Fixed a bunch of cppcheck warnings.
Various fixes required to compile OpenMD with the MS Visual C++ compiler
Some fixes for CMake and single precision builds
fixing the build system
Creating busticated version of OpenMD
Adding property set to svn entries
fixing atom2md and bringing it up to speed with OpenBabel 2.2.3
Parallel bugfix in RestraintForceManager Reverted back to hydrodynamics on triangular plates for SMIPDForceManager Removed thermalLength and thermalConductivity keywords from Globals. Bug tracking in openmdformat (not yet resolved).
more changes to fix build process and divorce ourselves from CVS
Merging changes skipped in working copies of OOPSE into the OpenMD tree, fixing make install
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
Inversion fixes and amber mostly working
Changes for implementing Amber force field: Added Inversions and worked on BaseAtomTypes so that they'd function with the fortran side.
Cleaning up oopseformat and adding inversion terms
Adding infrastructure for Amber force field.
Removed older version of openbabel from our code. We now have a configure check to see if openbabel is installed and then we link to the stuff we need. Conversion to OOPSE's md format is handled by only one application (atom2md), so most of the work went on there. ElementsTable still needs some work to function in parallel.
starting change of file formats
Changing atom2mdin into atom2md to reflect new unified file format