35 |
|
* |
36 |
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
37 |
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
38 |
< |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
38 |
> |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). |
39 |
|
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
40 |
|
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
41 |
|
*/ |
527 |
|
|
528 |
|
StringTokenizer tokenizer(line); |
529 |
|
int nTokens; |
530 |
< |
|
530 |
> |
|
531 |
|
nTokens = tokenizer.countTokens(); |
532 |
|
|
533 |
|
if (nTokens < 2) { |
647 |
|
|
648 |
|
void DumpReader::readSiteData(std::istream& inputStream) { |
649 |
|
|
650 |
– |
inputStream.getline(buffer, bufferSize); |
650 |
|
std::string line(buffer); |
651 |
+ |
|
652 |
+ |
// We already found the starting <SiteData> tag or we wouldn't be |
653 |
+ |
// here, so just start parsing until we get to the ending |
654 |
+ |
// </SiteData> tag: |
655 |
|
|
653 |
– |
if (line.find("<SiteData>") == std::string::npos) { |
654 |
– |
// site data isn't required for a simulation, so skip |
655 |
– |
return; |
656 |
– |
} |
657 |
– |
|
656 |
|
while(inputStream.getline(buffer, bufferSize)) { |
657 |
|
line = buffer; |
658 |
|
|