52 |
|
|
53 |
|
#include "io/ParamConstraint.hpp" |
54 |
|
|
55 |
– |
#define DefineParameter(NAME,KEYWORD) \ |
56 |
– |
NAME.setKeyword(KEYWORD); \ |
57 |
– |
parameters_.insert(std::make_pair(std::string(KEYWORD), &NAME)); |
55 |
|
|
59 |
– |
#define DefineOptionalParameter(NAME,KEYWORD) \ |
60 |
– |
NAME.setKeyword(KEYWORD); NAME.setOptional(true); \ |
61 |
– |
parameters_.insert(std::make_pair(std::string(KEYWORD), &NAME)); |
62 |
– |
|
63 |
– |
#define DefineOptionalParameterWithDefaultValue(NAME,KEYWORD, DEFAULTVALUE) \ |
64 |
– |
NAME.setKeyword(KEYWORD); NAME.setOptional(true); NAME.setDefaultValue(DEFAULTVALUE); \ |
65 |
– |
parameters_.insert(std::make_pair(std::string(KEYWORD), &NAME)); |
66 |
– |
|
67 |
– |
#define CheckParameter(NAME, CONSTRAINT) \ |
68 |
– |
if (!NAME.empty()) { if (!(CONSTRAINT)(NAME.getData())) { sprintf(painCave.errMsg,"Error in checking %s : should be %s\n",NAME.getKeyword().c_str(),(CONSTRAINT).getConstraintDescription().c_str()); painCave.isFatal = 1; painCave.severity = OOPSE_ERROR; simError();} } |
69 |
– |
|
56 |
|
Globals::Globals(){ |
57 |
|
|
58 |
|
DefineParameter(ForceField, "forceField") |
107 |
|
DefineOptionalParameter(SurfaceTension, "surfaceTension"); |
108 |
|
DefineOptionalParameter(PrintPressureTensor, "printPressureTensor"); |
109 |
|
DefineOptionalParameter(ElectrostaticSummationMethod, "electrostaticSummationMethod"); |
110 |
< |
DefineOptionalParameter(ScreeningMethod, "screeningMethod"); |
110 |
> |
DefineOptionalParameter(ElectrostaticScreeningMethod, "electrostaticScreeningMethod"); |
111 |
|
DefineOptionalParameter(CutoffPolicy, "cutoffPolicy"); |
112 |
< |
|
112 |
> |
DefineOptionalParameter(SwitchingFunctionType, "switchingFunctionType"); |
113 |
|
DefineOptionalParameterWithDefaultValue(MixingRule, "mixingRule", "standard"); |
114 |
|
DefineOptionalParameterWithDefaultValue(UsePeriodicBoundaryConditions, "usePeriodicBoundaryConditions", true); |
115 |
|
DefineOptionalParameterWithDefaultValue(UseInitalTime, "useInitialTime", false); |
120 |
|
DefineOptionalParameterWithDefaultValue(ThermIntDistSpringConst, "thermIntDistSpringConst", 6.0); |
121 |
|
DefineOptionalParameterWithDefaultValue(ThermIntThetaSpringConst, "thermIntThetaSpringConst", 7.5); |
122 |
|
DefineOptionalParameterWithDefaultValue(ThermIntOmegaSpringConst, "thermIntOmegaSpringConst", 13.5); |
123 |
< |
DefineOptionalParameterWithDefaultValue(DampingAlpha, "dampingAlpha", 1.5); |
123 |
> |
DefineOptionalParameterWithDefaultValue(DampingAlpha, "dampingAlpha", 0.2); |
124 |
|
DefineOptionalParameterWithDefaultValue(CompressDumpFile, "compressDumpFile", 0); |
125 |
+ |
DefineOptionalParameterWithDefaultValue(OutputForceVector, "outputForceVector", 0); |
126 |
|
DefineOptionalParameterWithDefaultValue(SkinThickness, "skinThickness", 1.0); |
127 |
|
DefineOptionalParameterWithDefaultValue(StatFileFormat, "statFileFormat", "TIME|TOTAL_ENERGY|POTENTIAL_ENERGY|KINETIC_ENERGY|TEMPERATURE|PRESSURE|VOLUME|CONSERVED_QUANTITY"); |
128 |
|
|
327 |
|
CheckParameter(ForceField, isNotEmpty()); |
328 |
|
CheckParameter(NComponents,isPositive()); |
329 |
|
CheckParameter(TargetTemp, isPositive()); |
330 |
< |
CheckParameter(Ensemble, isEqualIgnoreCase(std::string("NVE")) || isEqualIgnoreCase(std::string("NVT")) || |
331 |
< |
isEqualIgnoreCase(std::string("NPTi")) || isEqualIgnoreCase(std::string("NPTf"))|| |
332 |
< |
isEqualIgnoreCase(std::string("NPTxyz")) ); |
330 |
> |
CheckParameter(Ensemble, isEqualIgnoreCase(std::string("NVE")) || |
331 |
> |
isEqualIgnoreCase(std::string("NVT")) || |
332 |
> |
isEqualIgnoreCase(std::string("NPTi")) || |
333 |
> |
isEqualIgnoreCase(std::string("NPTf")) || |
334 |
> |
isEqualIgnoreCase(std::string("NPTxyz")) ); |
335 |
|
CheckParameter(Dt, isPositive()); |
336 |
|
CheckParameter(RunTime, isPositive()); |
337 |
|
CheckParameter(InitialConfig, isNotEmpty()); |
357 |
|
CheckParameter(ZconsTol, isPositive()); |
358 |
|
//CheckParameter(ZconsForcePolicy,); |
359 |
|
CheckParameter(Seed, isPositive()); |
360 |
< |
CheckParameter(Minimizer, isEqualIgnoreCase(std::string("SD")) || isEqualIgnoreCase(std::string("CG"))); |
360 |
> |
CheckParameter(Minimizer, isEqualIgnoreCase(std::string("SD")) || |
361 |
> |
isEqualIgnoreCase(std::string("CG"))); |
362 |
|
CheckParameter(MinimizerMaxIter, isPositive()); |
363 |
|
CheckParameter(MinimizerWriteFrq, isPositive()); |
364 |
|
CheckParameter(MinimizerStepSize, isPositive()); |
376 |
|
CheckParameter(ThermIntThetaSpringConst, isPositive()); |
377 |
|
CheckParameter(ThermIntOmegaSpringConst, isPositive()); |
378 |
|
CheckParameter(SurfaceTension, isPositive()); |
379 |
< |
CheckParameter(ElectrostaticSummationMethod, isEqualIgnoreCase(std::string("NONE")) || isEqualIgnoreCase(std::string("SHIFTED_POTENTIAL")) || isEqualIgnoreCase(std::string("SHIFTED_FORCE")) || isEqualIgnoreCase(std::string("REACTION_FIELD"))); |
380 |
< |
CheckParameter(ScreeningMethod, isEqualIgnoreCase(std::string("UNDAMPED")) || isEqualIgnoreCase(std::string("DAMPED"))); |
381 |
< |
CheckParameter(CutoffPolicy, isEqualIgnoreCase(std::string("MIX")) || isEqualIgnoreCase(std::string("MAX")) || isEqualIgnoreCase(std::string("TRADITIONAL"))); |
379 |
> |
CheckParameter(ElectrostaticSummationMethod, |
380 |
> |
isEqualIgnoreCase(std::string("NONE")) || |
381 |
> |
isEqualIgnoreCase(std::string("SHIFTED_POTENTIAL")) || |
382 |
> |
isEqualIgnoreCase(std::string("SHIFTED_FORCE")) || |
383 |
> |
isEqualIgnoreCase(std::string("REACTION_FIELD"))); |
384 |
> |
CheckParameter(ElectrostaticScreeningMethod, |
385 |
> |
isEqualIgnoreCase(std::string("UNDAMPED")) || |
386 |
> |
isEqualIgnoreCase(std::string("DAMPED"))); |
387 |
> |
CheckParameter(CutoffPolicy, isEqualIgnoreCase(std::string("MIX")) || |
388 |
> |
isEqualIgnoreCase(std::string("MAX")) || |
389 |
> |
isEqualIgnoreCase(std::string("TRADITIONAL"))); |
390 |
> |
CheckParameter(SwitchingFunctionType, |
391 |
> |
isEqualIgnoreCase(std::string("CUBIC")) || |
392 |
> |
isEqualIgnoreCase(std::string("FIFTH_ORDER_POLYNOMIAL"))); |
393 |
|
//CheckParameter(StatFileFormat,); |
394 |
|
//CheckParameter(MixingRule,); |
395 |
|
CheckParameter(OrthoBoxTolerance, isPositive()); |
396 |
|
CheckParameter(ThermIntDistSpringConst, isPositive()); |
397 |
|
CheckParameter(ThermIntThetaSpringConst, isPositive()); |
398 |
|
CheckParameter(ThermIntOmegaSpringConst, isPositive()); |
399 |
< |
CheckParameter(DampingAlpha,isPositive()); |
399 |
> |
CheckParameter(DampingAlpha,isNonNegative()); |
400 |
|
CheckParameter(SkinThickness, isPositive()); |
401 |
|
|
402 |
|
//@todo memory leak |