Replacing most of the C-code with C++ code, and migrating the config.h file into the PROJECT_BINARY_DIR so that we can have multiple builds on the same architecture.
updating gengetopt runs
Creating busticated version of OpenMD
Adding property set to svn entries
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
bug fixes for vacancies
Changed nanoparticle builder for new dump syntax.
Added code for nanoparticle builder to cvs.
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