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  void SimInfo::prepareTopology() { | 
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    int nExclude, nOneTwo, nOneThree, nOneFour; | 
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    //calculate mass ratio of cutoff group | 
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    SimInfo::MoleculeIterator mi; | 
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    }     | 
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    //scan topology  | 
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    nExclude = excludedInteractions_.getSize(); | 
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    nOneTwo = oneTwoInteractions_.getSize(); | 
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    nOneThree = oneThreeInteractions_.getSize(); | 
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    nOneFour = oneFourInteractions_.getSize(); | 
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    int* excludeList = excludedInteractions_.getPairList(); | 
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    int* oneTwoList = oneTwoInteractions_.getPairList(); |