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root/OpenMD/branches/development/samples/builders/runMe
Revision: 1067
Committed: Tue Oct 10 18:34:12 2006 UTC (18 years, 8 months ago) by gezelter
Original Path: trunk/samples/builders/runMe
File size: 1549 byte(s)
Log Message:
fixing missing lattice arguments, adding a builder sample

File Contents

# Content
1 #!/bin/sh
2 #
3 # This is a collection of sample commands that can be used to build
4 # OOPSE 4 start files. In OOPSE 4, the start files have a <MetaData>
5 # block to give information about the kind of simulation being performed.
6 # The start files also contain at least one <Snapshot> block which contains
7 # information about the instantaneous configuration.
8 #
9 # One of the difficult tasks in using any simulation program is figuring
10 # out how to format the start file correctly. OOPSE includes a set of
11 # "builder" programs to make that process a bit less painful.
12 #
13 # Example 1:
14 # Builds an FCC lattice from the <MetaData> block in one_component.md
15 # Uses 5 unit cells in each direction, a density of 1.0 g / cm^3, and
16 # places the output (which can be used to start an OOPSE job) in
17 # FCC.md
18 #
19 # Note that builders will rewrite the number of molecules in each component
20 # to match the number of lattice sites.
21 #
22 ../../bin/simpleBuilder -o FCC.md --nx=5 --ny=5 --nz=5 --density=1.0 one_component.md
23 #
24 # Example 2:
25 # Builds an FCC lattice from the <MetaData> block in three_component.md
26 # uses 4 unit cells in each direction, a density of 1.0 g / cm^3, and
27 # molFractions of 0.4, 0.4, and 0.2 for the three components. Places
28 # the output (which can be used to start an OOPSE job) in random_FCC.md
29 #
30 # Note that builders will rewrite the number of molecules in each component
31 # to match the number of lattice sites.
32 #
33 ../../bin/randomBuilder -o random_FCC.md --nx=4 --ny=4 --nz=4 --density=1.0 --molFraction=0.4 --molFraction=0.4 three_component.md