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root/OpenMD/branches/development/forceFields/Amber.99.frc
Revision: 1701
Committed: Thu Apr 5 19:37:58 2012 UTC (13 years, 1 month ago) by kstocke1
File size: 101489 byte(s)
Log Message:
Added files for fcc and pentagonal nanorod builders. Updated runMe in samples/builders to include nanorod builders.

File Contents

# User Rev Content
1 gezelter 1270 // This is the forcefield file generated from amber99.prm
2     //
3     // The sections are divided into AtomTypes
4     //
5    
6    
7     begin BaseAtomTypes
8     //number name mass (amu)
9     CT 12.01
10     C 12.01
11     CA 12.01
12     CM 12.01
13     CC 12.01
14     CV 12.01
15     CW 12.01
16     CR 12.01
17     CB 12.01
18     C* 12.01
19     CN 12.01
20     CK 12.01
21     CQ 12.01
22     N 14.01
23     NA 14.01
24     NB 14.01
25     NC 14.01
26     N* 14.01
27     N2 14.01
28     N3 14.01
29     OW 16.0
30     OH 16.0
31     OS 16.0
32     O 16.0
33     O2 16.0
34     S 32.06
35     SH 32.06
36     P 30.97
37     H 1.008
38     HW 1.008
39     HO 1.008
40     HS 1.008
41     HA 1.008
42     HC 1.008
43     H1 1.008
44     H2 1.008
45     H3 1.008
46     HP 1.008
47     H4 1.008
48     H5 1.008
49     Li+ 6.940
50     Na+ 22.990
51     K+ 39.100
52     Rb+ 85.470
53     Cs+ 132.910
54     Mg+ 24.305
55     Ca+ 40.080
56     Zn+ 65.400
57     Cl- 35.450
58 gezelter 1363 EP 0.0
59 gezelter 1270 end BaseAtomTypes
60    
61    
62     begin AtomTypes
63     //name baseatomtype
64     GLY-N N
65     GLY-CA CT
66     GLY-C C
67     GLY-HN H
68     GLY-O O
69     GLY-HA H1
70     ALA-N N
71     ALA-CA CT
72     ALA-C C
73     ALA-HN H
74     ALA-O O
75     ALA-HA H1
76     ALA-CB CT
77     ALA-HB HC
78     VAL-N N
79     VAL-CA CT
80     VAL-C C
81     VAL-HN H
82     VAL-O O
83     VAL-HA H1
84     VAL-CB CT
85     VAL-HB HC
86     VAL-CG1 CT
87     VAL-HG1 HC
88     VAL-CG2 CT
89     VAL-HG2 HC
90     LEU-N N
91     LEU-CA CT
92     LEU-C C
93     LEU-HN H
94     LEU-O O
95     LEU-HA H1
96     LEU-CB CT
97     LEU-HB HC
98     LEU-CG CT
99     LEU-HG HC
100     LEU-CD1 CT
101     LEU-HD1 HC
102     LEU-CD2 CT
103     LEU-HD2 HC
104     ILE-N N
105     ILE-CA CT
106     ILE-C C
107     ILE-HN H
108     ILE-O O
109     ILE-HA H1
110     ILE-CB CT
111     ILE-HB HC
112     ILE-CG1 CT
113     ILE-HG1 HC
114     ILE-CG2 CT
115     ILE-HG2 HC
116     ILE-CD CT
117     ILE-HD HC
118     SER-N N
119     SER-CA CT
120     SER-C C
121     SER-HN H
122     SER-O O
123     SER-HA H1
124     SER-CB CT
125     SER-HB H1
126     SER-OG OH
127     SER-HG HO
128     THR-N N
129     THR-CA CT
130     THR-C C
131     THR-HN H
132     THR-O O
133     THR-HA H1
134     THR-CB CT
135     THR-HB H1
136     THR-OG1 OH
137     THR-HG1 HO
138     THR-CG2 CT
139     THR-HG2 HC
140     CYS-N N
141     CYS-CA CT
142     CYS-C C
143     CYS-HN H
144     CYS-O O
145     CYS-HA H1
146     CYS-CB CT
147     CYS-HB H1
148     CYS-SG SH
149     CYS-HG HS
150     CYX-N N
151     CYX-CA CT
152     CYX-C C
153     CYX-HN H
154     CYX-O O
155     CYX-HA H1
156     CYX-CB CT
157     CYX-HB H1
158     CYX-SG S
159     PRO-N N
160     PRO-CA CT
161     PRO-C C
162     PRO-O O
163     PRO-HA H1
164     PRO-CB CT
165     PRO-HB HC
166     PRO-CG CT
167     PRO-HG HC
168     PRO-CD CT
169     PRO-HD H1
170     PHE-N N
171     PHE-CA CT
172     PHE-C C
173     PHE-HN H
174     PHE-O O
175     PHE-HA H1
176     PHE-CB CT
177     PHE-HB HC
178     PHE-CG CA
179     PHE-CD CA
180     PHE-HD HA
181     PHE-CE CA
182     PHE-HE HA
183     PHE-CZ CA
184     PHE-HZ HA
185     TYR-N N
186     TYR-CA CT
187     TYR-C C
188     TYR-HN H
189     TYR-O O
190     TYR-HA H1
191     TYR-CB CT
192     TYR-HB HC
193     TYR-CG CA
194     TYR-CD CA
195     TYR-HD HA
196     TYR-CE CA
197     TYR-HE HA
198     TYR-CZ CA
199     TYR-OH OH
200     TYR-HH HO
201     TRP-N N
202     TRP-CA CT
203     TRP-C C
204     TRP-HN H
205     TRP-O O
206     TRP-HA H1
207     TRP-CB CT
208     TRP-HB HC
209     TRP-CG C*
210     TRP-CD1 CW
211     TRP-HD1 H4
212     TRP-CD2 CB
213     TRP-NE1 NA
214     TRP-HE1 H
215     TRP-CE2 CN
216     TRP-CE3 CA
217     TRP-HE3 HA
218     TRP-CZ2 CA
219     TRP-HZ2 HA
220     TRP-CZ3 CA
221     TRP-HZ3 HA
222     TRP-CH2 CA
223     TRP-HH2 HA
224     HIS-N N
225     HIS-CA CT
226     HIS-C C
227     HIS-HN H
228     HIS-O O
229     HIS-HA H1
230     HIS-CB CT
231     HIS-HB HC
232     HIS-CG CC
233     HIS-ND1 NA
234     HIS-HD1 H
235     HIS-CD2 CW
236     HIS-HD2 H4
237     HIS-CE1 CR
238     HIS-HE1 H5
239     HIS-NE2 NA
240     HIS-HE2 H
241     HID-N N
242     HID-CA CT
243     HID-C C
244     HID-HN H
245     HID-O O
246     HID-HA H1
247     HID-CB CT
248     HID-HB HC
249     HID-CG CC
250     HID-ND1 NA
251     HID-HD1 H
252     HID-CD2 CV
253     HID-HD2 H4
254     HID-CE1 CR
255     HID-HE1 H5
256     HID-NE2 NB
257     HIE-N N
258     HIE-CA CT
259     HIE-C C
260     HIE-HN H
261     HIE-O O
262     HIE-HA H1
263     HIE-CB CT
264     HIE-HB HC
265     HIE-CG CC
266     HIE-ND1 NB
267     HIE-CD2 CW
268     HIE-HD2 H4
269     HIE-CE1 CR
270     HIE-HE1 H5
271     HIE-NE2 NA
272     HIE-HE2 H
273     ASP-N N
274     ASP-CA CT
275     ASP-C C
276     ASP-HN H
277     ASP-O O
278     ASP-HA H1
279     ASP-CB CT
280     ASP-HB HC
281     ASP-CG C
282     ASP-OD O2
283     ASN-N N
284     ASN-CA CT
285     ASN-C C
286     ASN-HN H
287     ASN-O O
288     ASN-HA H1
289     ASN-CB CT
290     ASN-HB HC
291     ASN-CG C
292     ASN-OD1 O
293     ASN-ND2 N
294     ASN-HD2 H
295     GLU-N N
296     GLU-CA CT
297     GLU-C C
298     GLU-HN H
299     GLU-O O
300     GLU-HA H1
301     GLU-CB CT
302     GLU-HB HC
303     GLU-CG CT
304     GLU-HG HC
305     GLU-CD C
306     GLU-OE O2
307     GLN-N N
308     GLN-CA CT
309     GLN-C C
310     GLN-HN H
311     GLN-O O
312     GLN-HA H1
313     GLN-CB CT
314     GLN-HB HC
315     GLN-CG CT
316     GLN-HG HC
317     GLN-CD C
318     GLN-OE1 O
319     GLN-NE2 N
320     GLN-HE2 H
321     MET-N N
322     MET-CA CT
323     MET-C C
324     MET-HN H
325     MET-O O
326     MET-HA H1
327     MET-CB CT
328     MET-HB HC
329     MET-CG CT
330     MET-HG H1
331     MET-SD S
332     MET-CE CT
333     MET-HE H1
334     LYS-N N
335     LYS-CA CT
336     LYS-C C
337     LYS-HN H
338     LYS-O O
339     LYS-HA H1
340     LYS-CB CT
341     LYS-HB HC
342     LYS-CG CT
343     LYS-HG HC
344     LYS-CD CT
345     LYS-HD HC
346     LYS-CE CT
347     LYS-HE HP
348     LYS-NZ N3
349     LYS-HZ H
350     ARG-N N
351     ARG-CA CT
352     ARG-C C
353     ARG-HN H
354     ARG-O O
355     ARG-HA H1
356     ARG-CB CT
357     ARG-HB HC
358     ARG-CG CT
359     ARG-HG HC
360     ARG-CD CT
361     ARG-HD H1
362     ARG-NE N2
363     ARG-HE H
364     ARG-CZ CA
365     ARG-NH N2
366     ARG-HH H
367     ORN-N N
368     ORN-CA CT
369     ORN-C C
370     ORN-HN H
371     ORN-O O
372     ORN-HA H1
373     ORN-CB CT
374     ORN-HB HC
375     ORN-CG CT
376     ORN-HG HC
377     ORN-CD CT
378     ORN-HD HP
379     ORN-NE N3
380     ORN-HE H
381     MAA-N N
382     MAA-CA CT
383     MAA-C C
384     MAA-HN H
385     MAA-O O
386     MAA-CB CT
387     MAA-HB HC
388     PCA-N N
389     PCA-CA CT
390     PCA-C C
391     PCA-HN H
392     PCA-O O
393     PCA-HA H1
394     PCA-CB CT
395     PCA-HB HC
396     PCA-CG CT
397     PCA-HG HC
398     PCA-CD C
399     PCA-OE O
400     FOR-C C
401     FOR-H H
402     FOR-O O
403     ACE-CA CT
404     ACE-HA HC
405     ACE-C C
406     ACE-O O
407     C-Term N
408     C-Term H
409     N-MeAmide N
410     N-MeAmide H
411     N-MeAmide CT
412     N-MeAmide H1
413     NGLY-N N3
414     NGLY-CA CT
415     NGLY-C C
416     NGLY-HN H
417     NGLY-O O
418     NGLY-HA H1
419     NALA-N N3
420     NALA-CA CT
421     NALA-C C
422     NALA-HN H
423     NALA-O O
424     NALA-HA H1
425     NVAL-N N3
426     NVAL-CA CT
427     NVAL-C C
428     NVAL-HN H
429     NVAL-O O
430     NVAL-HA H1
431     NLEU-N N3
432     NLEU-CA CT
433     NLEU-C C
434     NLEU-HN H
435     NLEU-O O
436     NLEU-HA H1
437     NILE-N N3
438     NILE-CA CT
439     NILE-C C
440     NILE-HN H
441     NILE-O O
442     NILE-HA H1
443     NSER-N N3
444     NSER-CA CT
445     NSER-C C
446     NSER-HN H
447     NSER-O O
448     NSER-HA H1
449     NTHR-N N3
450     NTHR-CA CT
451     NTHR-C C
452     NTHR-HN H
453     NTHR-O O
454     NTHR-HA H1
455     NCYS-N N3
456     NCYS-CA CT
457     NCYS-C C
458     NCYS-HN H
459     NCYS-O O
460     NCYS-HA H1
461     NCYX-N N3
462     NCYX-CA CT
463     NCYX-C C
464     NCYX-HN H
465     NCYX-O O
466     NCYX-HA H1
467     NPRO-N N3
468     NPRO-CA CT
469     NPRO-C C
470     NPRO-HN H
471     NPRO-O O
472     NPRO-HA H1
473     NPRO-CD CT
474     NPRO-HD HP
475     NPHE-N N3
476     NPHE-CA CT
477     NPHE-C C
478     NPHE-HN H
479     NPHE-O O
480     NPHE-HA H1
481     NTYR-N N3
482     NTYR-CA CT
483     NTYR-C C
484     NTYR-HN H
485     NTYR-O O
486     NTYR-HA H1
487     NTRP-N N3
488     NTRP-CA CT
489     NTRP-C C
490     NTRP-HN H
491     NTRP-O O
492     NTRP-HA H1
493     NHIS-N N3
494     NHIS-CA CT
495     NHIS-C C
496     NHIS-HN H
497     NHIS-O O
498     NHIS-HA H1
499     NHID-N N3
500     NHID-CA CT
501     NHID-C C
502     NHID-HN H
503     NHID-O O
504     NHID-HA H1
505     NHIE-N N3
506     NHIE-CA CT
507     NHIE-C C
508     NHIE-HN H
509     NHIE-O O
510     NHIE-HA H1
511     NASP-N N3
512     NASP-CA CT
513     NASP-C C
514     NASP-HN H
515     NASP-O O
516     NASP-HA H1
517     NASN-N N3
518     NASN-CA CT
519     NASN-C C
520     NASN-HN H
521     NASN-O O
522     NASN-HA H1
523     NGLU-N N3
524     NGLU-CA CT
525     NGLU-C C
526     NGLU-HN H
527     NGLU-O O
528     NGLU-HA H1
529     NCLN-N N3
530     NCLN-CA CT
531     NCLN-C C
532     NCLN-HN H
533     NCLN-O O
534     NCLN-HA H1
535     NMET-N N3
536     NMET-CA CT
537     NMET-C C
538     NMET-HN H
539     NMET-O O
540     NMET-HA H1
541     NLYS-N N3
542     NLYS-CA CT
543     NLYS-C C
544     NLYS-HN H
545     NLYS-O O
546     NLYS-HA H1
547     NARG-N N3
548     NARG-CA CT
549     NARG-C C
550     NARG-HN H
551     NARG-O O
552     NARG-HA H1
553     NORN-N N3
554     NORN-CA CT
555     NORN-C C
556     NORN-HN H
557     NORN-O O
558     NORN-HA H1
559     NAIB-N N3
560     NAIB-CA CT
561     NAIB-C C
562     NAIB-HN H
563     NAIB-O O
564     CGLY-N N
565     CGLY-CA CT
566     CGLY-C C
567     CGLY-HN H
568     CGLY-OXT O2
569     CGLY-HA H1
570     CALA-N N
571     CALA-CA CT
572     CALA-C C
573     CALA-HN H
574     CALA-OXT O2
575     CALA-HA H1
576     CVAL-N N
577     CVAL-CA CT
578     CVAL-C C
579     CVAL-HN H
580     CVAL-OXT O2
581     CVAL-HA H1
582     CLEU-N N
583     CLEU-CA CT
584     CLEU-C C
585     CLEU-HN H
586     CLEU-OXT O2
587     CLEU-HA H1
588     CILE-N N
589     CILE-CA CT
590     CILE-C C
591     CILE-HN H
592     CILE-OXT O2
593     CILE-HA H1
594     CSER-N N
595     CSER-CA CT
596     CSER-C C
597     CSER-HN H
598     CSER-OXT O2
599     CSER-HA H1
600     CTHR-N N
601     CTHR-CA CT
602     CTHR-C C
603     CTHR-HN H
604     CTHR-OXT O2
605     CTHR-HA H1
606     CCYS-N N
607     CCYS-CA CT
608     CCYS-C C
609     CCYS-HN H
610     CCYS-OXT O2
611     CCYS-HA H1
612     CCYX-N N
613     CCYX-CA CT
614     CCYX-C C
615     CCYX-HN H
616     CCYX-OXT O2
617     CCYX-HA H1
618     CPRO-N N
619     CPRO-CA CT
620     CPRO-C C
621     CPRO-OXT O2
622     CPRO-HA H1
623     CPHE-N N
624     CPHE-CA CT
625     CPHE-C C
626     CPHE-HN H
627     CPHE-OXT O2
628     CPHE-HA H1
629     CTYR-N N
630     CTYR-CA CT
631     CTYR-C C
632     CTYR-HN H
633     CTYR-OXT O2
634     CTYR-HA H1
635     CTRP-N N
636     CTRP-CA CT
637     CTRP-C C
638     CTRP-HN H
639     CTRP-OXT O2
640     CTRP-HA H1
641     CHIS-N N
642     CHIS-CA CT
643     CHIS-C C
644     CHIS-HN H
645     CHIS-OXT O2
646     CHIS-HA H1
647     CHID-N N
648     CHID-CA CT
649     CHID-C C
650     CHID-HN H
651     CHID-OXT O2
652     CHID-HA H1
653     CHIE-N N
654     CHIE-CA CT
655     CHIE-C C
656     CHIE-HN H
657     CHIE-OXT O2
658     CHIE-HA H1
659     CASP-N N
660     CASP-CA CT
661     CASP-C C
662     CASP-HN H
663     CASP-OXT O2
664     CASP-HA H1
665     CASN-N N
666     CASN-CA CT
667     CASN-C C
668     CASN-HN H
669     CASN-OXT O2
670     CASN-HA H1
671     CGLU-N N
672     CGLU-CA CT
673     CGLU-C C
674     CGLU-HN H
675     CGLU-OXT O2
676     CGLU-HA H1
677     CGLN-N N
678     CGLN-CA CT
679     CGLN-C C
680     CGLN-HN H
681     CGLN-OXT O2
682     CGLN-HA H1
683     CMET-N N
684     CMET-CA CT
685     CMET-C C
686     CMET-HN H
687     CMET-OXT O2
688     CMET-HA H1
689     CLYS-N N
690     CLYS-CA CT
691     CLYS-C C
692     CLYS-HN H
693     CLYS-OXT O2
694     CLYS-HA H1
695     CARG-N N
696     CARG-CA CT
697     CARG-C C
698     CARG-HN H
699     CARG-OXT O2
700     CARG-HA H1
701     CORN-N N
702     CORN-CA CT
703     CORN-C C
704     CORN-HN H
705     CORN-OXT O2
706     CORN-HA H1
707     CAIB-N N
708     CAIB-CA CT
709     CAIB-C C
710     CAIB-HN H
711     CAIB-OXT O2
712     RA-O5' OS
713     RA-C5' CT
714     RA-H5'1 H1
715     RA-H5'2 H1
716     RA-C4' CT
717     RA-H4' H1
718     RA-O4' OS
719     RA-C1' CT
720     RA-H1' H2
721     RA-C3' CT
722     RA-H3' H1
723     RA-C2' CT
724     RA-H2'1 H1
725     RA-O2' OH
726     RA-HO'2 HO
727     RA-O3' OS
728     RA-N9 N*
729     RA-C4 CB
730     RA-C5 CB
731     RA-N7 NB
732     RA-C8 CK
733     RA-N3 NC
734     RA-C2 CQ
735     RA-N1 NC
736     RA-C6 CA
737     RA-H2 H5
738     RA-N6 N2
739     RA-H61 H
740     RA-H62 H
741     RA-H8 H5
742     RG-O5' OS
743     RG-C5' CT
744     RG-H5'1 H1
745     RG-H5'2 H1
746     RG-C4' CT
747     RG-H4' H1
748     RG-O4' OS
749     RG-C1' CT
750     RG-H1' H2
751     RG-C3' CT
752     RG-H3' H1
753     RG-C2' CT
754     RG-H2'1 H1
755     RG-O2' OH
756     RG-HO'2 HO
757     RG-O3' OS
758     RG-N9 N*
759     RG-C4 CB
760     RG-C5 CB
761     RG-N7 NB
762     RG-C8 CK
763     RG-N3 NC
764     RG-C2 CA
765     RG-N1 NA
766     RG-C6 C
767     RG-H1 H
768     RG-N2 N2
769     RG-H21 H
770     RG-H22 H
771     RG-O6 O
772     RG-H8 H5
773     RC-O5' OS
774     RC-C5' CT
775     RC-H5'1 H1
776     RC-H5'2 H1
777     RC-C4' CT
778     RC-H4' H1
779     RC-O4' OS
780     RC-C1' CT
781     RC-H1' H2
782     RC-C3' CT
783     RC-H3' H1
784     RC-C2' CT
785     RC-H2'1 H1
786     RC-O2' OH
787     RC-HO'2 HO
788     RC-O3' OS
789     RC-N1 N*
790     RC-C2 C
791     RC-N3 NC
792     RC-C4 CA
793     RC-C5 CM
794     RC-C6 CM
795     RC-O2 O
796     RC-N4 N2
797     RC-H41 H
798     RC-H42 H
799     RC-H5 HA
800     RC-H6 H4
801     RU-O5' OS
802     RU-C5' CT
803     RU-H5'1 H1
804     RU-H5'2 H1
805     RU-C4' CT
806     RU-H4' H1
807     RU-O4' OS
808     RU-C1' CT
809     RU-H1' H2
810     RU-C3' CT
811     RU-H3' H1
812     RU-C2' CT
813     RU-H2'1 H1
814     RU-O2' OH
815     RU-HO'2 HO
816     RU-O3' OS
817     RU-N1 N*
818     RU-C2 C
819     RU-N3 NA
820     RU-C4 C
821     RU-C5 CM
822     RU-C6 CM
823     RU-O2 O
824     RU-H3 H
825     RU-O4 O
826     RU-H5 HA
827     RU-H6 H4
828     DA-O5' OS
829     DA-C5' CT
830     DA-H5'1 H1
831     DA-H5'2 H1
832     DA-C4' CT
833     DA-H4' H1
834     DA-O4' OS
835     DA-C1' CT
836     DA-H1' H2
837     DA-C3' CT
838     DA-H3' H1
839     DA-C2' CT
840     DA-H2'1 HC
841     DA-H2'2 HC
842     DA-O3' OS
843     DA-N9 N*
844     DA-C4 CB
845     DA-C5 CB
846     DA-N7 NB
847     DA-C8 CK
848     DA-N3 NC
849     DA-C2 CQ
850     DA-N1 NC
851     DA-C6 CA
852     DA-H2 H5
853     DA-N6 N2
854     DA-H61 H
855     DA-H62 H
856     DA-H8 H5
857     DG-O5' OS
858     DG-C5' CT
859     DG-H5'1 H1
860     DG-H5'2 H1
861     DG-C4' CT
862     DG-H4' H1
863     DG-O4' OS
864     DG-C1' CT
865     DG-H1' H2
866     DG-C3' CT
867     DG-H3' H1
868     DG-C2' CT
869     DG-H2'1 HC
870     DG-H2'2 HC
871     DG-O3' OS
872     DG-N9 N*
873     DG-C4 CB
874     DG-C5 CB
875     DG-N7 NB
876     DG-C8 CK
877     DG-N3 NC
878     DG-C2 CA
879     DG-N1 NA
880     DG-C6 C
881     DG-H1 H
882     DG-N2 N2
883     DG-H21 H
884     DG-H22 H
885     DG-O6 O
886     DG-H8 H5
887     DC-O5' OS
888     DC-C5' CT
889     DC-H5'1 H1
890     DC-H5'2 H1
891     DC-C4' CT
892     DC-H4' H1
893     DC-O4' OS
894     DC-C1' CT
895     DC-H1' H2
896     DC-C3' CT
897     DC-H3' H1
898     DC-C2' CT
899     DC-H2'1 HC
900     DC-H2'2 HC
901     DC-O3' OS
902     DC-N1 N*
903     DC-C2 C
904     DC-N3 NC
905     DC-C4 CA
906     DC-C5 CM
907     DC-C6 CM
908     DC-O2 O
909     DC-N4 N2
910     DC-H41 H
911     DC-H42 H
912     DC-H5 HA
913     DC-H6 H4
914     DT-O5' OS
915     DT-C5' CT
916     DT-H5'1 H1
917     DT-H5'2 H1
918     DT-C4' CT
919     DT-H4' H1
920     DT-O4' OS
921     DT-C1' CT
922     DT-H1' H2
923     DT-C3' CT
924     DT-H3' H1
925     DT-C2' CT
926     DT-H2'1 HC
927     DT-H2'2 HC
928     DT-O3' OS
929     DT-N1 N*
930     DT-C2 C
931     DT-N3 NA
932     DT-C4 C
933     DT-C5 CM
934     DT-C6 CM
935     DT-O2 O
936     DT-H3 H
937     DT-O4 O
938     DT-C7 CT
939     DT-H7 HC
940     DT-H6 H4
941     R-Phosphodiester P
942     R-Phosphodiester O2
943     R5H-O5' OH
944     R5H-H5T HO
945     R5P-O5' OS
946     R5P-P P
947     R5P-OP O2
948     R3H-O3' OH
949     R3H-H3T HO
950     R3P-O3' OS
951     R3P-P P
952     R3P-OP O2
953     D-Phosphodiester P
954     D-Phosphodiester O2
955     D5H-O5' OH
956     D5H-H5T HO
957     D5P-O5' OS
958     D5P-P P
959     D5P-OP O2
960     D3H-O3' OH
961     D3H-H3T HO
962     D3P-O3' OS
963     D3P-P P
964     D3P-OP O2
965     TIP3P OW
966     TIP3P HW
967 gezelter 1363 O_TIP3P OW
968     O_TIP4P OW
969     O_TIP4P-Ew OW
970     O_TIP5P OW
971     O_TIP5P-E OW
972     O_SPCE OW
973 kstocke1 1701 O_SPC OW
974     O_POL3 OW
975 gezelter 1363 H_TIP3P HW
976     H_TIP4P HW
977     H_TIP4P-Ew HW
978     H_TIP5P HW
979     H_SPCE HW
980     H_SPC HW
981 kstocke1 1701 H_POL3 HW
982 gezelter 1363 EP_TIP4P EP
983     EP_TIP4P-Ew EP
984     EP_TIP5P EP
985 gezelter 1270 Li+ Li+
986     Na+ Na+
987     K+ K+
988     Rb+ Rb+
989     Cs+ Cs+
990     Mg+2 Mg+
991     Ca+2 Ca+
992     Zn+2 Zn+
993     Cl- Cl-
994     end AtomTypes
995    
996    
997     begin ChargeAtomTypes
998     //name charge
999     GLY-N -0.4157
1000     GLY-CA -0.0252
1001     GLY-C 0.5973
1002     GLY-HN 0.2719
1003     GLY-O -0.5679
1004     GLY-HA 0.0698
1005     ALA-N -0.4157
1006     ALA-CA 0.0337
1007     ALA-C 0.5973
1008     ALA-HN 0.2719
1009     ALA-O -0.5679
1010     ALA-HA 0.0823
1011     ALA-CB -0.1825
1012     ALA-HB 0.0603
1013     VAL-N -0.4157
1014     VAL-CA -0.0875
1015     VAL-C 0.5973
1016     VAL-HN 0.2719
1017     VAL-O -0.5679
1018     VAL-HA 0.0969
1019     VAL-CB 0.2985
1020     VAL-HB -0.0297
1021     VAL-CG1 -0.3192
1022     VAL-HG1 0.0791
1023     VAL-CG2 -0.3192
1024     VAL-HG2 0.0791
1025     LEU-N -0.4157
1026     LEU-CA -0.0518
1027     LEU-C 0.5973
1028     LEU-HN 0.2719
1029     LEU-O -0.5679
1030     LEU-HA 0.0922
1031     LEU-CB -0.1102
1032     LEU-HB 0.0457
1033     LEU-CG 0.3531
1034     LEU-HG -0.0361
1035     LEU-CD1 -0.4121
1036     LEU-HD1 0.1000
1037     LEU-CD2 -0.4121
1038     LEU-HD2 0.1000
1039     ILE-N -0.4157
1040     ILE-CA -0.0597
1041     ILE-C 0.5973
1042     ILE-HN 0.2719
1043     ILE-O -0.5679
1044     ILE-HA 0.0869
1045     ILE-CB 0.1303
1046     ILE-HB 0.0187
1047     ILE-CG1 -0.0430
1048     ILE-HG1 0.0236
1049     ILE-CG2 -0.3204
1050     ILE-HG2 0.0882
1051     ILE-CD -0.0660
1052     ILE-HD 0.0186
1053     SER-N -0.4157
1054     SER-CA -0.0249
1055     SER-C 0.5973
1056     SER-HN 0.2719
1057     SER-O -0.5679
1058     SER-HA 0.0843
1059     SER-CB 0.2117
1060     SER-HB 0.0352
1061     SER-OG -0.6546
1062     SER-HG 0.4275
1063     THR-N -0.4157
1064     THR-CA -0.0389
1065     THR-C 0.5973
1066     THR-HN 0.2719
1067     THR-O -0.5679
1068     THR-HA 0.1007
1069     THR-CB 0.3654
1070     THR-HB 0.0043
1071     THR-OG1 -0.6761
1072     THR-HG1 0.4102
1073     THR-CG2 -0.2438
1074     THR-HG2 0.0642
1075     CYS-N -0.4157
1076     CYS-CA 0.0213
1077     CYS-C 0.5973
1078     CYS-HN 0.2719
1079     CYS-O -0.5679
1080     CYS-HA 0.1124
1081     CYS-CB -0.1231
1082     CYS-HB 0.1112
1083     CYS-SG -0.3119
1084     CYS-HG 0.1933
1085     CYX-N -0.4157
1086     CYX-CA 0.0429
1087     CYX-C 0.5973
1088     CYX-HN 0.2719
1089     CYX-O -0.5679
1090     CYX-HA 0.0766
1091     CYX-CB -0.0790
1092     CYX-HB 0.0910
1093     CYX-SG -0.1081
1094     PRO-N -0.2548
1095     PRO-CA -0.0266
1096     PRO-C 0.5896
1097     PRO-O -0.5748
1098     PRO-HA 0.0641
1099     PRO-CB -0.0070
1100     PRO-HB 0.0253
1101     PRO-CG 0.0189
1102     PRO-HG 0.0213
1103     PRO-CD 0.0192
1104     PRO-HD 0.0391
1105     PHE-N -0.4157
1106     PHE-CA -0.0024
1107     PHE-C 0.5973
1108     PHE-HN 0.2719
1109     PHE-O -0.5679
1110     PHE-HA 0.0978
1111     PHE-CB -0.0343
1112     PHE-HB 0.0295
1113     PHE-CG 0.0118
1114     PHE-CD -0.1256
1115     PHE-HD 0.1330
1116     PHE-CE -0.1704
1117     PHE-HE 0.1430
1118     PHE-CZ -0.1072
1119     PHE-HZ 0.1297
1120     TYR-N -0.4157
1121     TYR-CA -0.0014
1122     TYR-C 0.5973
1123     TYR-HN 0.2719
1124     TYR-O -0.5679
1125     TYR-HA 0.0876
1126     TYR-CB -0.0152
1127     TYR-HB 0.0295
1128     TYR-CG -0.0011
1129     TYR-CD -0.1906
1130     TYR-HD 0.1699
1131     TYR-CE -0.2341
1132     TYR-HE 0.1656
1133     TYR-CZ 0.3226
1134     TYR-OH -0.5579
1135     TYR-HH 0.3992
1136     TRP-N -0.4157
1137     TRP-CA -0.0275
1138     TRP-C 0.5973
1139     TRP-HN 0.2719
1140     TRP-O -0.5679
1141     TRP-HA 0.1123
1142     TRP-CB -0.0050
1143     TRP-HB 0.0339
1144     TRP-CG -0.1415
1145     TRP-CD1 -0.1638
1146     TRP-HD1 0.2062
1147     TRP-CD2 0.1243
1148     TRP-NE1 -0.3418
1149     TRP-HE1 0.3412
1150     TRP-CE2 0.1380
1151     TRP-CE3 -0.2387
1152     TRP-HE3 0.1700
1153     TRP-CZ2 -0.2601
1154     TRP-HZ2 0.1572
1155     TRP-CZ3 -0.1972
1156     TRP-HZ3 0.1447
1157     TRP-CH2 -0.1134
1158     TRP-HH2 0.1417
1159     HIS-N -0.3479
1160     HIS-CA -0.1354
1161     HIS-C 0.7341
1162     HIS-HN 0.2747
1163     HIS-O -0.5894
1164     HIS-HA 0.1212
1165     HIS-CB -0.0414
1166     HIS-HB 0.0810
1167     HIS-CG -0.0012
1168     HIS-ND1 -0.1513
1169     HIS-HD1 0.3866
1170     HIS-CD2 -0.1141
1171     HIS-HD2 0.2317
1172     HIS-CE1 -0.0170
1173     HIS-HE1 0.2681
1174     HIS-NE2 -0.1718
1175     HIS-HE2 0.3911
1176     HID-N -0.4157
1177     HID-CA 0.0188
1178     HID-C 0.5973
1179     HID-HN 0.2719
1180     HID-O -0.5679
1181     HID-HA 0.0881
1182     HID-CB -0.0462
1183     HID-HB 0.0402
1184     HID-CG -0.0266
1185     HID-ND1 -0.3811
1186     HID-HD1 0.3649
1187     HID-CD2 0.1292
1188     HID-HD2 0.1147
1189     HID-CE1 0.2057
1190     HID-HE1 0.1392
1191     HID-NE2 -0.5727
1192     HIE-N -0.4157
1193     HIE-CA -0.0581
1194     HIE-C 0.5973
1195     HIE-HN 0.2719
1196     HIE-O -0.5679
1197     HIE-HA 0.1360
1198     HIE-CB -0.0074
1199     HIE-HB 0.0367
1200     HIE-CG 0.1868
1201     HIE-ND1 -0.5432
1202     HIE-CD2 -0.2207
1203     HIE-HD2 0.1862
1204     HIE-CE1 0.1635
1205     HIE-HE1 0.1435
1206     HIE-NE2 -0.2795
1207     HIE-HE2 0.3339
1208     ASP-N -0.5163
1209     ASP-CA 0.0381
1210     ASP-C 0.5366
1211     ASP-HN 0.2936
1212     ASP-O -0.5819
1213     ASP-HA 0.0880
1214     ASP-CB -0.0303
1215     ASP-HB -0.0122
1216     ASP-CG 0.7994
1217     ASP-OD -0.8014
1218     ASN-N -0.4157
1219     ASN-CA 0.0143
1220     ASN-C 0.5973
1221     ASN-HN 0.2719
1222     ASN-O -0.5679
1223     ASN-HA 0.1048
1224     ASN-CB -0.2041
1225     ASN-HB 0.0797
1226     ASN-CG 0.7130
1227     ASN-OD1 -0.5931
1228     ASN-ND2 -0.9191
1229     ASN-HD2 0.4196
1230     GLU-N -0.5163
1231     GLU-CA 0.0397
1232     GLU-C 0.5366
1233     GLU-HN 0.2936
1234     GLU-O -0.5819
1235     GLU-HA 0.1105
1236     GLU-CB 0.0560
1237     GLU-HB -0.0173
1238     GLU-CG 0.0136
1239     GLU-HG -0.0425
1240     GLU-CD 0.8054
1241     GLU-OE -0.8188
1242     GLN-N -0.4157
1243     GLN-CA -0.0031
1244     GLN-C 0.5973
1245     GLN-HN 0.2719
1246     GLN-O -0.5679
1247     GLN-HA 0.0850
1248     GLN-CB -0.0036
1249     GLN-HB 0.0171
1250     GLN-CG -0.0645
1251     GLN-HG 0.0352
1252     GLN-CD 0.6951
1253     GLN-OE1 -0.6086
1254     GLN-NE2 -0.9407
1255     GLN-HE2 0.4251
1256     MET-N -0.4157
1257     MET-CA -0.0237
1258     MET-C 0.5973
1259     MET-HN 0.2719
1260     MET-O -0.5679
1261     MET-HA 0.0880
1262     MET-CB 0.0342
1263     MET-HB 0.0241
1264     MET-CG 0.0018
1265     MET-HG 0.0440
1266     MET-SD -0.2737
1267     MET-CE -0.0536
1268     MET-HE 0.0684
1269     LYS-N -0.3479
1270     LYS-CA -0.2400
1271     LYS-C 0.7341
1272     LYS-HN 0.2747
1273     LYS-O -0.5894
1274     LYS-HA 0.1426
1275     LYS-CB -0.0094
1276     LYS-HB 0.0362
1277     LYS-CG 0.0187
1278     LYS-HG 0.0103
1279     LYS-CD -0.0479
1280     LYS-HD 0.0621
1281     LYS-CE -0.0143
1282     LYS-HE 0.1135
1283     LYS-NZ -0.3854
1284     LYS-HZ 0.3400
1285     ARG-N -0.3479
1286     ARG-CA -0.2637
1287     ARG-C 0.7341
1288     ARG-HN 0.2747
1289     ARG-O -0.5894
1290     ARG-HA 0.1560
1291     ARG-CB -0.0007
1292     ARG-HB 0.0327
1293     ARG-CG 0.0390
1294     ARG-HG 0.0285
1295     ARG-CD 0.0486
1296     ARG-HD 0.0687
1297     ARG-NE -0.5295
1298     ARG-HE 0.3456
1299     ARG-CZ 0.8076
1300     ARG-NH -0.8627
1301     ARG-HH 0.4478
1302     ORN-N -0.3479
1303     ORN-CA -0.2400
1304     ORN-C 0.7341
1305     ORN-HN 0.2747
1306     ORN-O -0.5894
1307     ORN-HA 0.1426
1308     ORN-CB 0.0099
1309     ORN-HB 0.0362
1310     ORN-CG -0.0279
1311     ORN-HG 0.0621
1312     ORN-CD -0.0143
1313     ORN-HD 0.1135
1314     ORN-NE -0.3854
1315     ORN-HE 0.3400
1316     MAA-N -0.4157
1317     MAA-CA 0.1032
1318     MAA-C 0.5973
1319     MAA-HN 0.2719
1320     MAA-O -0.5679
1321     MAA-CB -0.2503
1322     MAA-HB 0.0853
1323     PCA-N -0.4157
1324     PCA-CA -0.0371
1325     PCA-C 0.5973
1326     PCA-HN 0.2719
1327     PCA-O -0.5679
1328     PCA-HA 0.0850
1329     PCA-CB -0.0036
1330     PCA-HB 0.0171
1331     PCA-CG -0.0645
1332     PCA-HG 0.0352
1333     PCA-CD 0.6000
1334     PCA-OE -0.5700
1335     FOR-C 0.5500
1336     FOR-H 0.0000
1337     FOR-O -0.5500
1338     ACE-CA -0.3662
1339     ACE-HA 0.1123
1340     ACE-C 0.5972
1341     ACE-O -0.5679
1342     C-Term -0.8400
1343     C-Term 0.4200
1344     N-MeAmide -0.4157
1345     N-MeAmide 0.2719
1346     N-MeAmide -0.1490
1347     N-MeAmide 0.0976
1348     NGLY-N 0.2943
1349     NGLY-CA -0.0100
1350     NGLY-C 0.6163
1351     NGLY-HN 0.1642
1352     NGLY-O -0.5722
1353     NGLY-HA 0.0895
1354     NALA-N 0.1414
1355     NALA-CA 0.1281
1356     NALA-C 0.6163
1357     NALA-HN 0.1997
1358     NALA-O -0.5722
1359     NALA-HA 0.0889
1360     NVAL-N 0.0577
1361     NVAL-CA 0.0023
1362     NVAL-C 0.6163
1363     NVAL-HN 0.2272
1364     NVAL-O -0.5722
1365     NVAL-HA 0.1093
1366     NLEU-N 0.1010
1367     NLEU-CA 0.0343
1368     NLEU-C 0.6123
1369     NLEU-HN 0.2148
1370     NLEU-O -0.5713
1371     NLEU-HA 0.1053
1372     NILE-N 0.0311
1373     NILE-CA 0.0389
1374     NILE-C 0.6123
1375     NILE-HN 0.2329
1376     NILE-O -0.5713
1377     NILE-HA 0.1031
1378     NSER-N 0.1849
1379     NSER-CA 0.0684
1380     NSER-C 0.6163
1381     NSER-HN 0.1898
1382     NSER-O -0.5722
1383     NSER-HA 0.0782
1384     NTHR-N 0.1812
1385     NTHR-CA 0.0332
1386     NTHR-C 0.6163
1387     NTHR-HN 0.1934
1388     NTHR-O -0.5722
1389     NTHR-HA 0.1087
1390     NCYS-N 0.1325
1391     NCYS-CA 0.0978
1392     NCYS-C 0.6123
1393     NCYS-HN 0.2023
1394     NCYS-O -0.5713
1395     NCYS-HA 0.1411
1396     NCYX-N 0.2096
1397     NCYX-CA 0.1138
1398     NCYX-C 0.6163
1399     NCYX-HN 0.1815
1400     NCYX-O -0.5713
1401     NCYX-HA 0.0922
1402     NPRO-N -0.2020
1403     NPRO-CA 0.1589
1404     NPRO-C 0.5260
1405     NPRO-HN 0.3120
1406     NPRO-O -0.5000
1407     NPRO-HA 0.1000
1408     NPRO-CD -0.0120
1409     NPRO-HD 0.1000
1410     NPHE-N 0.1737
1411     NPHE-CA 0.0859
1412     NPHE-C 0.6123
1413     NPHE-HN 0.1921
1414     NPHE-O -0.5713
1415     NPHE-HA 0.1041
1416     NTYR-N 0.1940
1417     NTYR-CA 0.0766
1418     NTYR-C 0.6123
1419     NTYR-HN 0.1873
1420     NTYR-O -0.5713
1421     NTYR-HA 0.0983
1422     NTRP-N 0.1913
1423     NTRP-CA 0.0555
1424     NTRP-C 0.6123
1425     NTRP-HN 0.1888
1426     NTRP-O -0.5713
1427     NTRP-HA 0.1162
1428     NHIS-N 0.2560
1429     NHIS-CA 0.0653
1430     NHIS-C 0.7214
1431     NHIS-HN 0.1704
1432     NHIS-O -0.6013
1433     NHIS-HA 0.1047
1434     NHID-N 0.1542
1435     NHID-CA 0.1126
1436     NHID-C 0.6123
1437     NHID-HN 0.1963
1438     NHID-O -0.5713
1439     NHID-HA 0.0958
1440     NHIE-N 0.1472
1441     NHIE-CA 0.0325
1442     NHIE-C 0.6123
1443     NHIE-HN 0.2016
1444     NHIE-O -0.5713
1445     NHIE-HA 0.1380
1446     NASP-N 0.0782
1447     NASP-CA 0.0326
1448     NASP-C 0.5621
1449     NASP-HN 0.2200
1450     NASP-O -0.5889
1451     NASP-HA 0.1141
1452     NASN-N 0.1801
1453     NASN-CA 0.0811
1454     NASN-C 0.6163
1455     NASN-HN 0.1921
1456     NASN-O -0.5722
1457     NASN-HA 0.1231
1458     NGLU-N 0.0017
1459     NGLU-CA 0.0698
1460     NGLU-C 0.5621
1461     NGLU-HN 0.2391
1462     NGLU-O -0.5889
1463     NGLU-HA 0.1202
1464     NCLN-N 0.1493
1465     NCLN-CA 0.0769
1466     NCLN-C 0.6123
1467     NCLN-HN 0.1996
1468     NCLN-O -0.5713
1469     NCLN-HA 0.1015
1470     NMET-N 0.1592
1471     NMET-CA 0.0429
1472     NMET-C 0.6123
1473     NMET-HN 0.1984
1474     NMET-O -0.5713
1475     NMET-HA 0.1116
1476     NLYS-N 0.0966
1477     NLYS-CA -0.0101
1478     NLYS-C 0.7214
1479     NLYS-HN 0.2165
1480     NLYS-O -0.6013
1481     NLYS-HA 0.1180
1482     NARG-N 0.1305
1483     NARG-CA -0.0359
1484     NARG-C 0.7214
1485     NARG-HN 0.2083
1486     NARG-O -0.6013
1487     NARG-HA 0.1242
1488     NORN-N 0.0966
1489     NORN-CA -0.0101
1490     NORN-C 0.7214
1491     NORN-HN 0.2165
1492     NORN-O -0.6013
1493     NORN-HA 0.1180
1494     NAIB-N 0.1000
1495     NAIB-CA 0.2447
1496     NAIB-C 0.6163
1497     NAIB-HN 0.2000
1498     NAIB-O -0.5722
1499     CGLY-N -0.3821
1500     CGLY-CA -0.2493
1501     CGLY-C 0.7231
1502     CGLY-HN 0.2681
1503     CGLY-OXT -0.7855
1504     CGLY-HA 0.1056
1505     CALA-N -0.3821
1506     CALA-CA -0.1532
1507     CALA-C 0.7731
1508     CALA-HN 0.2681
1509     CALA-OXT -0.8055
1510     CALA-HA 0.1067
1511     CVAL-N -0.3821
1512     CVAL-CA -0.3352
1513     CVAL-C 0.8350
1514     CVAL-HN 0.2681
1515     CVAL-OXT -0.8173
1516     CVAL-HA 0.1438
1517     CLEU-N -0.3821
1518     CLEU-CA -0.2874
1519     CLEU-C 0.8326
1520     CLEU-HN 0.2681
1521     CLEU-OXT -0.8199
1522     CLEU-HA 0.1346
1523     CILE-N -0.3821
1524     CILE-CA -0.3070
1525     CILE-C 0.8343
1526     CILE-HN 0.2681
1527     CILE-OXT -0.8190
1528     CILE-HA 0.1375
1529     CSER-N -0.3821
1530     CSER-CA -0.2563
1531     CSER-C 0.8113
1532     CSER-HN 0.2681
1533     CSER-OXT -0.8132
1534     CSER-HA 0.1304
1535     CTHR-N -0.3821
1536     CTHR-CA -0.2315
1537     CTHR-C 0.7810
1538     CTHR-HN 0.2681
1539     CTHR-OXT -0.8044
1540     CTHR-HA 0.1207
1541     CCYS-N -0.3821
1542     CCYS-CA -0.1598
1543     CCYS-C 0.7497
1544     CCYS-HN 0.2681
1545     CCYS-OXT -0.7981
1546     CCYS-HA 0.1396
1547     CCYX-N -0.3821
1548     CCYX-CA -0.1283
1549     CCYX-C 0.7618
1550     CCYX-HN 0.2681
1551     CCYX-OXT -0.8041
1552     CCYX-HA 0.0938
1553     CPRO-N -0.2802
1554     CPRO-CA -0.1236
1555     CPRO-C 0.6631
1556     CPRO-OXT -0.7697
1557     CPRO-HA 0.0776
1558     CPHE-N -0.3821
1559     CPHE-CA -0.1756
1560     CPHE-C 0.7660
1561     CPHE-HN 0.2681
1562     CPHE-OXT -0.8026
1563     CPHE-HA 0.1098
1564     CTYR-N -0.3821
1565     CTYR-CA -0.1911
1566     CTYR-C 0.7817
1567     CTYR-HN 0.2681
1568     CTYR-OXT -0.8070
1569     CTYR-HA 0.1092
1570     CTRP-N -0.3821
1571     CTRP-CA -0.2064
1572     CTRP-C 0.7658
1573     CTRP-HN 0.2681
1574     CTRP-OXT -0.8011
1575     CTRP-HA 0.1272
1576     CHIS-N -0.3481
1577     CHIS-CA -0.1503
1578     CHIS-C 0.8032
1579     CHIS-HN 0.2764
1580     CHIS-OXT -0.8177
1581     CHIS-HA 0.1115
1582     CHID-N -0.3821
1583     CHID-CA -0.1618
1584     CHID-C 0.7615
1585     CHID-HN 0.2681
1586     CHID-OXT -0.8016
1587     CHID-HA 0.1100
1588     CHIE-N -0.3821
1589     CHIE-CA -0.2661
1590     CHIE-C 0.7916
1591     CHIE-HN 0.2681
1592     CHIE-OXT -0.8065
1593     CHIE-HA 0.1650
1594     CASP-N -0.5192
1595     CASP-CA -0.1810
1596     CASP-C 0.7256
1597     CASP-HN 0.3055
1598     CASP-OXT -0.7887
1599     CASP-HA 0.1046
1600     CASN-N -0.3821
1601     CASN-CA -0.1927
1602     CASN-C 0.8050
1603     CASN-HN 0.2681
1604     CASN-OXT -0.8147
1605     CASN-HA 0.1358
1606     CGLU-N -0.5192
1607     CGLU-CA -0.2000
1608     CGLU-C 0.7420
1609     CGLU-HN 0.3055
1610     CGLU-OXT -0.7930
1611     CGLU-HA 0.1399
1612     CGLN-N -0.3821
1613     CGLN-CA -0.2108
1614     CGLN-C 0.7775
1615     CGLN-HN 0.2681
1616     CGLN-OXT -0.8042
1617     CGLN-HA 0.1232
1618     CMET-N -0.3821
1619     CMET-CA -0.2441
1620     CMET-C 0.8013
1621     CMET-HN 0.2681
1622     CMET-OXT -0.8105
1623     CMET-HA 0.1277
1624     CLYS-N -0.3481
1625     CLYS-CA -0.2964
1626     CLYS-C 0.8488
1627     CLYS-HN 0.2764
1628     CLYS-OXT -0.8252
1629     CLYS-HA 0.1438
1630     CARG-N -0.3481
1631     CARG-CA -0.3117
1632     CARG-C 0.8557
1633     CARG-HN 0.2764
1634     CARG-OXT -0.8266
1635     CARG-HA 0.1447
1636     CORN-N -0.3481
1637     CORN-CA -0.2964
1638     CORN-C 0.8488
1639     CORN-HN 0.2764
1640     CORN-OXT -0.8252
1641     CORN-HA 0.1438
1642     CAIB-N -0.3821
1643     CAIB-CA -0.0572
1644     CAIB-C 0.8000
1645     CAIB-HN 0.2681
1646     CAIB-OXT -0.8200
1647     RA-O5' -0.4989
1648     RA-C5' 0.0558
1649     RA-H5'1 0.0679
1650     RA-H5'2 0.0679
1651     RA-C4' 0.1065
1652     RA-H4' 0.1174
1653     RA-O4' -0.3548
1654     RA-C1' 0.0394
1655     RA-H1' 0.2007
1656     RA-C3' 0.2022
1657     RA-H3' 0.0615
1658     RA-C2' 0.0670
1659     RA-H2'1 0.0972
1660     RA-O2' -0.6139
1661     RA-HO'2 0.4186
1662     RA-O3' -0.5246
1663     RA-N9 -0.0251
1664     RA-C4 0.3053
1665     RA-C5 0.0515
1666     RA-N7 -0.6073
1667     RA-C8 0.2006
1668     RA-N3 -0.6997
1669     RA-C2 0.5875
1670     RA-N1 -0.7615
1671     RA-C6 0.7009
1672     RA-H2 0.0473
1673     RA-N6 -0.9019
1674     RA-H61 0.4115
1675     RA-H62 0.4115
1676     RA-H8 0.1553
1677     RG-O5' -0.4989
1678     RG-C5' 0.0558
1679     RG-H5'1 0.0679
1680     RG-H5'2 0.0679
1681     RG-C4' 0.1065
1682     RG-H4' 0.1174
1683     RG-O4' -0.3548
1684     RG-C1' 0.0191
1685     RG-H1' 0.2006
1686     RG-C3' 0.2022
1687     RG-H3' 0.0615
1688     RG-C2' 0.0670
1689     RG-H2'1 0.0972
1690     RG-O2' -0.6139
1691     RG-HO'2 0.4186
1692     RG-O3' -0.5246
1693     RG-N9 0.0492
1694     RG-C4 0.1222
1695     RG-C5 0.1744
1696     RG-N7 -0.5709
1697     RG-C8 0.1374
1698     RG-N3 -0.6323
1699     RG-C2 0.7657
1700     RG-N1 -0.4787
1701     RG-C6 0.4770
1702     RG-H1 0.3424
1703     RG-N2 -0.9672
1704     RG-H21 0.4364
1705     RG-H22 0.4364
1706     RG-O6 -0.5597
1707     RG-H8 0.1640
1708     RC-O5' -0.4989
1709     RC-C5' 0.0558
1710     RC-H5'1 0.0679
1711     RC-H5'2 0.0679
1712     RC-C4' 0.1065
1713     RC-H4' 0.1174
1714     RC-O4' -0.3548
1715     RC-C1' 0.0066
1716     RC-H1' 0.2029
1717     RC-C3' 0.2022
1718     RC-H3' 0.0615
1719     RC-C2' 0.0670
1720     RC-H2'1 0.0972
1721     RC-O2' -0.6139
1722     RC-HO'2 0.4186
1723     RC-O3' -0.5246
1724     RC-N1 -0.0484
1725     RC-C2 0.7538
1726     RC-N3 -0.7584
1727     RC-C4 0.8185
1728     RC-C5 -0.5215
1729     RC-C6 0.0053
1730     RC-O2 -0.6252
1731     RC-N4 -0.9530
1732     RC-H41 0.4234
1733     RC-H42 0.4234
1734     RC-H5 0.1928
1735     RC-H6 0.1958
1736     RU-O5' -0.4989
1737     RU-C5' 0.0558
1738     RU-H5'1 0.0679
1739     RU-H5'2 0.0679
1740     RU-C4' 0.1065
1741     RU-H4' 0.1174
1742     RU-O4' -0.3548
1743     RU-C1' 0.0674
1744     RU-H1' 0.1824
1745     RU-C3' 0.2022
1746     RU-H3' 0.0615
1747     RU-C2' 0.0670
1748     RU-H2'1 0.0972
1749     RU-O2' -0.6139
1750     RU-HO'2 0.4186
1751     RU-O3' -0.5246
1752     RU-N1 0.0418
1753     RU-C2 0.4687
1754     RU-N3 -0.3549
1755     RU-C4 0.5952
1756     RU-C5 -0.3635
1757     RU-C6 -0.1126
1758     RU-O2 -0.5477
1759     RU-H3 0.3154
1760     RU-O4 -0.5761
1761     RU-H5 0.1811
1762     RU-H6 0.2188
1763     DA-O5' -0.4954
1764     DA-C5' -0.0069
1765     DA-H5'1 0.0754
1766     DA-H5'2 0.0754
1767     DA-C4' 0.1629
1768     DA-H4' 0.1176
1769     DA-O4' -0.3691
1770     DA-C1' 0.0431
1771     DA-H1' 0.1838
1772     DA-C3' 0.0713
1773     DA-H3' 0.0985
1774     DA-C2' -0.0854
1775     DA-H2'1 0.0718
1776     DA-H2'2 0.0718
1777     DA-O3' -0.5232
1778     DA-N9 -0.0268
1779     DA-C4 0.3800
1780     DA-C5 0.0725
1781     DA-N7 -0.6175
1782     DA-C8 0.1607
1783     DA-N3 -0.7417
1784     DA-C2 0.5716
1785     DA-N1 -0.7624
1786     DA-C6 0.6897
1787     DA-H2 0.0598
1788     DA-N6 -0.9123
1789     DA-H61 0.4167
1790     DA-H62 0.4167
1791     DA-H8 0.1877
1792     DG-O5' -0.4954
1793     DG-C5' -0.0069
1794     DG-H5'1 0.0754
1795     DG-H5'2 0.0754
1796     DG-C4' 0.1629
1797     DG-H4' 0.1176
1798     DG-O4' -0.3691
1799     DG-C1' 0.0358
1800     DG-H1' 0.1746
1801     DG-C3' 0.0713
1802     DG-H3' 0.0985
1803     DG-C2' -0.0854
1804     DG-H2'1 0.0718
1805     DG-H2'2 0.0718
1806     DG-O3' -0.5232
1807     DG-N9 0.0577
1808     DG-C4 0.1814
1809     DG-C5 0.1991
1810     DG-N7 -0.5725
1811     DG-C8 0.0736
1812     DG-N3 -0.6636
1813     DG-C2 0.7432
1814     DG-N1 -0.5053
1815     DG-C6 0.4918
1816     DG-H1 0.3520
1817     DG-N2 -0.9230
1818     DG-H21 0.4235
1819     DG-H22 0.4235
1820     DG-O6 -0.5699
1821     DG-H8 0.1997
1822     DC-O5' -0.4954
1823     DC-C5' -0.0069
1824     DC-H5'1 0.0754
1825     DC-H5'2 0.0754
1826     DC-C4' 0.1629
1827     DC-H4' 0.1176
1828     DC-O4' -0.3691
1829     DC-C1' -0.0116
1830     DC-H1' 0.1963
1831     DC-C3' 0.0713
1832     DC-H3' 0.0985
1833     DC-C2' -0.0854
1834     DC-H2'1 0.0718
1835     DC-H2'2 0.0718
1836     DC-O3' -0.5232
1837     DC-N1 -0.0339
1838     DC-C2 0.7959
1839     DC-N3 -0.7748
1840     DC-C4 0.8439
1841     DC-C5 -0.5222
1842     DC-C6 -0.0183
1843     DC-O2 -0.6548
1844     DC-N4 -0.9773
1845     DC-H41 0.4314
1846     DC-H42 0.4314
1847     DC-H5 0.1863
1848     DC-H6 0.2293
1849     DT-O5' -0.4954
1850     DT-C5' -0.0069
1851     DT-H5'1 0.0754
1852     DT-H5'2 0.0754
1853     DT-C4' 0.1629
1854     DT-H4' 0.1176
1855     DT-O4' -0.3691
1856     DT-C1' 0.0680
1857     DT-H1' 0.1804
1858     DT-C3' 0.0713
1859     DT-H3' 0.0985
1860     DT-C2' -0.0854
1861     DT-H2'1 0.0718
1862     DT-H2'2 0.0718
1863     DT-O3' -0.5232
1864     DT-N1 -0.0239
1865     DT-C2 0.5677
1866     DT-N3 -0.4340
1867     DT-C4 0.5194
1868     DT-C5 0.0025
1869     DT-C6 -0.2209
1870     DT-O2 -0.5881
1871     DT-H3 0.3420
1872     DT-O4 -0.5563
1873     DT-C7 -0.2269
1874     DT-H7 0.0770
1875     DT-H6 0.2607
1876     R-Phosphodiester 1.1662
1877     R-Phosphodiester -0.7760
1878     R5H-O5' -0.6223
1879     R5H-H5T 0.4295
1880     R5P-O5' -0.6328
1881     R5P-P 0.9000
1882     R5P-OP -0.8200
1883     R3H-O3' -0.6541
1884     R3H-H3T 0.4376
1885     R3P-O3' -0.6565
1886     R3P-P 0.9000
1887     R3P-OP -0.8200
1888     D-Phosphodiester 1.1659
1889     D-Phosphodiester -0.7761
1890     D5H-O5' -0.6318
1891     D5H-H5T 0.4422
1892     D5P-O5' -0.6296
1893     D5P-P 0.9000
1894     D5P-OP -0.8200
1895     D3H-O3' -0.6549
1896     D3H-H3T 0.4396
1897     D3P-O3' -0.6553
1898     D3P-P 0.9000
1899     D3P-OP -0.8200
1900     TIP3P -0.834
1901     TIP3P 0.417
1902 gezelter 1363 O_TIP3P -0.834
1903     O_SPCE -0.8476
1904     O_SPC -0.82
1905     H_TIP3P 0.417
1906     H_TIP4P 0.520
1907     H_TIP4P-Ew 0.52422
1908     H_TIP5P 0.241
1909     H_SPCE 0.4238
1910     H_SPC 0.42
1911     EP_TIP4P -1.040
1912     EP_TIP4P-Ew -1.04844
1913     EP_TIP5P -0.241
1914 kstocke1 1701 O_POL3 -0.7300
1915     H_POL3 0.3650
1916 gezelter 1270 Li+ 1.000
1917     Na+ 1.000
1918     K+ 1.000
1919     Rb+ 1.000
1920     Cs+ 1.000
1921     Mg+2 2.000
1922     Ca+2 2.000
1923     Zn+2 2.000
1924     Cl- -1.000
1925     end ChargeAtomTypes
1926    
1927    
1928    
1929     begin LennardJonesAtomTypes
1930     //name epsilon sigma
1931     CT 0.109400 3.399670
1932     C 0.086000 3.399670
1933     CA 0.086000 3.399670
1934     CM 0.086000 3.399670
1935     CC 0.086000 3.399670
1936     CV 0.086000 3.399670
1937     CW 0.086000 3.399670
1938     CR 0.086000 3.399670
1939     CB 0.086000 3.399670
1940     C* 0.086000 3.399670
1941     CN 0.086000 3.399670
1942     CK 0.086000 3.399670
1943     CQ 0.086000 3.399670
1944     N 0.170000 3.249999
1945     NA 0.170000 3.249999
1946     NB 0.170000 3.249999
1947     NC 0.170000 3.249999
1948     N* 0.170000 3.249999
1949     N2 0.170000 3.249999
1950     N3 0.170000 3.340870
1951     OW 0.152000 3.150752
1952     OH 0.210400 3.066473
1953     OS 0.170000 3.000012
1954     O 0.210000 2.959922
1955     O2 0.210000 2.959922
1956     S 0.250000 3.563595
1957     SH 0.250000 3.563595
1958     P 0.200000 3.741775
1959     H 0.015700 1.069078
1960     HW 0.000000 0.000178
1961     HO 0.000000 0.000178
1962     HS 0.015700 1.069078
1963     HA 0.015000 2.599642
1964     HC 0.015700 2.649533
1965     H1 0.015700 2.471353
1966     H2 0.015700 2.293173
1967     H3 0.015700 2.114994
1968     HP 0.015700 1.959977
1969     H4 0.015000 2.510553
1970     H5 0.015000 2.421463
1971     Li+ 0.018300 2.025904
1972     Na+ 0.002770 3.328398
1973     K+ 0.000328 4.736018
1974     Rb+ 0.000170 5.266993
1975     Cs+ 0.000081 6.049202
1976     Mg+ 0.894700 1.412253
1977     Ca+ 0.459789 3.052397
1978     Zn+ 0.012500 1.959977
1979     Cl- 0.100000 4.401040
1980     end LennardJonesAtomTypes
1981    
1982    
1983     begin BondTypes
1984     //Atom1 Atom2 Harmonic b0 kb (kcal/mol)
1985     CT CT Harmonic 1.526000 310.000000
1986     CT C Harmonic 1.522000 317.000000
1987     CT CA Harmonic 1.510000 317.000000
1988     CT CM Harmonic 1.510000 317.000000
1989     CT CC Harmonic 1.504000 317.000000
1990     CT C* Harmonic 1.495000 317.000000
1991     CT N Harmonic 1.449000 337.000000
1992     CT N* Harmonic 1.475000 337.000000
1993     CT N2 Harmonic 1.463000 337.000000
1994     CT N3 Harmonic 1.471000 367.000000
1995     CT OH Harmonic 1.410000 320.000000
1996     CT OS Harmonic 1.410000 320.000000
1997     CT S Harmonic 1.810000 227.000000
1998     CT SH Harmonic 1.810000 237.000000
1999     CT HC Harmonic 1.090000 340.000000
2000     CT H1 Harmonic 1.090000 340.000000
2001     CT H2 Harmonic 1.090000 340.000000
2002     CT H3 Harmonic 1.090000 340.000000
2003     CT HP Harmonic 1.090000 340.000000
2004     C CA Harmonic 1.409000 469.000000
2005     C CM Harmonic 1.444000 410.000000
2006     C CB Harmonic 1.419000 447.000000
2007     C N Harmonic 1.335000 490.000000
2008     C NA Harmonic 1.388000 418.000000
2009     C NC Harmonic 1.358000 457.000000
2010     C N* Harmonic 1.383000 424.000000
2011     C O Harmonic 1.229000 570.000000
2012     C O2 Harmonic 1.250000 656.000000
2013     CA CA Harmonic 1.400000 469.000000
2014     CA CM Harmonic 1.433000 427.000000
2015     CA CB Harmonic 1.404000 469.000000
2016     CA CN Harmonic 1.400000 469.000000
2017     CA NA Harmonic 1.381000 427.000000
2018     CA NC Harmonic 1.339000 483.000000
2019     CA N2 Harmonic 1.340000 481.000000
2020     CA OH Harmonic 1.364000 450.000000
2021     CA HA Harmonic 1.080000 367.000000
2022     CA H4 Harmonic 1.080000 367.000000
2023     CM CM Harmonic 1.350000 549.000000
2024     CM N* Harmonic 1.365000 448.000000
2025     CM HA Harmonic 1.080000 367.000000
2026     CM H4 Harmonic 1.080000 367.000000
2027     CM H5 Harmonic 1.080000 367.000000
2028     CC CV Harmonic 1.375000 512.000000
2029     CC CW Harmonic 1.371000 518.000000
2030     CC NA Harmonic 1.385000 422.000000
2031     CC NB Harmonic 1.394000 410.000000
2032     CV NB Harmonic 1.394000 410.000000
2033     CV H4 Harmonic 1.080000 367.000000
2034     CW C* Harmonic 1.352000 546.000000
2035     CW NA Harmonic 1.381000 427.000000
2036     CW H4 Harmonic 1.080000 367.000000
2037     CR NA Harmonic 1.343000 477.000000
2038     CR NB Harmonic 1.335000 488.000000
2039     CR H5 Harmonic 1.080000 367.000000
2040     CB CB Harmonic 1.370000 520.000000
2041     CB C* Harmonic 1.459000 388.000000
2042     CB CN Harmonic 1.419000 447.000000
2043     CB NB Harmonic 1.391000 414.000000
2044     CB NC Harmonic 1.354000 461.000000
2045     CB N* Harmonic 1.374000 436.000000
2046     C* HC Harmonic 1.080000 367.000000
2047     CN NA Harmonic 1.380000 428.000000
2048     CK NB Harmonic 1.304000 529.000000
2049     CK N* Harmonic 1.371000 440.000000
2050     CK H5 Harmonic 1.080000 367.000000
2051     CQ NC Harmonic 1.324000 502.000000
2052     CQ H5 Harmonic 1.080000 367.000000
2053     N H Harmonic 1.010000 434.000000
2054     NA H Harmonic 1.010000 434.000000
2055     N* H Harmonic 1.010000 434.000000
2056     N2 H Harmonic 1.010000 434.000000
2057     N3 H Harmonic 1.010000 434.000000
2058     OW HW Harmonic 0.957200 553.000000
2059     OH P Harmonic 1.610000 230.000000
2060     OH HO Harmonic 0.960000 553.000000
2061     OS P Harmonic 1.610000 230.000000
2062     OS HO Harmonic 0.960000 553.000000
2063     O2 P Harmonic 1.480000 525.000000
2064     S S Harmonic 2.038000 166.000000
2065     SH HS Harmonic 1.336000 274.000000
2066     HW HW Harmonic 1.513600 553.000000
2067     end BondType
2068    
2069    
2070     begin BendTypes
2071     //Atom1 Atom2 Atom3 Harmonic Theta Ktheta
2072     CT CT CT Harmonic 109.500000 80.000000
2073     CT CT C Harmonic 111.100000 126.000000
2074     CT CT CA Harmonic 114.000000 126.000000
2075     CT CT CC Harmonic 113.100000 126.000000
2076     CT CT C* Harmonic 115.600000 126.000000
2077     CT CT N Harmonic 109.700000 160.000000
2078     CT CT N* Harmonic 109.500000 100.000000
2079     CT CT N2 Harmonic 111.200000 160.000000
2080     CT CT N3 Harmonic 111.200000 160.000000
2081     CT CT OH Harmonic 109.500000 100.000000
2082     CT CT OS Harmonic 109.500000 100.000000
2083     CT CT S Harmonic 114.700000 100.000000
2084     CT CT SH Harmonic 108.600000 100.000000
2085     CT CT HC Harmonic 109.500000 100.000000
2086     CT CT H1 Harmonic 109.500000 100.000000
2087     CT CT H2 Harmonic 109.500000 100.000000
2088     CT CT HP Harmonic 109.500000 100.000000
2089     C CT N Harmonic 110.100000 126.000000
2090     C CT N3 Harmonic 111.200000 160.000000
2091     C CT HC Harmonic 109.500000 100.000000
2092     C CT H1 Harmonic 109.500000 100.000000
2093     C CT HP Harmonic 109.500000 100.000000
2094     CA CT HC Harmonic 109.500000 100.000000
2095     CM CT HC Harmonic 109.500000 100.000000
2096     CC CT HC Harmonic 109.500000 100.000000
2097     C* CT HC Harmonic 109.500000 100.000000
2098     N CT H1 Harmonic 109.500000 100.000000
2099     N* CT OS Harmonic 109.500000 100.000000
2100     N* CT H1 Harmonic 109.500000 100.000000
2101     N* CT H2 Harmonic 109.500000 100.000000
2102     N2 CT H1 Harmonic 109.500000 100.000000
2103     N3 CT H1 Harmonic 109.500000 100.000000
2104     N3 CT HP Harmonic 109.500000 100.000000
2105     OH CT H1 Harmonic 109.500000 100.000000
2106     OS CT H1 Harmonic 109.500000 100.000000
2107     OS CT H2 Harmonic 109.500000 100.000000
2108     S CT H1 Harmonic 109.500000 100.000000
2109     SH CT H1 Harmonic 109.500000 100.000000
2110     HC CT HC Harmonic 109.500000 70.000000
2111     H1 CT H1 Harmonic 109.500000 70.000000
2112     H2 CT H2 Harmonic 109.500000 70.000000
2113     HP CT HP Harmonic 109.500000 70.000000
2114     CT C N Harmonic 116.600000 140.000000
2115     CT C O Harmonic 120.400000 160.000000
2116     CT C O2 Harmonic 117.000000 140.000000
2117     CA C CA Harmonic 120.000000 126.000000
2118     CM C NA Harmonic 114.100000 140.000000
2119     CM C O Harmonic 125.300000 160.000000
2120     CB C NA Harmonic 111.300000 140.000000
2121     CB C O Harmonic 128.800000 160.000000
2122     N C O Harmonic 122.900000 160.000000
2123     NA C N* Harmonic 115.400000 140.000000
2124     NA C O Harmonic 120.600000 160.000000
2125     NC C N* Harmonic 118.600000 140.000000
2126     NC C O Harmonic 122.500000 160.000000
2127     N* C O Harmonic 120.900000 160.000000
2128     O C O Harmonic 126.000000 160.000000
2129     O2 C O2 Harmonic 126.000000 160.000000
2130     CT CA CA Harmonic 120.000000 140.000000
2131     C CA CA Harmonic 120.000000 126.000000
2132     C CA HA Harmonic 120.000000 100.000000
2133     CA CA CA Harmonic 120.000000 126.000000
2134     CA CA CB Harmonic 120.000000 126.000000
2135     CA CA CN Harmonic 120.000000 126.000000
2136     CA CA OH Harmonic 120.000000 140.000000
2137     CA CA HA Harmonic 120.000000 100.000000
2138     CA CA H4 Harmonic 120.000000 100.000000
2139     CM CA NC Harmonic 121.500000 140.000000
2140     CM CA N2 Harmonic 120.100000 140.000000
2141     CB CA NC Harmonic 117.300000 140.000000
2142     CB CA N2 Harmonic 123.500000 140.000000
2143     CB CA HA Harmonic 120.000000 100.000000
2144     CB CA H4 Harmonic 120.000000 100.000000
2145     CN CA HA Harmonic 120.000000 100.000000
2146     NA CA NC Harmonic 123.300000 140.000000
2147     NA CA N2 Harmonic 116.000000 140.000000
2148     NC CA N2 Harmonic 119.300000 140.000000
2149     N2 CA N2 Harmonic 120.000000 140.000000
2150     CT CM C Harmonic 119.700000 140.000000
2151     CT CM CM Harmonic 119.700000 140.000000
2152     C CM CM Harmonic 120.700000 126.000000
2153     C CM HA Harmonic 119.700000 100.000000
2154     C CM H4 Harmonic 119.700000 100.000000
2155     CA CM CM Harmonic 117.000000 126.000000
2156     CA CM HA Harmonic 123.300000 100.000000
2157     CA CM H4 Harmonic 123.300000 100.000000
2158     CM CM N* Harmonic 121.200000 140.000000
2159     CM CM HA Harmonic 119.700000 100.000000
2160     CM CM H4 Harmonic 119.700000 100.000000
2161     N* CM H4 Harmonic 119.100000 100.000000
2162     CT CC CV Harmonic 120.000000 140.000000
2163     CT CC CW Harmonic 120.000000 140.000000
2164     CT CC NA Harmonic 120.000000 140.000000
2165     CT CC NB Harmonic 120.000000 140.000000
2166     CV CC NA Harmonic 120.000000 140.000000
2167     CW CC NA Harmonic 120.000000 140.000000
2168     CW CC NB Harmonic 120.000000 140.000000
2169     CC CV NB Harmonic 120.000000 140.000000
2170     CC CV H4 Harmonic 120.000000 100.000000
2171     NB CV H4 Harmonic 120.000000 100.000000
2172     CC CW NA Harmonic 120.000000 140.000000
2173     CC CW H4 Harmonic 120.000000 100.000000
2174     C* CW NA Harmonic 108.700000 140.000000
2175     C* CW H4 Harmonic 120.000000 100.000000
2176     NA CW H4 Harmonic 120.000000 100.000000
2177     NA CR NA Harmonic 120.000000 140.000000
2178     NA CR NB Harmonic 120.000000 140.000000
2179     NA CR H5 Harmonic 120.000000 100.000000
2180     NB CR H5 Harmonic 120.000000 100.000000
2181     C CB CB Harmonic 119.200000 126.000000
2182     C CB NB Harmonic 130.000000 140.000000
2183     CA CB CB Harmonic 117.300000 126.000000
2184     CA CB C* Harmonic 134.900000 126.000000
2185     CA CB CN Harmonic 116.200000 126.000000
2186     CA CB NB Harmonic 132.400000 140.000000
2187     CB CB NB Harmonic 110.400000 140.000000
2188     CB CB NC Harmonic 127.700000 140.000000
2189     CB CB N* Harmonic 106.200000 140.000000
2190     C* CB CN Harmonic 108.800000 126.000000
2191     NC CB N* Harmonic 126.200000 140.000000
2192     CT C* CW Harmonic 125.000000 140.000000
2193     CT C* CB Harmonic 128.600000 140.000000
2194     CW C* CB Harmonic 106.400000 126.000000
2195     CA CN CB Harmonic 122.700000 126.000000
2196     CA CN NA Harmonic 132.800000 140.000000
2197     CB CN NA Harmonic 104.400000 140.000000
2198     NB CK N* Harmonic 113.900000 140.000000
2199     NB CK H5 Harmonic 123.050000 100.000000
2200     N* CK H5 Harmonic 123.050000 100.000000
2201     NC CQ NC Harmonic 129.100000 140.000000
2202     NC CQ H5 Harmonic 115.450000 100.000000
2203     CT N CT Harmonic 118.000000 100.000000
2204     CT N C Harmonic 121.900000 100.000000
2205     CT N H Harmonic 118.040000 100.000000
2206     C N H Harmonic 120.000000 100.000000
2207     H N H Harmonic 120.000000 70.000000
2208     C NA C Harmonic 126.400000 140.000000
2209     C NA CA Harmonic 125.200000 140.000000
2210     C NA H Harmonic 116.800000 100.000000
2211     CA NA H Harmonic 118.000000 100.000000
2212     CC NA CR Harmonic 120.000000 140.000000
2213     CC NA H Harmonic 120.000000 100.000000
2214     CW NA CR Harmonic 120.000000 140.000000
2215     CW NA CN Harmonic 111.600000 140.000000
2216     CW NA H Harmonic 120.000000 100.000000
2217     CR NA H Harmonic 120.000000 100.000000
2218     CN NA H Harmonic 123.100000 100.000000
2219     CC NB CR Harmonic 117.000000 140.000000
2220     CV NB CR Harmonic 117.000000 140.000000
2221     CB NB CK Harmonic 103.800000 140.000000
2222     C NC CA Harmonic 120.500000 140.000000
2223     CA NC CB Harmonic 112.200000 140.000000
2224     CA NC CQ Harmonic 118.600000 140.000000
2225     CB NC CQ Harmonic 111.000000 140.000000
2226     CT N* C Harmonic 117.600000 140.000000
2227     CT N* CM Harmonic 121.200000 140.000000
2228     CT N* CB Harmonic 125.800000 140.000000
2229     CT N* CK Harmonic 128.800000 140.000000
2230     C N* CM Harmonic 121.600000 140.000000
2231     C N* H Harmonic 119.200000 100.000000
2232     CM N* H Harmonic 121.200000 100.000000
2233     CB N* CK Harmonic 105.400000 140.000000
2234     CB N* H Harmonic 125.800000 100.000000
2235     CK N* H Harmonic 128.800000 100.000000
2236     CT N2 CA Harmonic 123.200000 100.000000
2237     CT N2 H Harmonic 118.400000 100.000000
2238     CA N2 H Harmonic 120.000000 100.000000
2239     H N2 H Harmonic 120.000000 70.000000
2240     CT N3 CT Harmonic 109.500000 100.000000
2241     CT N3 H Harmonic 109.500000 100.000000
2242     H N3 H Harmonic 109.500000 70.000000
2243     HW OW HW Harmonic 104.520000 200.000000
2244     CT OH HO Harmonic 108.500000 110.000000
2245     CA OH HO Harmonic 113.000000 100.000000
2246     P OH HO Harmonic 108.500000 90.000000
2247     CT OS CT Harmonic 109.500000 120.000000
2248     CT OS P Harmonic 120.500000 200.000000
2249     P OS P Harmonic 120.500000 200.000000
2250     CT S CT Harmonic 98.900000 124.000000
2251     CT S S Harmonic 103.700000 136.000000
2252     CT SH HS Harmonic 96.000000 86.000000
2253     HS SH HS Harmonic 92.070000 70.000000
2254     OH P OS Harmonic 102.600000 90.000000
2255     OH P O2 Harmonic 108.230000 90.000000
2256     OS P OS Harmonic 102.600000 90.000000
2257     OS P O2 Harmonic 108.230000 200.000000
2258     O2 P O2 Harmonic 119.900000 280.000000
2259     OW HW HW Harmonic 127.740000 0.000000
2260     end BendTypes
2261    
2262    
2263     begin TorsionTypes
2264     //Atom1 Atom2 Atom3 Atom4 Charmm Kchi n delta [Kchi n delta]
2265     CT CT CT CT Charmm 0.200000 1 180.000000 0.25 2 180 0.18 3 0
2266     CT CT CT C Charmm 0.156000 3 0.000000
2267     CT CT CT N Charmm 0.156000 3 0.000000
2268     CT CT CT N* Charmm 0.156000 3 0.000000
2269     CT CT CT N2 Charmm 0.156000 3 0.000000
2270     CT CT CT N3 Charmm 0.156000 3 0.000000
2271     CT CT CT OH Charmm 0.156000 3 0.000000
2272     CT CT CT OS Charmm 0.156000 3 0.000000
2273     CT CT CT S Charmm 0.156000 3 0.000000
2274     CT CT CT HC Charmm 0.160000 3 0.000000
2275     CT CT CT H1 Charmm 0.156000 3 0.000000
2276     CT CT CT H2 Charmm 0.156000 3 0.000000
2277     CT CT CT HP Charmm 0.156000 3 0.000000
2278     C CT CT C Charmm 0.156000 3 0.000000
2279     C CT CT CA Charmm 0.156000 3 0.000000
2280     C CT CT CC Charmm 0.156000 3 0.000000
2281     C CT CT C* Charmm 0.156000 3 0.000000
2282     C CT CT N Charmm 0.156000 3 0.000000
2283     C CT CT N3 Charmm 0.156000 3 0.000000
2284     C CT CT OH Charmm 0.156000 3 0.000000
2285     C CT CT S Charmm 0.156000 3 0.000000
2286     C CT CT SH Charmm 0.156000 3 0.000000
2287     C CT CT HC Charmm 0.156000 3 0.000000
2288     C CT CT H1 Charmm 0.156000 3 0.000000
2289     C CT CT HP Charmm 0.156000 3 0.000000
2290     CA CT CT N Charmm 0.156000 3 0.000000
2291     CA CT CT N3 Charmm 0.156000 3 0.000000
2292     CA CT CT H1 Charmm 0.156000 3 0.000000
2293     CA CT CT HP Charmm 0.156000 3 0.000000
2294     CC CT CT N Charmm 0.156000 3 0.000000
2295     CC CT CT N3 Charmm 0.156000 3 0.000000
2296     CC CT CT H1 Charmm 0.156000 3 0.000000
2297     CC CT CT HP Charmm 0.156000 3 0.000000
2298     C* CT CT N Charmm 0.156000 3 0.000000
2299     C* CT CT N3 Charmm 0.156000 3 0.000000
2300     C* CT CT H1 Charmm 0.156000 3 0.000000
2301     C* CT CT HP Charmm 0.156000 3 0.000000
2302     N CT CT OH Charmm 0.156000 3 0.000000
2303     N CT CT S Charmm 0.156000 3 0.000000
2304     N CT CT SH Charmm 0.156000 3 0.000000
2305     N CT CT HC Charmm 0.156000 3 0.000000
2306     N CT CT H1 Charmm 0.156000 3 0.000000
2307     N* CT CT OH Charmm 0.156000 3 0.000000
2308     N* CT CT HC Charmm 0.156000 3 0.000000
2309     N* CT CT H1 Charmm 0.156000 3 0.000000
2310     N2 CT CT HC Charmm 0.156000 3 0.000000
2311     N3 CT CT OH Charmm 0.156000 3 0.000000
2312     N3 CT CT S Charmm 0.156000 3 0.000000
2313     N3 CT CT SH Charmm 0.156000 3 0.000000
2314     N3 CT CT HC Charmm 0.156000 3 0.000000
2315     N3 CT CT H1 Charmm 0.156000 3 0.000000
2316     OH CT CT N* Charmm 0.156000 3 0.000000
2317     OH CT CT OH Charmm 0.144000 3 0.000000 1.175 2 0
2318     OH CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2319     OH CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2320     OH CT CT H1 Charmm 0.156000 3 0.000000
2321     OH CT CT H2 Charmm 0.156000 3 0.000000
2322     OH CT CT HP Charmm 0.156000 3 0.000000
2323     OS CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2324     OS CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2325     OS CT CT H1 Charmm 0.156000 3 0.000000
2326     S CT CT HC Charmm 0.156000 3 0.000000
2327     S CT CT H1 Charmm 0.156000 3 0.000000
2328     S CT CT HP Charmm 0.156000 3 0.000000
2329     SH CT CT H1 Charmm 0.156000 3 0.000000
2330     SH CT CT HP Charmm 0.156000 3 0.000000
2331     HC CT CT HC Charmm 0.150000 3 0.000000
2332     HC CT CT H1 Charmm 0.156000 3 0.000000
2333     HC CT CT H2 Charmm 0.156000 3 0.000000
2334     HC CT CT HP Charmm 0.156000 3 0.000000
2335     H1 CT CT H1 Charmm 0.156000 3 0.000000
2336     H1 CT CT H2 Charmm 0.156000 3 0.000000
2337     H1 CT CT HP Charmm 0.156000 3 0.000000
2338     CT CT C N Charmm 0.070000 2 0.000000 0.1 4 0
2339     CT CT C O Charmm 0.000000 2 0.000000
2340     CT CT C O2 Charmm 0.000000 2 0.000000
2341     N CT C N Charmm 1.700000 1 180.000000 2.0 2 180
2342     N CT C O Charmm 0.000000 2 0.000000
2343     N CT C O2 Charmm 0.000000 2 0.000000
2344     N3 CT C N Charmm 0.000000 2 0.000000
2345     N3 CT C O Charmm 0.000000 2 0.000000
2346     N3 CT C O2 Charmm 0.000000 2 0.000000
2347     HC CT C N Charmm 0.000000 2 0.000000
2348     HC CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2349     HC CT C O2 Charmm 0.000000 2 0.000000
2350     H1 CT C N Charmm 0.000000 2 0.000000
2351     H1 CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2352     H1 CT C O2 Charmm 0.000000 2 0.000000
2353     CT CT CA CA Charmm 0.000000 2 0.000000
2354     HC CT CA CA Charmm 0.000000 2 0.000000
2355     HC CT CM C Charmm 0.000000 3 0.000000
2356     HC CT CM CM Charmm 1.150000 1 0.000000 0.38 3 180
2357     CT CT CC CV Charmm 0.000000 2 0.000000
2358     CT CT CC CW Charmm 0.000000 2 0.000000
2359     CT CT CC NA Charmm 0.000000 2 0.000000
2360     CT CT CC NB Charmm 0.000000 2 0.000000
2361     HC CT CC CV Charmm 0.000000 2 0.000000
2362     HC CT CC CW Charmm 0.000000 2 0.000000
2363     HC CT CC NA Charmm 0.000000 2 0.000000
2364     HC CT CC NB Charmm 0.000000 2 0.000000
2365     CT CT C* CW Charmm 0.000000 2 0.000000
2366     CT CT C* CB Charmm 0.000000 2 0.000000
2367     HC CT C* CW Charmm 0.000000 2 0.000000
2368     HC CT C* CB Charmm 0.000000 2 0.000000
2369     CT CT N CT Charmm 0.000000 2 0.000000
2370     CT CT N C Charmm 0.530000 1 0.000000 0.15 3 180 0.5 4 180
2371     CT CT N H Charmm 0.000000 2 0.000000
2372     C CT N CT Charmm 0.000000 2 0.000000
2373     C CT N C Charmm 0.800000 1 0.000000 0.85 2 180
2374     C CT N H Charmm 0.000000 2 0.000000
2375     H1 CT N CT Charmm 0.000000 2 0.000000
2376     H1 CT N C Charmm 0.000000 2 0.000000
2377     H1 CT N H Charmm 0.000000 2 0.000000
2378     CT CT N* C Charmm 0.000000 2 0.000000
2379     CT CT N* CM Charmm 0.000000 2 0.000000
2380     CT CT N* CB Charmm 0.000000 2 0.000000
2381     CT CT N* CK Charmm 0.000000 2 0.000000
2382     OS CT N* C Charmm 0.000000 2 0.000000
2383     OS CT N* CM Charmm 0.000000 2 180.000000 2.5 1 0
2384     OS CT N* CB Charmm 0.000000 2 0.000000
2385     OS CT N* CK Charmm 0.000000 2 180.000000 2.5 1 0
2386     H2 CT N* C Charmm 0.000000 2 0.000000
2387     H2 CT N* CM Charmm 0.000000 2 0.000000
2388     H2 CT N* CB Charmm 0.000000 2 0.000000
2389     H2 CT N* CK Charmm 0.000000 2 0.000000
2390     CT CT N2 CA Charmm 0.000000 3 0.000000
2391     CT CT N2 H Charmm 0.000000 3 0.000000
2392     H1 CT N2 CA Charmm 0.000000 3 0.000000
2393     H1 CT N2 H Charmm 0.000000 3 0.000000
2394     CT CT N3 CT Charmm 0.156000 3 0.000000
2395     CT CT N3 H Charmm 0.156000 3 0.000000
2396     C CT N3 CT Charmm 0.156000 3 0.000000
2397     C CT N3 H Charmm 0.156000 3 0.000000
2398     H1 CT N3 CT Charmm 0.156000 3 0.000000
2399     H1 CT N3 H Charmm 0.156000 3 0.000000
2400     HP CT N3 CT Charmm 0.156000 3 0.000000
2401     HP CT N3 H Charmm 0.156000 3 0.000000
2402     CT CT OH HO Charmm 0.025000 1 0.000000 0.16 3 0
2403     H1 CT OH HO Charmm 0.167000 3 0.000000
2404     CT CT OS CT Charmm 0.383000 3 0.000000 0.1 2 180
2405     CT CT OS C Charmm 0.383000 3 0.000000 0.8 1 180
2406     CT CT OS P Charmm 0.383000 3 0.000000
2407     N* CT OS CT Charmm 0.383000 3 0.000000 0.65 2 0
2408     OS CT OS CT Charmm 1.350000 1 180.000000 0.85 3 180 0.1 3 0
2409     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2410     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2411     H1 CT OS CT Charmm 0.383000 3 0.000000
2412     H1 CT OS P Charmm 0.383000 3 0.000000
2413     H2 CT OS CT Charmm 0.383000 3 0.000000
2414     CT CT S CT Charmm 0.333000 3 0.000000
2415     CT CT S S Charmm 0.333000 3 0.000000
2416     H1 CT S CT Charmm 0.333000 3 0.000000
2417     H1 CT S S Charmm 0.333000 3 0.000000
2418     CT CT SH HS Charmm 0.250000 3 0.000000
2419     H1 CT SH HS Charmm 0.250000 3 0.000000
2420     NA C CM CT Charmm 2.175000 2 180.000000
2421     NA C CM CM Charmm 2.175000 2 180.000000
2422     NA C CM HA Charmm 2.175000 2 180.000000
2423     O C CM CT Charmm 2.175000 2 180.000000
2424     O C CM CM Charmm 2.175000 2 180.000000 0.3 3 0
2425     O C CM HA Charmm 2.175000 2 180.000000
2426     NA C CB CB Charmm 3.000000 2 180.000000
2427     NA C CB NB Charmm 3.000000 2 180.000000
2428     O C CB CB Charmm 3.000000 2 180.000000
2429     O C CB NB Charmm 3.000000 2 180.000000
2430     CT C N CT Charmm 2.500000 2 180.000000
2431     CT C N H Charmm 2.500000 2 180.000000
2432     O C N CT Charmm 2.500000 2 180.000000
2433     O C N H Charmm 2.000000 1 0.000000 2.5 2 180
2434     CM C NA C Charmm 1.350000 2 180.000000
2435     CM C NA H Charmm 1.350000 2 180.000000
2436     CB C NA CA Charmm 1.350000 2 180.000000
2437     CB C NA H Charmm 1.350000 2 180.000000
2438     N* C NA C Charmm 1.350000 2 180.000000
2439     N* C NA H Charmm 1.350000 2 180.000000
2440     O C NA C Charmm 1.350000 2 180.000000
2441     O C NA CA Charmm 1.350000 2 180.000000
2442     O C NA H Charmm 1.350000 2 180.000000
2443     N* C NC CA Charmm 4.000000 2 180.000000
2444     O C NC CA Charmm 4.000000 2 180.000000
2445     NA C N* CT Charmm 1.450000 2 180.000000
2446     NA C N* CM Charmm 1.450000 2 180.000000
2447     NC C N* CT Charmm 1.450000 2 180.000000
2448     NC C N* CM Charmm 1.450000 2 180.000000
2449     O C N* CT Charmm 1.450000 2 180.000000
2450     O C N* CM Charmm 1.450000 2 180.000000
2451     O C OH HO Charmm 1.900000 1 0.000000 2.3 2 180
2452     O C OS CT Charmm 1.400000 1 180.000000 2.7 2 180
2453     CT CA CA CA Charmm 3.625000 2 180.000000
2454     CT CA CA HA Charmm 3.625000 2 180.000000
2455     CA CA CA CA Charmm 3.625000 2 180.000000
2456     CA CA CA CB Charmm 3.625000 2 180.000000
2457     CA CA CA CN Charmm 3.625000 2 180.000000
2458     CA CA CA OH Charmm 3.625000 2 180.000000
2459     CA CA CA HA Charmm 3.625000 2 180.000000
2460     CB CA CA HA Charmm 3.625000 2 180.000000
2461     CN CA CA HA Charmm 3.625000 2 180.000000
2462     OH CA CA HA Charmm 3.625000 2 180.000000
2463     HA CA CA HA Charmm 3.625000 2 180.000000
2464     NC CA CM CM Charmm 2.550000 2 180.000000
2465     NC CA CM HA Charmm 2.550000 2 180.000000
2466     N2 CA CM CM Charmm 2.550000 2 180.000000
2467     N2 CA CM HA Charmm 2.550000 2 180.000000
2468     CA CA CB C* Charmm 3.500000 2 180.000000
2469     CA CA CB CN Charmm 3.500000 2 180.000000
2470     NC CA CB CB Charmm 3.500000 2 180.000000
2471     NC CA CB NB Charmm 3.500000 2 180.000000
2472     N2 CA CB CB Charmm 3.500000 2 180.000000
2473     N2 CA CB NB Charmm 3.500000 2 180.000000
2474     HA CA CB C* Charmm 3.500000 2 180.000000
2475     HA CA CB CN Charmm 3.500000 2 180.000000
2476     CA CA CN CB Charmm 3.625000 2 180.000000
2477     CA CA CN NA Charmm 3.625000 2 180.000000
2478     HA CA CN CB Charmm 3.625000 2 180.000000
2479     HA CA CN NA Charmm 3.625000 2 180.000000
2480     NC CA NA C Charmm 1.500000 2 180.000000
2481     NC CA NA H Charmm 1.500000 2 180.000000
2482     N2 CA NA C Charmm 1.500000 2 180.000000
2483     N2 CA NA H Charmm 1.500000 2 180.000000
2484     CM CA NC C Charmm 4.800000 2 180.000000
2485     CB CA NC CQ Charmm 4.800000 2 180.000000
2486     NA CA NC CB Charmm 4.800000 2 180.000000
2487     N2 CA NC C Charmm 4.800000 2 180.000000
2488     N2 CA NC CB Charmm 4.800000 2 180.000000
2489     N2 CA NC CQ Charmm 4.800000 2 180.000000
2490     CM CA N2 H Charmm 2.400000 2 180.000000
2491     CB CA N2 H Charmm 2.400000 2 180.000000
2492     NA CA N2 H Charmm 2.400000 2 180.000000
2493     NC CA N2 H Charmm 2.400000 2 180.000000
2494     N2 CA N2 CT Charmm 2.400000 2 180.000000
2495     N2 CA N2 H Charmm 2.400000 2 180.000000
2496     CA CA OH HO Charmm 0.900000 2 180.000000
2497     CT CM CM CT Charmm 1.900000 1 180.000000 6.65 2 180
2498     CT CM CM N* Charmm 6.650000 2 180.000000
2499     CT CM CM H4 Charmm 6.650000 2 180.000000
2500     C CM CM N* Charmm 6.650000 2 180.000000
2501     C CM CM H4 Charmm 6.650000 2 180.000000
2502     CA CM CM N* Charmm 6.650000 2 180.000000
2503     CA CM CM H4 Charmm 6.650000 2 180.000000
2504     HA CM CM N* Charmm 6.650000 2 180.000000
2505     HA CM CM H4 Charmm 6.650000 2 180.000000
2506     CM CM N* CT Charmm 1.850000 2 180.000000
2507     CM CM N* C Charmm 1.850000 2 180.000000
2508     H4 CM N* CT Charmm 1.850000 2 180.000000
2509     H4 CM N* C Charmm 1.850000 2 180.000000
2510     CT CC CV NB Charmm 5.150000 2 180.000000
2511     CT CC CV H4 Charmm 5.150000 2 180.000000
2512     NA CC CV NB Charmm 5.150000 2 180.000000
2513     NA CC CV H4 Charmm 5.150000 2 180.000000
2514     CT CC CW NA Charmm 5.375000 2 180.000000
2515     CT CC CW H4 Charmm 5.375000 2 180.000000
2516     NA CC CW NA Charmm 5.375000 2 180.000000
2517     NA CC CW H4 Charmm 5.375000 2 180.000000
2518     NB CC CW NA Charmm 5.375000 2 180.000000
2519     NB CC CW H4 Charmm 5.375000 2 180.000000
2520     CT CC NA CR Charmm 1.400000 2 180.000000
2521     CT CC NA H Charmm 1.400000 2 180.000000
2522     CV CC NA CR Charmm 1.400000 2 180.000000
2523     CV CC NA H Charmm 1.400000 2 180.000000
2524     CW CC NA CR Charmm 1.400000 2 180.000000
2525     CW CC NA H Charmm 1.400000 2 180.000000
2526     CT CC NB CR Charmm 2.400000 2 180.000000
2527     CW CC NB CR Charmm 2.400000 2 180.000000
2528     CC CV NB CR Charmm 2.400000 2 180.000000
2529     H4 CV NB CR Charmm 2.400000 2 180.000000
2530     NA CW C* CT Charmm 6.525000 2 180.000000
2531     NA CW C* CB Charmm 6.525000 2 180.000000
2532     H4 CW C* CT Charmm 6.525000 2 180.000000
2533     H4 CW C* CB Charmm 6.525000 2 180.000000
2534     CC CW NA CR Charmm 1.500000 2 180.000000
2535     CC CW NA H Charmm 1.500000 2 180.000000
2536     C* CW NA CN Charmm 1.500000 2 180.000000
2537     C* CW NA H Charmm 1.500000 2 180.000000
2538     H4 CW NA CR Charmm 1.500000 2 180.000000
2539     H4 CW NA CN Charmm 1.500000 2 180.000000
2540     H4 CW NA H Charmm 1.500000 2 180.000000
2541     NA CR NA CC Charmm 2.325000 2 180.000000
2542     NA CR NA CW Charmm 2.325000 2 180.000000
2543     NA CR NA H Charmm 2.325000 2 180.000000
2544     NB CR NA CC Charmm 2.325000 2 180.000000
2545     NB CR NA CW Charmm 2.325000 2 180.000000
2546     NB CR NA H Charmm 2.325000 2 180.000000
2547     H5 CR NA CC Charmm 2.325000 2 180.000000
2548     H5 CR NA CW Charmm 2.325000 2 180.000000
2549     H5 CR NA H Charmm 2.325000 2 180.000000
2550     NA CR NB CC Charmm 5.000000 2 180.000000
2551     NA CR NB CV Charmm 5.000000 2 180.000000
2552     H5 CR NB CC Charmm 5.000000 2 180.000000
2553     H5 CR NB CV Charmm 5.000000 2 180.000000
2554     C CB CB NC Charmm 5.450000 2 180.000000
2555     C CB CB N* Charmm 5.450000 2 180.000000
2556     CA CB CB NC Charmm 5.450000 2 180.000000
2557     CA CB CB N* Charmm 5.450000 2 180.000000
2558     NB CB CB NC Charmm 5.450000 2 180.000000
2559     NB CB CB N* Charmm 5.450000 2 180.000000
2560     CA CB C* CT Charmm 1.675000 2 180.000000
2561     CA CB C* CW Charmm 1.675000 2 180.000000
2562     CN CB C* CT Charmm 1.675000 2 180.000000
2563     CN CB C* CW Charmm 1.675000 2 180.000000
2564     CA CB CN CA Charmm 3.000000 2 180.000000
2565     CA CB CN NA Charmm 3.000000 2 180.000000
2566     C* CB CN CA Charmm 3.000000 2 180.000000
2567     C* CB CN NA Charmm 3.000000 2 180.000000
2568     C CB NB CK Charmm 2.550000 2 180.000000
2569     CA CB NB CK Charmm 2.550000 2 180.000000
2570     CB CB NB CK Charmm 2.550000 2 180.000000
2571     CB CB NC CA Charmm 4.150000 2 180.000000
2572     CB CB NC CQ Charmm 4.150000 2 180.000000
2573     N* CB NC CA Charmm 4.150000 2 180.000000
2574     N* CB NC CQ Charmm 4.150000 2 180.000000
2575     CB CB N* CT Charmm 1.650000 2 180.000000
2576     CB CB N* CK Charmm 1.650000 2 180.000000
2577     NC CB N* CT Charmm 1.650000 2 180.000000
2578     NC CB N* CK Charmm 1.650000 2 180.000000
2579     CA CN NA CW Charmm 1.525000 2 180.000000
2580     CA CN NA H Charmm 1.525000 2 180.000000
2581     CB CN NA CW Charmm 1.525000 2 180.000000
2582     CB CN NA H Charmm 1.525000 2 180.000000
2583     N* CK NB CB Charmm 10.000000 2 180.000000
2584     H5 CK NB CB Charmm 10.000000 2 180.000000
2585     NB CK N* CT Charmm 1.700000 2 180.000000
2586     NB CK N* CB Charmm 1.700000 2 180.000000
2587     H5 CK N* CT Charmm 1.700000 2 180.000000
2588     H5 CK N* CB Charmm 1.700000 2 180.000000
2589     NC CQ NC CA Charmm 6.800000 2 180.000000
2590     NC CQ NC CB Charmm 6.800000 2 180.000000
2591     H5 CQ NC CA Charmm 6.800000 2 180.000000
2592     H5 CQ NC CB Charmm 6.800000 2 180.000000
2593     HO OH P OS Charmm 0.250000 3 0.000000
2594     HO OH P O2 Charmm 0.250000 3 0.000000
2595     CT OS P OH Charmm 0.250000 3 0.000000 1.2 2 0
2596     CT OS P OS Charmm 0.250000 3 0.000000 1.2 2 0
2597     CT OS P O2 Charmm 0.250000 3 0.000000
2598     CT S S CT Charmm 3.500000 2 0.000000 0.6 3 0
2599     end TorsionTypes
2600    
2601    
2602     begin Improper TorsionTypes
2603     CT N C O 10.500000 2 180.000000
2604     CM NA C O 10.500000 2 180.000000
2605     CB NA C O 10.500000 2 180.000000
2606     N* NA C O 10.500000 2 180.000000
2607     CT O2 C O2 10.500000 2 180.000000
2608     CA CA CA CT 1.100000 2 180.000000
2609     CA CA CA OH 1.100000 2 180.000000
2610     CA CA CA HA 1.100000 2 180.000000
2611     CN CA CA HA 1.100000 2 180.000000
2612     NC CM CA N2 1.100000 2 180.000000
2613     CA CB CA HA 1.100000 2 180.000000
2614     CB NC CA N2 1.100000 2 180.000000
2615     NA NC CA N2 1.100000 2 180.000000
2616     N2 N2 CA N2 10.500000 2 180.000000
2617     CM CA CM HA 1.100000 2 180.000000
2618     C CM CM CT 1.100000 2 180.000000
2619     C CM CM HA 1.100000 2 180.000000
2620     N* CM CM H4 1.100000 2 180.000000
2621     NA CV CC CT 1.100000 2 180.000000
2622     NA CW CC CT 1.100000 2 180.000000
2623     NB CW CC CT 1.100000 2 180.000000
2624     CC NB CV H4 1.100000 2 180.000000
2625     CC NA CW H4 1.100000 2 180.000000
2626     C* NA CW H4 1.100000 2 180.000000
2627     NA NA CR H5 1.100000 2 180.000000
2628     NB NA CR H5 1.100000 2 180.000000
2629     NA NB CR H5 1.100000 2 180.000000
2630     CW CB C* CT 1.100000 2 180.000000
2631     NB N* CK H5 1.100000 2 180.000000
2632     NC NC CQ H5 1.100000 2 180.000000
2633     C CT N CT 1.000000 2 180.000000
2634     C CT N H 1.000000 2 180.000000
2635     C H N H 1.000000 2 180.000000
2636     C C NA H 1.000000 2 180.000000
2637     C CA NA H 1.000000 2 180.000000
2638     CR CW NA H 1.000000 2 180.000000
2639     CC CR NA H 1.000000 2 180.000000
2640     CW CN NA H 1.000000 2 180.000000
2641     CM C N* CT 1.000000 2 180.000000
2642     CK CB N* CT 1.000000 2 180.000000
2643     CT CA N2 H 1.000000 2 180.000000
2644     CA H N2 H 1.000000 2 180.000000
2645     end Improper TorsionTypes
2646