Various fixes for the RNEMD output.
Various fixes required to compile OpenMD with the MS Visual C++ compiler
Refactored Snapshot and Stats to use the Accumulator classes. Collected a number of methods into Thermo that belonged there.
Some bugfixes (CholeskyDecomposition), more work on fluctuating charges, migrating stats stuff into frameData
Bug fixes for heat flux import
Added an adapter layer between the AtomType and the rest of the code to handle the bolt-on capabilities of new types. Fixed a long-standing bug in how storageLayout was being set to the maximum possible value. Started to add infrastructure for Polarizable and fluc-Q calculations.
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