName() const {
64                return sectionName_;
65            }
66
67        protected:
68            void setSectionName(const std::string& sectionName) {
69                sectionName_ = sectionName;
70            }
71            
72        private:
73
74            bool isEndSection(const std::string& line);
75            virtual void parseLine(ForceField& ff, const std::string& line, int lineNo) = 0;
76            std::string sectionName_;
77    };
78
79
82   }
83  
84   #endif //IO_SECTIONPARSER_HPP

Comparing:
trunk/src/io/SectionParser.hpp (property svn:keywords), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/io/SectionParser.hpp (property svn:keywords), Revision 1665 by gezelter, Tue Nov 22 20:38:56 2011 UTC

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