1 |
|
/* |
2 |
< |
* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. |
2 |
> |
* Copyright (c) 2009 The University of Notre Dame. All Rights Reserved. |
3 |
|
* |
4 |
|
* The University of Notre Dame grants you ("Licensee") a |
5 |
|
* non-exclusive, royalty free, license to use, modify and |
50 |
|
#include <iostream> |
51 |
|
#include <fstream> |
52 |
|
#include <string> |
53 |
– |
#include <string.h> |
54 |
– |
#include <stdio.h> |
55 |
– |
#include <stdlib.h> |
56 |
– |
#include <unistd.h> |
57 |
– |
#include <sys/types.h> |
58 |
– |
#include <sys/stat.h> |
59 |
– |
#include <algorithm> |
60 |
– |
#include <vector> |
53 |
|
#include <map> |
54 |
+ |
#include <vector> |
55 |
|
|
63 |
– |
#include "primitives/Atom.hpp" |
56 |
|
#include "brains/SimInfo.hpp" |
57 |
< |
#include "brains/Thermo.hpp" |
66 |
< |
#include "primitives/StuntDouble.hpp" |
57 |
> |
#include "restraints/Restraint.hpp" |
58 |
|
|
59 |
|
namespace oopse { |
60 |
|
|
61 |
|
class RestWriter{ |
62 |
|
|
63 |
|
public: |
64 |
< |
RestWriter( SimInfo* info ); |
64 |
> |
RestWriter(SimInfo* info, const std::string& filename, std::vector<Restraint*> restraints); |
65 |
|
~RestWriter(); |
75 |
– |
|
76 |
– |
void writeZAngFile(); |
77 |
– |
|
78 |
– |
private: |
79 |
– |
void writeZangle(std::ostream& finalOut); |
66 |
|
|
67 |
+ |
void writeRest(std::vector<std::map<int, Restraint::RealPair> > restInfo); |
68 |
+ |
|
69 |
+ |
private: |
70 |
|
SimInfo* info_; |
71 |
< |
std::string outName_; |
71 |
> |
std::ofstream output_; |
72 |
|
}; |
73 |
|
|
74 |
|
} |