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Revision 1562 - Directory Listing - [select for diffs]
Modified Thu May 12 17:00:14 2011 UTC (14 years ago) by gezelter
Diff to previous 1465 
changes for cell linked lists
Revision 1465 - Directory Listing - [select for diffs]
Modified Fri Jul 9 23:08:25 2010 UTC (14 years, 10 months ago) by chuckv
Diff to previous 1442 
Creating busticated version of OpenMD
Revision 1442 - Directory Listing - [select for diffs]
Modified Mon May 10 17:28:26 2010 UTC (15 years ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1390 
Adding property set to svn entries
Revision 1390 - Directory Listing - [select for diffs]
Modified Wed Nov 25 20:02:06 2009 UTC (15 years, 5 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1322 
Almost all of the changes necessary to create OpenMD out of our old
project (OOPSE-4)
Revision 1322 - Directory Listing - [select for diffs]
Modified Mon Nov 24 22:01:56 2008 UTC (16 years, 5 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1210 
use the viscoConvert in OOPSEConstant
Revision 1210 - Directory Listing - [select for diffs]
Modified Wed Jan 23 03:45:33 2008 UTC (17 years, 3 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1208 
Removed older version of openbabel from our code.  We now have a
configure check to see if openbabel is installed and then we link to
the stuff we need.  Conversion to OOPSE's md format is handled by only
one application (atom2md), so most of the work went on there.
ElementsTable still needs some work to function in parallel.
Revision 1208 - Directory Listing - [select for diffs]
Modified Wed Jan 16 20:19:28 2008 UTC (17 years, 4 months ago) by xsun
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1177 
Changes to do hydrodynamics modeling and to explain a diff file
Revision 1177 - Directory Listing - [select for diffs]
Modified Tue Aug 14 17:40:33 2007 UTC (17 years, 9 months ago) by xsun
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 1027 
Bug fixes for non-declared objects
Revision 1027 - Directory Listing - [select for diffs]
Modified Wed Aug 30 21:13:57 2006 UTC (18 years, 8 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 981 
removed extra file in Hydro.cpp
Revision 981 - Directory Listing - [select for diffs]
Modified Mon Jun 5 18:24:45 2006 UTC (18 years, 11 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 978 
Massive changes for GB code with multiple ellipsoid types (a la
Cleaver's paper).

Also, changes in hydrodynamics code to make HydroProp a somewhat
smarter class (rather than just a struct).
Revision 978 - Directory Listing - [select for diffs]
Modified Thu May 25 17:02:00 2006 UTC (18 years, 11 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 977 
Fix a type promotion problem
Revision 977 - Directory Listing - [select for diffs]
Modified Thu May 25 16:27:27 2006 UTC (18 years, 11 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 972 
replace double with RealType
Revision 972 - Directory Listing - [select for diffs]
Modified Wed May 24 18:31:12 2006 UTC (18 years, 11 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 963 
fixes for Hydrodynamics
Revision 963 - Directory Listing - [select for diffs]
Modified Wed May 17 21:51:42 2006 UTC (19 years ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 956 
Adding single precision capabilities to c++ side
Revision 956 - Directory Listing - [select for diffs]
Modified Tue May 16 02:06:37 2006 UTC (19 years ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 954 
*** empty log message ***
Revision 954 - Directory Listing - [select for diffs]
Modified Wed May 10 01:44:48 2006 UTC (19 years ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 946 
adding a gay-berne switch to Dump2XYZ
Revision 946 - Directory Listing - [select for diffs]
Modified Tue Apr 25 13:35:42 2006 UTC (19 years ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 945 
Using OpenBabel element table to pick vdw radii for hydrodynamics
if the LJ sigma can't be found.
Revision 945 - Directory Listing - [select for diffs]
Modified Tue Apr 25 02:09:01 2006 UTC (19 years ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 944 
Adding spherical boundary conditions to LD integrator
Revision 944 - Directory Listing - [select for diffs]
Modified Tue Apr 25 02:06:12 2006 UTC (19 years ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 938 
Added EAM atom types to Hydro models
Revision 938 - Directory Listing - [select for diffs]
Modified Mon Apr 17 21:49:12 2006 UTC (19 years, 1 month ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 921 
Many performance improvements
Revision 921 - Directory Listing - [select for diffs]
Modified Wed Mar 29 18:09:26 2006 UTC (19 years, 1 month ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 915 
(1) RoughShell Model is working; (20)Adding a new option into Hydro which allows user to generate the beads only
Revision 915 - Directory Listing - [select for diffs]
Modified Thu Mar 23 15:03:33 2006 UTC (19 years, 1 month ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 910 
update writeBeads method
Revision 910 - Directory Listing - [select for diffs]
Modified Tue Mar 21 15:33:04 2006 UTC (19 years, 1 month ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 909 
fix a bug in calculating hydrodynamics tensor when the radius of beads are not the same
Revision 909 - Directory Listing - [select for diffs]
Modified Tue Mar 21 00:26:55 2006 UTC (19 years, 1 month ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 908 
Fix a bug in friction calculation for ellipsoid
Revision 908 - Directory Listing - [select for diffs]
Modified Mon Mar 20 19:12:14 2006 UTC (19 years, 1 month ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 907 
Verify the correctness of Ellipsoid's hydrodynamics properties
Revision 907 - Directory Listing - [select for diffs]
Modified Fri Mar 17 23:51:54 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 906 
New version of Hydro is working now.
Revision 906 - Directory Listing - [select for diffs]
Modified Fri Mar 17 23:20:35 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 904 
refactor Hydrodynamics module.
Revision 904 - Directory Listing - [select for diffs]
Modified Thu Mar 16 22:50:48 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 903 
LagevinDynamics is working?
Revision 903 - Directory Listing - [select for diffs]
Modified Thu Mar 16 21:52:23 2006 UTC (19 years, 2 months ago) by gezelter
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 902 
fixed a const problem
Revision 902 - Directory Listing - [select for diffs]
Modified Wed Mar 15 22:08:25 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 901 
unit conversion for diffusion tensor is wrong
Revision 901 - Directory Listing - [select for diffs]
Modified Wed Mar 15 21:28:49 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 900 
change the epsilon of numeric_limit
Revision 900 - Directory Listing - [select for diffs]
Modified Wed Mar 15 20:58:47 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 898 
correcting the unit in HydrodynamicsModel
Revision 898 - Directory Listing - [select for diffs]
Modified Wed Mar 15 15:51:44 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 897 
Adding RoughShell and BeadModel
Revision 897 - Directory Listing - [select for diffs]
Modified Wed Mar 15 15:50:11 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 895 
adding hydrodynamics module into build system
Revision 895 - Directory Listing - [select for diffs]
Modified Mon Mar 13 22:42:40 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 893 
LangevinDynamics in progress
Revision 893 - Directory Listing - [select for diffs]
Modified Fri Feb 24 21:17:05 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 892 
fix bugs in HydrodynamicsModel; (1) sign issue of Xirr calculation (2) out product of Rij
Revision 892 - Directory Listing - [select for diffs]
Modified Thu Feb 23 23:16:43 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics
Diff to previous 891 
Bead Model is working
Revision 891 - Directory Listing - [select for diffs]
Added Wed Feb 22 20:35:16 2006 UTC (19 years, 2 months ago) by tim
Original Path: trunk/src/applications/hydrodynamics 
Adding Hydrodynamics Module

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