116 |
|
#define G_THERM_INT_DIST_SPRING 54 |
117 |
|
#define G_THERM_INT_THETA_SPRING 55 |
118 |
|
#define G_THERM_INT_OMEGA_SPRING 56 |
119 |
< |
#define G_TARGETSTRESS 57 |
119 |
> |
#define G_SURFACETENSION 57 |
120 |
> |
#define G_PRINTPRESSURETENSOR 58 |
121 |
> |
#define G_COULOMBIC_CORRECTION 59 |
122 |
> |
#define G_DAMPING_ALPHA 60 |
123 |
> |
#define G_CUTOFFPOLICY 61 |
124 |
|
|
125 |
|
Globals::Globals(){ |
126 |
|
initalize(); |
195 |
|
command_table.insert(CommandMapType::value_type("thermIntDistSpringConst", G_THERM_INT_DIST_SPRING)); |
196 |
|
command_table.insert(CommandMapType::value_type("thermIntThetaSpringConst", G_THERM_INT_THETA_SPRING)); |
197 |
|
command_table.insert(CommandMapType::value_type("thermIntOmegaSpringConst", G_THERM_INT_OMEGA_SPRING)); |
198 |
< |
command_table.insert(CommandMapType::value_type("targetStress", G_TARGETSTRESS)); |
199 |
< |
|
198 |
> |
command_table.insert(CommandMapType::value_type("surfaceTension", G_SURFACETENSION)); |
199 |
> |
command_table.insert(CommandMapType::value_type("printPressureTensor", G_PRINTPRESSURETENSOR)); |
200 |
> |
command_table.insert(CommandMapType::value_type("coulombicCorrection", G_COULOMBIC_CORRECTION)); |
201 |
> |
command_table.insert(CommandMapType::value_type("dampingAlpha", G_DAMPING_ALPHA)); |
202 |
> |
command_table.insert(CommandMapType::value_type("cutoffPolicy", G_CUTOFFPOLICY)); |
203 |
|
|
204 |
|
strcpy( mixingRule,"standard"); //default mixing rules to standard. |
205 |
|
usePBC = 1; //default periodic boundry conditions to on |
209 |
|
orthoBoxTolerance = 1E-6; |
210 |
|
useSolidThermInt = 0; // default solid-state thermodynamic integration to off |
211 |
|
useLiquidThermInt = 0; // default liquid thermodynamic integration to off |
212 |
+ |
dampingAlpha = 1.5; // default damping parameter in Wolf Electrostatics |
213 |
|
|
214 |
|
have_force_field = 0; |
215 |
|
have_n_components = 0; |
262 |
|
have_dist_spring_constant = 0; |
263 |
|
have_theta_spring_constant = 0; |
264 |
|
have_omega_spring_constant = 0; |
265 |
< |
have_targetStress = 0; |
265 |
> |
have_surface_tension = 0; |
266 |
> |
have_print_pressure_tensor = 0; |
267 |
> |
have_coulombic_correction = 0; |
268 |
> |
have_damping_alpha = 0; |
269 |
> |
have_cutoff_policy = 0; |
270 |
|
} |
271 |
|
|
272 |
|
int Globals::newComponent( event* the_event ){ |
1854 |
|
} |
1855 |
|
break; |
1856 |
|
|
1857 |
< |
case G_THERM_INT_THETA_SPRING: |
1857 |
> |
case G_SURFACETENSION: |
1858 |
|
switch( the_type ){ |
1859 |
|
|
1860 |
|
case STRING: |
1861 |
|
the_event->err_msg = |
1862 |
< |
strdup( "Error in parsing meta-data file!\n\ttargetStress is not a double or int.\n" ); |
1862 |
> |
strdup( "Error in parsing meta-data file!\n\tsurfaceTension is not a double or int.\n" ); |
1863 |
|
return 1; |
1864 |
|
break; |
1865 |
|
|
1866 |
|
case DOUBLE: |
1867 |
< |
target_stress= the_event->evt.asmt.rhs.dval; |
1868 |
< |
have_targetstress = 1; |
1867 |
> |
surface_tension= the_event->evt.asmt.rhs.dval; |
1868 |
> |
have_surface_tension = 1; |
1869 |
|
return 1; |
1870 |
|
break; |
1871 |
|
|
1872 |
|
case INT: |
1873 |
< |
target_stress = (double)the_event->evt.asmt.rhs.dval; |
1874 |
< |
have_targetstress = 1; |
1873 |
> |
surface_tension = (double)the_event->evt.asmt.rhs.dval; |
1874 |
> |
have_surface_tension = 1; |
1875 |
|
return 1; |
1876 |
|
break; |
1877 |
|
|
1878 |
|
default: |
1879 |
|
the_event->err_msg = |
1880 |
< |
strdup( "Error in parsing meta-data file!\n\tttargetStress unrecognized.\n" ); |
1880 |
> |
strdup( "Error in parsing meta-data file!\n\tsurfaceTension unrecognized.\n" ); |
1881 |
|
return 0; |
1882 |
|
break; |
1883 |
+ |
} |
1884 |
+ |
break; |
1885 |
+ |
|
1886 |
+ |
case G_PRINTPRESSURETENSOR: |
1887 |
+ |
if( the_type == STRING ){ |
1888 |
+ |
|
1889 |
+ |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) { |
1890 |
+ |
have_print_pressure_tensor= 1; |
1891 |
+ |
print_pressure_tensor = 1; |
1892 |
+ |
} else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) { |
1893 |
+ |
have_print_pressure_tensor= 1; |
1894 |
+ |
print_pressure_tensor = 0; |
1895 |
+ |
} else{ |
1896 |
+ |
the_event->err_msg = |
1897 |
+ |
strdup( "Error in parsing meta-data file!\n\tprintPressureTensor was not \"true\" or \"false\".\n" ); |
1898 |
+ |
return 0; |
1899 |
|
} |
1900 |
+ |
return 1; |
1901 |
+ |
} |
1902 |
+ |
|
1903 |
+ |
the_event->err_msg = |
1904 |
+ |
strdup( "Error in parsing meta-data file!\n\tprintPressureTensor was not \"true\" or \"false\".\n" ); |
1905 |
+ |
return 0; |
1906 |
+ |
break; |
1907 |
+ |
|
1908 |
+ |
case G_COULOMBIC_CORRECTION: |
1909 |
+ |
switch( the_type ){ |
1910 |
+ |
|
1911 |
+ |
case STRING: |
1912 |
+ |
strcpy(coulombicCorrection, the_event->evt.asmt.rhs.sval); |
1913 |
+ |
|
1914 |
+ |
for(int i = 0; coulombicCorrection[i] != '\0'; i++) |
1915 |
+ |
{ |
1916 |
+ |
coulombicCorrection[i] = toupper(coulombicCorrection[i]); |
1917 |
+ |
} |
1918 |
+ |
have_coulombic_correction = 1; |
1919 |
+ |
return 1; |
1920 |
+ |
break; |
1921 |
+ |
|
1922 |
+ |
case DOUBLE: |
1923 |
+ |
the_event->err_msg = |
1924 |
+ |
strdup( "Error in parsing meta-data file!\n\tcoulombicCorrection should be a string!\n" ); |
1925 |
+ |
return 0; |
1926 |
+ |
break; |
1927 |
+ |
|
1928 |
+ |
case INT: |
1929 |
+ |
the_event->err_msg = |
1930 |
+ |
strdup( "Error in parsing meta-data file!\n\tcoulombicCorrection should be a string!\n" ); |
1931 |
+ |
return 0; |
1932 |
+ |
break; |
1933 |
+ |
|
1934 |
+ |
default: |
1935 |
+ |
the_event->err_msg = |
1936 |
+ |
strdup( "Error in parsing meta-data file!\n\tcoulombicCorrection unrecognized.\n" ); |
1937 |
+ |
return 0; |
1938 |
+ |
break; |
1939 |
+ |
} |
1940 |
+ |
break; |
1941 |
+ |
|
1942 |
+ |
case G_DAMPING_ALPHA: |
1943 |
+ |
switch( the_type ){ |
1944 |
+ |
|
1945 |
+ |
case STRING: |
1946 |
+ |
the_event->err_msg = |
1947 |
+ |
strdup( "Error in parsing meta-data file!\n\tdampingAlpha is not a double or int.\n" ); |
1948 |
+ |
return 1; |
1949 |
|
break; |
1950 |
|
|
1951 |
+ |
case DOUBLE: |
1952 |
+ |
dampingAlpha = the_event->evt.asmt.rhs.dval; |
1953 |
+ |
have_damping_alpha = 1; |
1954 |
+ |
return 1; |
1955 |
+ |
break; |
1956 |
+ |
|
1957 |
+ |
case INT: |
1958 |
+ |
dampingAlpha = (double)the_event->evt.asmt.rhs.dval; |
1959 |
+ |
have_damping_alpha = 1; |
1960 |
+ |
return 1; |
1961 |
+ |
break; |
1962 |
+ |
|
1963 |
+ |
default: |
1964 |
+ |
the_event->err_msg = |
1965 |
+ |
strdup( "Error in parsing meta-data file!\n\tdampingAlpha unrecognized.\n" ); |
1966 |
+ |
return 0; |
1967 |
+ |
break; |
1968 |
+ |
} |
1969 |
+ |
break; |
1970 |
|
|
1971 |
+ |
case G_CUTOFFPOLICY: |
1972 |
+ |
switch( the_type ){ |
1973 |
+ |
|
1974 |
+ |
case STRING: |
1975 |
+ |
strcpy(cutoffPolicy, the_event->evt.asmt.rhs.sval); |
1976 |
+ |
|
1977 |
+ |
for(int i = 0; cutoffPolicy[i] != '\0'; i++) |
1978 |
+ |
{ |
1979 |
+ |
cutoffPolicy[i] = toupper(cutoffPolicy[i]); |
1980 |
+ |
} |
1981 |
+ |
have_cutoff_policy = 1; |
1982 |
+ |
return 1; |
1983 |
+ |
break; |
1984 |
+ |
|
1985 |
+ |
case DOUBLE: |
1986 |
+ |
the_event->err_msg = |
1987 |
+ |
strdup( "Error in parsing meta-data file!\n\tcutoffPolicy should be a string!\n" ); |
1988 |
+ |
return 0; |
1989 |
+ |
break; |
1990 |
+ |
|
1991 |
+ |
case INT: |
1992 |
+ |
the_event->err_msg = |
1993 |
+ |
strdup( "Error in parsing meta-data file!\n\tcutoffPolicy should be a string!\n" ); |
1994 |
+ |
return 0; |
1995 |
+ |
break; |
1996 |
+ |
|
1997 |
+ |
default: |
1998 |
+ |
the_event->err_msg = |
1999 |
+ |
strdup( "Error in parsing meta-data file!\n\tcutoffPolicy unrecognized.\n" ); |
2000 |
+ |
return 0; |
2001 |
+ |
break; |
2002 |
+ |
} |
2003 |
+ |
break; |
2004 |
+ |
|
2005 |
|
|
2006 |
|
// add more token cases here. |
2007 |
|
} |