| 73 | 
  | 
                                nGlobalIntegrableObjects_(0), nGlobalRigidBodies_(0), | 
| 74 | 
  | 
                                nAtoms_(0), nBonds_(0),  nBends_(0), nTorsions_(0), nRigidBodies_(0), | 
| 75 | 
  | 
                                nIntegrableObjects_(0),  nCutoffGroups_(0), nConstraints_(0), | 
| 76 | 
< | 
                                sman_(NULL), fortranInitialized_(false), selectMan_(NULL) { | 
| 76 | 
> | 
                                sman_(NULL), fortranInitialized_(false) { | 
| 77 | 
  | 
 | 
| 78 | 
  | 
             | 
| 79 | 
  | 
    std::vector<std::pair<MoleculeStamp*, int> >::iterator i; | 
| 139 | 
  | 
    molToProcMap_.resize(nGlobalMols_); | 
| 140 | 
  | 
#endif | 
| 141 | 
  | 
 | 
| 142 | 
– | 
    selectMan_ = new SelectionManager(this); | 
| 143 | 
– | 
    selectMan_->selectAll(); | 
| 142 | 
  | 
} | 
| 143 | 
  | 
 | 
| 144 | 
  | 
SimInfo::~SimInfo() { | 
| 145 | 
< | 
    //MemoryUtils::deleteVectorOfPointer(molecules_); | 
| 146 | 
< | 
 | 
| 147 | 
< | 
    MemoryUtils::deleteVectorOfPointer(moleculeStamps_); | 
| 145 | 
> | 
    std::map<int, Molecule*>::iterator i; | 
| 146 | 
> | 
    for (i = molecules_.begin(); i != molecules_.end(); ++i) { | 
| 147 | 
> | 
        delete i->second; | 
| 148 | 
> | 
    } | 
| 149 | 
> | 
    molecules_.clear(); | 
| 150 | 
  | 
     | 
| 151 | 
+ | 
    MemoryUtils::deletePointers(moleculeStamps_); | 
| 152 | 
+ | 
     | 
| 153 | 
  | 
    delete sman_; | 
| 154 | 
  | 
    delete simParams_; | 
| 155 | 
  | 
    delete forceField_; | 
| 154 | 
– | 
    delete selectMan_; | 
| 156 | 
  | 
} | 
| 157 | 
  | 
 | 
| 158 | 
  | 
int SimInfo::getNGlobalConstraints() { | 
| 836 | 
  | 
} | 
| 837 | 
  | 
 | 
| 838 | 
  | 
void SimInfo::setSnapshotManager(SnapshotManager* sman) { | 
| 839 | 
< | 
    if (sman_ == sman_) { | 
| 840 | 
< | 
        return; | 
| 841 | 
< | 
    } | 
| 839 | 
> | 
    //if (sman_ == sman_) { | 
| 840 | 
> | 
    //    return; | 
| 841 | 
> | 
    //} | 
| 842 | 
  | 
     | 
| 843 | 
< | 
    delete sman_; | 
| 843 | 
> | 
    //delete sman_; | 
| 844 | 
  | 
    sman_ = sman; | 
| 845 | 
  | 
 | 
| 846 | 
  | 
    Molecule* mol; |