56 |
|
Snapshot* curSnapshot = info_->getSnapshotManager()->getCurrentSnapshot(); |
57 |
|
potVec pot = curSnapshot->getLongRangePotentials(); |
58 |
|
potVec exPot = curSnapshot->getExcludedPotentials(); |
59 |
– |
cerr << "val p= " << pot[ELECTROSTATIC_FAMILY] << "\n"; |
60 |
– |
cerr << "val e= " << exPot[ELECTROSTATIC_FAMILY] << "\n"; |
59 |
|
|
60 |
|
return pot[ELECTROSTATIC_FAMILY] + exPot[ELECTROSTATIC_FAMILY]; |
61 |
|
} |
67 |
|
|
68 |
|
forceMan_->calcForces(); |
69 |
|
fqConstraints_->applyConstraints(); |
70 |
< |
cerr << "grad\n"; |
70 |
> |
|
71 |
|
getGrad(grad); |
72 |
|
} |
73 |
|
|
84 |
|
Snapshot* curSnapshot = info_->getSnapshotManager()->getCurrentSnapshot(); |
85 |
|
potVec pot = curSnapshot->getLongRangePotentials(); |
86 |
|
potVec exPot = curSnapshot->getExcludedPotentials(); |
89 |
– |
cerr << "vang p= " << pot[ELECTROSTATIC_FAMILY] << "\n"; |
90 |
– |
cerr << "vang e= " << exPot[ELECTROSTATIC_FAMILY] << "\n"; |
87 |
|
|
88 |
|
return pot[ELECTROSTATIC_FAMILY] + exPot[ELECTROSTATIC_FAMILY]; |
89 |
|
} |
102 |
|
atom = mol->nextFluctuatingCharge(j)) { |
103 |
|
|
104 |
|
atom->setFlucQPos(x[index++]); |
109 |
– |
cerr << "setting charge = " << x[index -1] << "\n"; |
105 |
|
} |
106 |
|
} |
107 |
|
} |
120 |
|
for (atom = mol->beginFluctuatingCharge(j); atom != NULL; |
121 |
|
atom = mol->nextFluctuatingCharge(j)) { |
122 |
|
|
123 |
< |
grad[index++] = atom->getFlucQFrc(); |
129 |
< |
cerr << "getting grad = " << grad[index -1] << "\n"; |
123 |
> |
grad[index++] = -atom->getFlucQFrc(); |
124 |
|
} |
125 |
|
} |
126 |
|
} |