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Comparing trunk/src/io/ParamConstraint.hpp (file contents):
Revision 1389 by skuang, Fri May 8 19:47:05 2009 UTC vs.
Revision 1390 by gezelter, Wed Nov 25 20:02:06 2009 UTC

# Line 6 | Line 6
6   * redistribute this software in source and binary code form, provided
7   * that the following conditions are met:
8   *
9 < * 1. Acknowledgement of the program authors must be made in any
10 < *    publication of scientific results based in part on use of the
11 < *    program.  An acceptable form of acknowledgement is citation of
12 < *    the article in which the program was described (Matthew
13 < *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14 < *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15 < *    Parallel Simulation Engine for Molecular Dynamics,"
16 < *    J. Comput. Chem. 26, pp. 252-271 (2005))
17 < *
18 < * 2. Redistributions of source code must retain the above copyright
9 > * 1. Redistributions of source code must retain the above copyright
10   *    notice, this list of conditions and the following disclaimer.
11   *
12 < * 3. Redistributions in binary form must reproduce the above copyright
12 > * 2. Redistributions in binary form must reproduce the above copyright
13   *    notice, this list of conditions and the following disclaimer in the
14   *    documentation and/or other materials provided with the
15   *    distribution.
# Line 37 | Line 28
28   * arising out of the use of or inability to use software, even if the
29   * University of Notre Dame has been advised of the possibility of
30   * such damages.
31 + *
32 + * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33 + * research, please cite the appropriate papers when you publish your
34 + * work.  Good starting points are:
35 + *                                                                      
36 + * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37 + * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 + * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 + * [4]  Vardeman & Gezelter, in progress (2009).                        
40   */
41  
42   #ifndef IO_PARAMCONSTRAINT_HPP
# Line 44 | Line 44
44   #include <sstream>
45   #include "utils/CaseConversion.hpp"
46   #include "utils/StringTokenizer.hpp"
47 < namespace oopse {
47 > namespace OpenMD {
48    /**
49     * This class allows to recognize constraint predicates, so that they can be combined using
50     * composition operators. Every constraint predicate must be derived from this class
# Line 181 | Line 181 | namespace oopse {
181  
182    struct EqualIgnoreCaseConstraint : public ParamConstraintFacade<EqualIgnoreCaseConstraint> {
183      
184 <    EqualIgnoreCaseConstraint(std::string rhs) : rhs_(oopse::toUpperCopy(rhs)){
184 >    EqualIgnoreCaseConstraint(std::string rhs) : rhs_(OpenMD::toUpperCopy(rhs)){
185        std::stringstream iss;
186        iss << "equal to (case insensitive) " << rhs;
187        this->description_ = iss.str();
188      }
189      
190      bool operator()( std::string data ) const {
191 <      return oopse::toUpperCopy(data) == rhs_;
191 >      return OpenMD::toUpperCopy(data) == rhs_;
192      }
193      
194    private:
# Line 196 | Line 196 | namespace oopse {
196    };
197  
198    struct ContainsConstraint :  public ParamConstraintFacade<EqualIgnoreCaseConstraint> {
199 <    ContainsConstraint(std::string rhs) : rhs_(oopse::toUpperCopy(rhs)){
199 >    ContainsConstraint(std::string rhs) : rhs_(OpenMD::toUpperCopy(rhs)){
200        std::stringstream iss;
201        iss << "contains " << rhs;
202        this->description_ = iss.str();
203      }
204      
205      bool operator()( std::string data ) const {
206 <      oopse::StringTokenizer tokenizer(oopse::toUpperCopy(data),  " ,;|\t\n\r");
206 >      OpenMD::StringTokenizer tokenizer(OpenMD::toUpperCopy(data),  " ,;|\t\n\r");
207        while (tokenizer.hasMoreTokens()) {
208          if (tokenizer.nextToken() == rhs_) {
209            return true;

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