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root/OpenMD/branches/development/src/applications/thermalizer/thermalizerCmd.cpp
Revision: 1465
Committed: Fri Jul 9 23:08:25 2010 UTC (14 years, 9 months ago) by chuckv
Content type: text/plain
Original Path: branches/development/src/applications/thermalizer/thermalizerCmd.c
File size: 15170 byte(s)
Log Message:
Creating busticated version of OpenMD

File Contents

# User Rev Content
1 gezelter 1083 /*
2 gezelter 1390 File autogenerated by gengetopt version 2.22
3 gezelter 1083 generated with the following command:
4 gezelter 1390 gengetopt -u -F thermalizerCmd
5 gezelter 1083
6     The developers of gengetopt consider the fixed text that goes in all
7     gengetopt output files to be in the public domain:
8     we make no copyright claims on it.
9     */
10    
11     /* If we use autoconf. */
12     #ifdef HAVE_CONFIG_H
13     #include "config.h"
14     #endif
15    
16     #include <stdio.h>
17     #include <stdlib.h>
18     #include <string.h>
19    
20     #include "getopt.h"
21    
22     #include "thermalizerCmd.h"
23    
24 gezelter 1390 const char *gengetopt_args_info_purpose = "Resamples the velocities for all the integrable objects in an OpenMD file from \na Maxwell-Boltzmann distribution.";
25 gezelter 1083
26     const char *gengetopt_args_info_usage = "Usage: thermalizer [OPTIONS]... [FILES]...";
27    
28 gezelter 1390 const char *gengetopt_args_info_description = "";
29    
30 gezelter 1083 const char *gengetopt_args_info_help[] = {
31     " -h, --help Print help and exit",
32     " -V, --version Print version and exit",
33     " -o, --output=STRING Output file name",
34     " -t, --temperature=DOUBLE temperature (K)",
35     0
36     };
37    
38 gezelter 1390 typedef enum {ARG_NO
39     , ARG_STRING
40     , ARG_DOUBLE
41     } cmdline_parser_arg_type;
42    
43 gezelter 1083 static
44     void clear_given (struct gengetopt_args_info *args_info);
45     static
46     void clear_args (struct gengetopt_args_info *args_info);
47    
48     static int
49 gezelter 1390 cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info,
50     struct cmdline_parser_params *params, const char *additional_error);
51 gezelter 1083
52     static int
53     cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error);
54    
55     static char *
56     gengetopt_strdup (const char *s);
57    
58     static
59     void clear_given (struct gengetopt_args_info *args_info)
60     {
61     args_info->help_given = 0 ;
62     args_info->version_given = 0 ;
63     args_info->output_given = 0 ;
64     args_info->temperature_given = 0 ;
65     }
66    
67     static
68     void clear_args (struct gengetopt_args_info *args_info)
69     {
70     args_info->output_arg = NULL;
71     args_info->output_orig = NULL;
72     args_info->temperature_orig = NULL;
73    
74     }
75    
76     static
77     void init_args_info(struct gengetopt_args_info *args_info)
78     {
79 gezelter 1390
80    
81 gezelter 1083 args_info->help_help = gengetopt_args_info_help[0] ;
82     args_info->version_help = gengetopt_args_info_help[1] ;
83     args_info->output_help = gengetopt_args_info_help[2] ;
84     args_info->temperature_help = gengetopt_args_info_help[3] ;
85    
86     }
87    
88     void
89     cmdline_parser_print_version (void)
90     {
91     printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION);
92     }
93    
94 gezelter 1390 static void print_help_common(void) {
95 gezelter 1083 cmdline_parser_print_version ();
96    
97     if (strlen(gengetopt_args_info_purpose) > 0)
98     printf("\n%s\n", gengetopt_args_info_purpose);
99    
100 gezelter 1390 if (strlen(gengetopt_args_info_usage) > 0)
101     printf("\n%s\n", gengetopt_args_info_usage);
102    
103     printf("\n");
104    
105     if (strlen(gengetopt_args_info_description) > 0)
106     printf("%s\n", gengetopt_args_info_description);
107     }
108    
109     void
110     cmdline_parser_print_help (void)
111     {
112     int i = 0;
113     print_help_common();
114 gezelter 1083 while (gengetopt_args_info_help[i])
115     printf("%s\n", gengetopt_args_info_help[i++]);
116     }
117    
118     void
119     cmdline_parser_init (struct gengetopt_args_info *args_info)
120     {
121     clear_given (args_info);
122     clear_args (args_info);
123     init_args_info (args_info);
124    
125     args_info->inputs = NULL;
126     args_info->inputs_num = 0;
127     }
128    
129 gezelter 1390 void
130     cmdline_parser_params_init(struct cmdline_parser_params *params)
131     {
132     if (params)
133     {
134     params->override = 0;
135     params->initialize = 1;
136     params->check_required = 1;
137     params->check_ambiguity = 0;
138     params->print_errors = 1;
139     }
140     }
141    
142     struct cmdline_parser_params *
143     cmdline_parser_params_create(void)
144     {
145     struct cmdline_parser_params *params =
146     (struct cmdline_parser_params *)malloc(sizeof(struct cmdline_parser_params));
147     cmdline_parser_params_init(params);
148     return params;
149     }
150    
151 gezelter 1083 static void
152 gezelter 1390 free_string_field (char **s)
153     {
154     if (*s)
155     {
156     free (*s);
157     *s = 0;
158     }
159     }
160    
161    
162     static void
163 gezelter 1083 cmdline_parser_release (struct gengetopt_args_info *args_info)
164     {
165     unsigned int i;
166 gezelter 1390 free_string_field (&(args_info->output_arg));
167     free_string_field (&(args_info->output_orig));
168     free_string_field (&(args_info->temperature_orig));
169 gezelter 1083
170 gezelter 1390
171 gezelter 1083 for (i = 0; i < args_info->inputs_num; ++i)
172     free (args_info->inputs [i]);
173 gezelter 1390
174 gezelter 1083 if (args_info->inputs_num)
175     free (args_info->inputs);
176 gezelter 1390
177 gezelter 1083 clear_given (args_info);
178     }
179    
180 gezelter 1390
181     static void
182     write_into_file(FILE *outfile, const char *opt, const char *arg, char *values[])
183     {
184     if (arg) {
185     fprintf(outfile, "%s=\"%s\"\n", opt, arg);
186     } else {
187     fprintf(outfile, "%s\n", opt);
188     }
189     }
190    
191    
192 gezelter 1083 int
193 gezelter 1390 cmdline_parser_dump(FILE *outfile, struct gengetopt_args_info *args_info)
194     {
195     int i = 0;
196    
197     if (!outfile)
198     {
199     fprintf (stderr, "%s: cannot dump options to stream\n", CMDLINE_PARSER_PACKAGE);
200     return EXIT_FAILURE;
201     }
202    
203     if (args_info->help_given)
204     write_into_file(outfile, "help", 0, 0 );
205     if (args_info->version_given)
206     write_into_file(outfile, "version", 0, 0 );
207     if (args_info->output_given)
208     write_into_file(outfile, "output", args_info->output_orig, 0);
209     if (args_info->temperature_given)
210     write_into_file(outfile, "temperature", args_info->temperature_orig, 0);
211    
212    
213     i = EXIT_SUCCESS;
214     return i;
215     }
216    
217     int
218 gezelter 1083 cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info)
219     {
220     FILE *outfile;
221     int i = 0;
222    
223     outfile = fopen(filename, "w");
224    
225     if (!outfile)
226     {
227     fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename);
228     return EXIT_FAILURE;
229     }
230    
231 gezelter 1390 i = cmdline_parser_dump(outfile, args_info);
232 gezelter 1083 fclose (outfile);
233    
234     return i;
235     }
236    
237     void
238     cmdline_parser_free (struct gengetopt_args_info *args_info)
239     {
240     cmdline_parser_release (args_info);
241     }
242    
243 gezelter 1390 /** @brief replacement of strdup, which is not standard */
244 gezelter 1083 char *
245     gengetopt_strdup (const char *s)
246     {
247     char *result = NULL;
248     if (!s)
249     return result;
250    
251     result = (char*)malloc(strlen(s) + 1);
252     if (result == (char*)0)
253     return (char*)0;
254     strcpy(result, s);
255     return result;
256     }
257    
258     int
259     cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info)
260     {
261     return cmdline_parser2 (argc, argv, args_info, 0, 1, 1);
262     }
263    
264     int
265 gezelter 1390 cmdline_parser_ext (int argc, char * const *argv, struct gengetopt_args_info *args_info,
266     struct cmdline_parser_params *params)
267     {
268     int result;
269     result = cmdline_parser_internal (argc, argv, args_info, params, NULL);
270    
271     if (result == EXIT_FAILURE)
272     {
273     cmdline_parser_free (args_info);
274     exit (EXIT_FAILURE);
275     }
276    
277     return result;
278     }
279    
280     int
281 gezelter 1083 cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
282     {
283     int result;
284 gezelter 1390 struct cmdline_parser_params params;
285    
286     params.override = override;
287     params.initialize = initialize;
288     params.check_required = check_required;
289     params.check_ambiguity = 0;
290     params.print_errors = 1;
291 gezelter 1083
292 gezelter 1390 result = cmdline_parser_internal (argc, argv, args_info, &params, NULL);
293 gezelter 1083
294     if (result == EXIT_FAILURE)
295     {
296     cmdline_parser_free (args_info);
297     exit (EXIT_FAILURE);
298     }
299    
300     return result;
301     }
302    
303     int
304     cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name)
305     {
306     int result = EXIT_SUCCESS;
307    
308     if (cmdline_parser_required2(args_info, prog_name, NULL) > 0)
309     result = EXIT_FAILURE;
310    
311     if (result == EXIT_FAILURE)
312     {
313     cmdline_parser_free (args_info);
314     exit (EXIT_FAILURE);
315     }
316    
317     return result;
318     }
319    
320     int
321     cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error)
322     {
323     int error = 0;
324    
325     /* checks for required options */
326     if (! args_info->output_given)
327     {
328     fprintf (stderr, "%s: '--output' ('-o') option required%s\n", prog_name, (additional_error ? additional_error : ""));
329     error = 1;
330     }
331    
332     if (! args_info->temperature_given)
333     {
334     fprintf (stderr, "%s: '--temperature' ('-t') option required%s\n", prog_name, (additional_error ? additional_error : ""));
335     error = 1;
336     }
337    
338    
339     /* checks for dependences among options */
340    
341     return error;
342     }
343    
344 gezelter 1390
345     static char *package_name = 0;
346    
347     /**
348     * @brief updates an option
349     * @param field the generic pointer to the field to update
350     * @param orig_field the pointer to the orig field
351     * @param field_given the pointer to the number of occurrence of this option
352     * @param prev_given the pointer to the number of occurrence already seen
353     * @param value the argument for this option (if null no arg was specified)
354     * @param possible_values the possible values for this option (if specified)
355     * @param default_value the default value (in case the option only accepts fixed values)
356     * @param arg_type the type of this option
357     * @param check_ambiguity @see cmdline_parser_params.check_ambiguity
358     * @param override @see cmdline_parser_params.override
359     * @param no_free whether to free a possible previous value
360     * @param multiple_option whether this is a multiple option
361     * @param long_opt the corresponding long option
362     * @param short_opt the corresponding short option (or '-' if none)
363     * @param additional_error possible further error specification
364     */
365     static
366     int update_arg(void *field, char **orig_field,
367     unsigned int *field_given, unsigned int *prev_given,
368     char *value, char *possible_values[], const char *default_value,
369     cmdline_parser_arg_type arg_type,
370     int check_ambiguity, int override,
371     int no_free, int multiple_option,
372     const char *long_opt, char short_opt,
373     const char *additional_error)
374     {
375     char *stop_char = 0;
376     const char *val = value;
377     int found;
378     char **string_field;
379    
380     stop_char = 0;
381     found = 0;
382    
383     if (!multiple_option && prev_given && (*prev_given || (check_ambiguity && *field_given)))
384     {
385     if (short_opt != '-')
386     fprintf (stderr, "%s: `--%s' (`-%c') option given more than once%s\n",
387     package_name, long_opt, short_opt,
388     (additional_error ? additional_error : ""));
389     else
390     fprintf (stderr, "%s: `--%s' option given more than once%s\n",
391     package_name, long_opt,
392     (additional_error ? additional_error : ""));
393     return 1; /* failure */
394     }
395    
396    
397     if (field_given && *field_given && ! override)
398     return 0;
399     if (prev_given)
400     (*prev_given)++;
401     if (field_given)
402     (*field_given)++;
403     if (possible_values)
404     val = possible_values[found];
405    
406     switch(arg_type) {
407     case ARG_DOUBLE:
408     if (val) *((double *)field) = strtod (val, &stop_char);
409     break;
410     case ARG_STRING:
411     if (val) {
412     string_field = (char **)field;
413     if (!no_free && *string_field)
414     free (*string_field); /* free previous string */
415     *string_field = gengetopt_strdup (val);
416     }
417     break;
418     default:
419     break;
420     };
421    
422     /* check numeric conversion */
423     switch(arg_type) {
424     case ARG_DOUBLE:
425     if (val && !(stop_char && *stop_char == '\0')) {
426     fprintf(stderr, "%s: invalid numeric value: %s\n", package_name, val);
427     return 1; /* failure */
428     }
429     break;
430     default:
431     ;
432     };
433    
434     /* store the original value */
435     switch(arg_type) {
436     case ARG_NO:
437     break;
438     default:
439     if (value && orig_field) {
440     if (no_free) {
441     *orig_field = value;
442     } else {
443     if (*orig_field)
444     free (*orig_field); /* free previous string */
445     *orig_field = gengetopt_strdup (value);
446     }
447     }
448     };
449    
450     return 0; /* OK */
451     }
452    
453    
454 gezelter 1083 int
455 gezelter 1390 cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info,
456     struct cmdline_parser_params *params, const char *additional_error)
457 gezelter 1083 {
458     int c; /* Character of the parsed option. */
459    
460     int error = 0;
461     struct gengetopt_args_info local_args_info;
462 gezelter 1390
463     int override;
464     int initialize;
465     int check_required;
466     int check_ambiguity;
467    
468     package_name = argv[0];
469    
470     override = params->override;
471     initialize = params->initialize;
472     check_required = params->check_required;
473     check_ambiguity = params->check_ambiguity;
474 gezelter 1083
475     if (initialize)
476     cmdline_parser_init (args_info);
477    
478     cmdline_parser_init (&local_args_info);
479    
480     optarg = 0;
481     optind = 0;
482 gezelter 1390 opterr = params->print_errors;
483 gezelter 1083 optopt = '?';
484    
485     while (1)
486     {
487     int option_index = 0;
488    
489     static struct option long_options[] = {
490     { "help", 0, NULL, 'h' },
491     { "version", 0, NULL, 'V' },
492     { "output", 1, NULL, 'o' },
493     { "temperature", 1, NULL, 't' },
494     { NULL, 0, NULL, 0 }
495     };
496    
497     c = getopt_long (argc, argv, "hVo:t:", long_options, &option_index);
498    
499     if (c == -1) break; /* Exit from `while (1)' loop. */
500    
501     switch (c)
502     {
503     case 'h': /* Print help and exit. */
504     cmdline_parser_print_help ();
505     cmdline_parser_free (&local_args_info);
506     exit (EXIT_SUCCESS);
507    
508     case 'V': /* Print version and exit. */
509     cmdline_parser_print_version ();
510     cmdline_parser_free (&local_args_info);
511     exit (EXIT_SUCCESS);
512    
513     case 'o': /* Output file name. */
514 gezelter 1390
515    
516     if (update_arg( (void *)&(args_info->output_arg),
517     &(args_info->output_orig), &(args_info->output_given),
518     &(local_args_info.output_given), optarg, 0, 0, ARG_STRING,
519     check_ambiguity, override, 0, 0,
520     "output", 'o',
521     additional_error))
522     goto failure;
523    
524 gezelter 1083 break;
525     case 't': /* temperature (K). */
526 gezelter 1390
527    
528     if (update_arg( (void *)&(args_info->temperature_arg),
529     &(args_info->temperature_orig), &(args_info->temperature_given),
530     &(local_args_info.temperature_given), optarg, 0, 0, ARG_DOUBLE,
531     check_ambiguity, override, 0, 0,
532     "temperature", 't',
533     additional_error))
534 gezelter 1083 goto failure;
535 gezelter 1390
536 gezelter 1083 break;
537    
538     case 0: /* Long option with no short option */
539     case '?': /* Invalid option. */
540     /* `getopt_long' already printed an error message. */
541     goto failure;
542    
543     default: /* bug: option not considered. */
544     fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : ""));
545     abort ();
546     } /* switch */
547     } /* while */
548    
549    
550    
551     if (check_required)
552     {
553     error += cmdline_parser_required2 (args_info, argv[0], additional_error);
554     }
555    
556     cmdline_parser_release (&local_args_info);
557    
558     if ( error )
559     return (EXIT_FAILURE);
560    
561     if (optind < argc)
562     {
563     int i = 0 ;
564     int found_prog_name = 0;
565     /* whether program name, i.e., argv[0], is in the remaining args
566     (this may happen with some implementations of getopt,
567     but surely not with the one included by gengetopt) */
568    
569     i = optind;
570     while (i < argc)
571     if (argv[i++] == argv[0]) {
572     found_prog_name = 1;
573     break;
574     }
575     i = 0;
576    
577     args_info->inputs_num = argc - optind - found_prog_name;
578     args_info->inputs =
579     (char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ;
580     while (optind < argc)
581     if (argv[optind++] != argv[0])
582     args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind-1]) ;
583     }
584    
585     return 0;
586    
587     failure:
588    
589     cmdline_parser_release (&local_args_info);
590     return (EXIT_FAILURE);
591     }

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