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root/OpenMD/branches/development/samples/fluctuating/tip4p/2waterFQ.md
Revision: 1871
Committed: Fri May 10 14:59:13 2013 UTC (12 years ago) by gezelter
File size: 1546 byte(s)
Log Message:
Bugs in the FQ samples, fixed for Dump2XYZ to print out charges and electric fields

File Contents

# User Rev Content
1 gezelter 1751 <OpenMD version=1>
2     <MetaData>
3    
4     molecule {
5     name = "TIP4P_FQ";
6    
7     atom[0]{
8     type = "O_TIP4P_FQ";
9 gezelter 1870 position( 0.0, 0.0, -0.06556 );
10 gezelter 1751 }
11     atom[1]{
12     type = "H_TIP4P_FQ";
13     position( 0.0, 0.75695, 0.52032 );
14     }
15     atom[2]{
16     type = "H_TIP4P_FQ";
17     position( 0.0, -0.75695, 0.52032 );
18     }
19     atom[3]{
20     type = "M_TIP4P_FQ";
21     position( 0.0, 0.0, 0.08444 );
22     }
23    
24     rigidBody[0]{
25     members(0,1,2,3);
26     }
27 gezelter 1870 constrainTotalCharge = true;
28 gezelter 1751 }
29     component{
30     type = "TIP4P_FQ";
31     nMol = 2;
32     }
33    
34 gezelter 1870 statFileFormat = "TIME|TOTAL_ENERGY|POTENTIAL_ENERGY|KINETIC_ENERGY|TEMPERATURE|PRESSURE|VOLUME|CONSERVED_QUANTITY|ELECTRONIC_TEMPERATURE";
35 gezelter 1751 ensemble = NVE;
36     forceField = "FlucQ";
37     forceFieldFileName = "FQ.frc";
38     cutoffMethod = "shifted_force";
39     cutoffRadius = 9.0;
40     outputFluctuatingCharges = true;
41    
42 gezelter 1761 flucQ {
43     targetTemp = 1.0;
44 gezelter 1871 tauThermostat = 100.0;
45 gezelter 1761 }
46    
47    
48 gezelter 1766 dt = 0.1;
49 gezelter 1751 runTime = 1e4;
50     useInitialTime = "false";
51     useInitialExtendedSystemState = "false";
52    
53 gezelter 1766 sampleTime = 1;
54     statusTime = 1;
55 gezelter 1751 </MetaData>
56     <Snapshot>
57     <FrameData>
58     Time: 20000
59     Hmat: {{ 19.713, 0, 0 }, { 0, 19.713, 0 }, { 0, 0, 19.713 }}
60     </FrameData>
61     <StuntDoubles>
62     0 pvqj 0.0 0.0 0.0 -9.930000e-04 -2.397000e-03 -1.573000e-03 5.072750e-01 -7.075410e-01 3.148250e-01 -3.780790e-01 1.549000e-03 3.620000e-03 1.009100e-02
63     1 pvqj 5.0 0.0 0.0 -2.782000e-03 -6.600000e-04 4.056000e-03 9.326000e-03 1.858280e-01 -9.793550e-01 -7.903000e-02 -6.290000e-04 -1.134100e-02 -1.901100e-02
64     </StuntDoubles>
65     </Snapshot>
66     </OpenMD>