MERGE OpenMD trunk changes 1803:1811 into development branch
removing cruft from build system
Bug squashing
More modifications for paralllel rewrite
Creating busticated version of OpenMD
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
Fixes for Torsions and Inversions, Amber is mostly working now.
fixed a bug where the pressure tensor wouldn't update for atoms in the switching region when # of atoms in a group = 1
fixed a few bugs
converted samples over to the OOPSE-4 file format Fixed an MPI bug in thermodynamic integration
splined up sticky
Many performance improvements
added a cubic spline to switcheroo
remove deprecated keywords from samples
just playing around - we need to refresh all the samples sometime soon...
playing with switching functions
Equilibrated the sample
Import of OOPSE v. 2.0
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