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root/OpenMD/branches/development/CMakeLists.txt
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Comparing branches/development/CMakeLists.txt (file contents):
Revision 1639 by gezelter, Sat Sep 24 20:18:07 2011 UTC vs.
Revision 1725 by gezelter, Sat May 26 18:13:43 2012 UTC

# Line 1 | Line 1
1   # Top level cmake script for OpenMD.
2 + project(OpenMD CXX)
3 + cmake_minimum_required(VERSION 2.8.5)
4  
5 < cmake_minimum_required (VERSION 2.6)
4 < project(OpenMD)
5 > SET(CMAKE_MODULE_PATH "${CMAKE_SOURCE_DIR}/cmake/modules")
6  
7 + if (NOT CMAKE_BUILD_TYPE)
8 +  set(CMAKE_BUILD_TYPE "Release")
9 + endif()
10  
11 + find_package(MPI)
12 + if (NOT MPI_CXX_FOUND)
13 + message(STATUS "========== OpenMD Parallel Information ==========")
14 + message(STATUS )
15 + message(STATUS "No MPI compiler found. Perhaps you want to set one explicitly?")
16 + message(STATUS "To override the default compiler, set the environment variable")
17 + message(STATUS "     export CXX=/full/path/to/mpic++")
18 + message(STATUS "in bash or ksh or sh.  In csh or tcsh, use:")
19 + message(STATUS "     setenv CXX /full/path/to/mpic++")
20 + message(STATUS "before running the cmake command.")
21 + message(STATUS )
22 + message(STATUS "=================================================")
23 + endif()
24 + IF ( MPI_CXX_FOUND )
25 +  INCLUDE_DIRECTORIES(${MPI_CXX_INCLUDE_PATH})
26 + ENDIF()
27 +
28 + include(CheckCXXCompilerFlag)
29 + include(CheckIncludeFileCXX)
30 + include(CheckCXXSymbolExists)
31 +
32   # OpenMD version number.
33   set (VERSION_MAJOR "2")
34   set (VERSION_MINOR "0")
35   set (VERSION_TINY "0")  
36 + option(SINGLE_PRECISION "Build Single precision (float) version" OFF)
37  
38 < # cmake modules that are needed to build oopse
39 < SET(CMAKE_MODULE_PATH ${OpenMD_SOURCE_DIR}/cmake/modules)
40 < SET(EXECUTABLE_OUTPUT_PATH ${PROJECT_BINARY_DIR}/bin)
41 < SET(LIBRARY_OUTPUT_PATH ${PROJECT_BINARY_DIR}/lib)
38 > IF(CMAKE_INSTALL_PREFIX_INITIALIZED_TO_DEFAULT)
39 >  SET(CMAKE_INSTALL_PREFIX
40 >    "/usr/local/openmd" CACHE PATH "OpenMD install prefix" FORCE
41 >    )
42 > ENDIF(CMAKE_INSTALL_PREFIX_INITIALIZED_TO_DEFAULT)
43  
44 < enable_language(CXX  C)
44 > # ---------- Setup output Directories -------------------------
45 > SET (CMAKE_LIBRARY_OUTPUT_DIRECTORY
46 >  ${PROJECT_BINARY_DIR}/lib
47 >  CACHE PATH
48 >  "Single directory for all shared libraries"
49 >  )
50 > # --------- Setup the Executable output Directory -------------
51 > SET (CMAKE_RUNTIME_OUTPUT_DIRECTORY
52 >  ${PROJECT_BINARY_DIR}/bin
53 >  CACHE PATH
54 >  "Single directory for all Executables."
55 >  )
56 > # --------- Setup the static library directory -------------
57 > SET (CMAKE_ARCHIVE_OUTPUT_DIRECTORY
58 >  ${PROJECT_BINARY_DIR}/lib
59 >  CACHE PATH
60 >  "Single directory for all static libraries."
61 >  )
62  
19 – if ( APPLE )
20 – set(MPI_COMPILER /opt/local/lib/openmpi/bin/mpic++)
21 – set(MPI_LIBRARY "MPI_LIBRARY-NOTFOUND" )
22 – endif( APPLE )
23 – FIND_PACKAGE(MPI)
24 – IF ( MPI_FOUND )
25 –  SET(CMAKE_REQUIRED_INCLUDES "${MPI_INCLUDE_PATH};${CMAKE_REQUIRED_INCLUDES}")
26 –  INCLUDE_DIRECTORIES(${MPI_INCLUDE_PATH})
27 – ENDIF()
28 –
63   FIND_PACKAGE(Subversion)
64   IF ( Subversion_FOUND AND EXISTS ${PROJECT_SOURCE_DIR}/.svn )
65    Subversion_WC_INFO(${PROJECT_SOURCE_DIR} Project)
66 <  MESSAGE("Current revision is ${Project_WC_REVISION}")
66 >  MESSAGE(STATUS "Current revision is ${Project_WC_REVISION}")
67    Subversion_WC_LOG(${PROJECT_SOURCE_DIR} Project)
68    SET(SVN_REV ${Project_WC_REVISION})
69    ADD_DEFINITIONS( -DSVN_REV=${Project_WC_REVISION} )
70 +  SET(GENERATELOGS "${PROJECT_SOURCE_DIR}/doc/svn2cl")
71 +  ADD_CUSTOM_TARGET(ChangeLog
72 +     COMMAND ${GENERATELOGS} "--group-by-day" "--include-rev"
73 +     "--linelen=78" "--output=${PROJECT_BINARY_DIR}/ChangeLog" "${PROJECT_SOURCE_DIR}"
74 +  )
75   ENDIF()
76  
77 + check_include_file_cxx(conio.h      HAVE_CONIO_H)
78 + check_cxx_symbol_exists(strncasecmp   "string.h"   HAVE_STRNCASECMP)
79 +
80   # Optional libraries: If we can find these, we will build with them
81   # Look for OpenBabel libraries
82   find_package(OpenBabel2)
83   IF(OPENBABEL2_FOUND)
84    SET(USE_OPENBABEL)
85    include_directories(${OPENBABEL2_INCLUDE_DIR})
86 <  message(STATUS "Openbabel libs: " ${OPENBABEL2_LIBRARIES})
87 < #  TARGET_LINK_LIBRARIES(${OPENBABEL2_LIBRARIES})
86 >  # link libraries are added only for targets that need them.
87 > ELSE(OPENBABEL2_FOUND)
88 >  MESSAGE(STATUS "No OpenBabel found - will not build atom2md")
89   ENDIF(OPENBABEL2_FOUND)
90  
91   #Look for QHULL Libraries
92 < find_package(QHULL)
92 > set(QHULL_USE_STATIC 1)
93 > find_package(Qhull)
94   IF(QHULL_FOUND)
95    SET(HAVE_QHULL 1)
96    include_directories(${QHULL_INCLUDE_DIR})
97    LINK_LIBRARIES(${QHULL_LIBRARIES})
98 + ELSE(QHULL_FOUND)
99 +  MESSAGE(STATUS "No Qhull found - will be missing some features")
100   ENDIF(QHULL_FOUND)
101  
56 –
102   # zlib stuff
103   find_package(ZLIB)
104   if(ZLIB_FOUND)
# Line 61 | Line 106 | if(ZLIB_FOUND)
106    add_definitions(-DHAVE_LIBZ)
107    include_directories(${ZLIB_INCLUDE_DIR})
108    LINK_LIBRARIES(${ZLIB_LIBRARIES})
109 + ELSE(ZLIB_FOUND)
110 +  MESSAGE(STATUS "No zlib found - will be missing compressed dump files")
111   endif(ZLIB_FOUND)
112  
113 < #FFTW
114 < INCLUDE(${CMAKE_MODULE_PATH}/FindFFTW.cmake)
115 < IF(FFTW_FOUND)
113 > #FFTW3
114 > IF(SINGLE_PRECISION)
115 >  find_package(FFTW3 COMPONENTS single)
116 > else()
117 >  find_package(FFTW3 COMPONENTS double)
118 > endif(SINGLE_PRECISION)
119 > if (FFTW3_FOUND)
120 >  include_directories (${CMAKE_SOURCE_DIR} ${CMAKE_BINARY_DIR} ${FFTW3_INCLUDE_DIR})
121    SET(HAVE_LIBFFTW 1)
122 <  SET(HAVE_FFTW3_H)
123 <  INCLUDE_DIRECTORIES(${FFTW_INCLUDE_DIR})
124 <  LINK_LIBRARIES(${FFTW_LIBRARIES})
125 < ENDIF(FFTW_FOUND)
122 >  SET(HAVE_FFTW3_H 1)
123 >  INCLUDE_DIRECTORIES(${FFTW3_INCLUDE_DIR})
124 >  LINK_LIBRARIES(${FFTW3_LIBRARIES})
125 > ELSE(FFTW3_FOUND)
126 >  MESSAGE(STATUS "No fftw3 found - will be missing some analysis modules")
127 > endif (FFTW3_FOUND)
128  
129  
130 < #include checks
131 < include(CheckIncludeFile)
132 < CHECK_INCLUDE_FILE(fftw3.h HAVE_FFTW3_H)
133 < CHECK_INCLUDE_FILE(fftw.h HAVE_FFWT_H)
134 < CHECK_INCLUDE_FILE(dfftw.h HAVE_DFFTW_H)
135 < CHECK_INCLUDE_FILE(cmath.h HAVE_CMATH_H)
136 < check_include_file(limits.h HAVE_LIMITS_H)
137 < check_include_file(stdlib.h HAVE_STDLIB_H)
138 < check_include_file(string.h HAVE_STRING_H)
139 < check_include_file("sys/ioctl.h" HAVE_SYS_IOCTL_H)
86 < check_include_file(unistd.h HAVE_UNISTD_H)
130 > # add a target to generate API documentation with Doxygen
131 > find_package(Doxygen)
132 > if(DOXYGEN_FOUND)
133 >  configure_file("${CMAKE_CURRENT_SOURCE_DIR}/doc/Doxyfile.in" "${CMAKE_CURRENT_BINARY_DIR}/doc/Doxyfile" @ONLY)
134 >  add_custom_target(doc
135 >    ${DOXYGEN_EXECUTABLE} "${CMAKE_CURRENT_BINARY_DIR}/doc/Doxyfile"
136 >    WORKING_DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}/doc"
137 >    COMMENT "Generating API documentation with Doxygen" VERBATIM
138 >  )
139 > endif(DOXYGEN_FOUND)
140  
88 – #symbol checks
89 – include(CheckSymbolExists)
90 –
91 – #function checks
92 – include(CheckFunctionExists)
93 – check_function_exists(atexit HAVE_ATEXIT)
94 – check_function_exists(floor HAVE_FLOOR)
95 – check_function_exists(pow HAVE_POW)
96 – check_function_exists(select HAVE_SELECT)
97 – check_function_exists(sqrt HAVE_SQRT)
98 – check_function_exists(strcasecmp HAVE_STRCASECMP)
99 – check_function_exists(strchr HAVE_STRCHR)
100 – check_function_exists(strdup HAVE_STRDUP)
101 – check_function_exists(strncasecmp HAVE_STRNCASECMP)
102 – check_function_exists(strstr HAVE_STRSTR)
103 – check_function_exists(strtol HAVE_STRTOL)
104 – check_function_exists(strtoull HAVE_STRTOULL)
105 – check_function_exists(sysmp HAVE_SYSMP)
106 – check_function_exists(table HAVE_TABLE)
107 –
108 –
141   FIND_PACKAGE(Perl)
142   IF(PERL_FOUND)
143    SET(PERL ${PERL_EXECUTABLE})
144   ELSE(PERL_FOUND)
145 <  MESSAGE(STATUS "Failed to find perl")
145 >  MESSAGE(STATUS "Failed to find perl - some scripts will not be made")
146   ENDIF(PERL_FOUND)
147  
148 + SET(PERL_INSTALLDIRS "site" CACHE STRING "Perl installation
149 + locations")
150 +
151   FIND_PACKAGE(PythonInterp)
152   IF(PYTHON_EXECUTABLE)
153    SET(PYTHON ${PYTHON_EXECUTABLE})
154   ELSE(PYTHON_EXECUTABLE)
155 <  MESSAGE(STATUS "Failed to find python")
155 >  MESSAGE(STATUS "Failed to find python - some scripts will not be made")
156   ENDIF(PYTHON_EXECUTABLE)
157  
123 – SET(PERL_INSTALLDIRS "site" CACHE STRING "Perl installation locations")
124 –
125 –
126 – include(CMakePrintSystemInformation)
127 –
158   configure_file (
159    "${PROJECT_SOURCE_DIR}/src/config.h.cmake"
160 <  "${PROJECT_SOURCE_DIR}/src/config.h"
161 <  )
162 < include_directories (${PROJECT_SOURCE_DIR}/src)
133 <
134 < #CONFIGURE_FILE(${CMAKE_CURRENT_SOURCE_DIR}/config.h.in ${CMAKE_CURRENT_BINARY_DIR}/config.h)
160 >  "${PROJECT_BINARY_DIR}/config.h"
161 > )
162 > include_directories("${PROJECT_BINARY_DIR}" "${PROJECT_SOURCE_DIR}/src")
163  
136 –
164   #Add executables for build
165   set (PROGRAMS
166   openmd
# Line 180 | Line 207 | src/brains/DataStorage.cpp
207   src/antlr/TreeParser.cpp
208   src/brains/BlockSnapshotManager.cpp
209   src/brains/DataStorage.cpp
210 + src/brains/ForceField.cpp
211   src/brains/MoleculeCreator.cpp
212   src/brains/PairList.cpp
213   src/brains/Register.cpp
# Line 191 | Line 219 | src/integrators/DLM.cpp
219   src/hydrodynamics/HydroProp.cpp
220   src/hydrodynamics/Sphere.cpp
221   src/integrators/DLM.cpp
222 + src/integrators/FluctuatingChargeNVT.cpp
223 + src/integrators/FluctuatingChargePropagator.cpp
224   src/integrators/Integrator.cpp
225   src/integrators/IntegratorFactory.cpp
226   src/integrators/LangevinDynamics.cpp
# Line 213 | Line 243 | src/io/EAMAtomTypesSectionParser.cpp
243   src/io/ChargeAtomTypesSectionParser.cpp
244   src/io/DirectionalAtomTypesSectionParser.cpp
245   src/io/EAMAtomTypesSectionParser.cpp
246 + src/io/FluctuatingChargeAtomTypesSectionParser.cpp
247   src/io/ForceFieldOptions.cpp
248   src/io/GayBerneAtomTypesSectionParser.cpp
249   src/io/Globals.cpp
# Line 223 | Line 254 | src/io/ParamConstraint.cpp
254   src/io/NonBondedInteractionsSectionParser.cpp
255   src/io/OptionSectionParser.cpp
256   src/io/ParamConstraint.cpp
257 + src/io/PolarizableAtomTypesSectionParser.cpp
258   src/io/SCAtomTypesSectionParser.cpp
259   src/io/SectionParser.cpp
260   src/io/SectionParserManager.cpp
# Line 291 | Line 323 | src/types/CutoffGroupStamp.cpp
323   src/types/CharmmTorsionType.cpp
324   src/types/Component.cpp
325   src/types/CutoffGroupStamp.cpp
326 < src/types/DirectionalAtomType.cpp
326 > src/types/DirectionalAdapter.cpp
327 > src/types/EAMAdapter.cpp
328 > src/types/FixedChargeAdapter.cpp
329 > src/types/FluctuatingChargeAdapter.cpp
330   src/types/FragmentStamp.cpp
331 + src/types/GayBerneAdapter.cpp
332   src/types/ImproperCosineInversionType.cpp
333   src/types/InversionStamp.cpp
334 + src/types/LennardJonesAdapter.cpp
335   src/types/MoleculeStamp.cpp
336 + src/types/MultipoleAdapter.cpp
337   src/types/NonBondedInteractionType.cpp
338 + src/types/PolarizableAdapter.cpp
339   src/types/RestraintStamp.cpp
340   src/types/RigidBodyStamp.cpp
341   src/types/ShapeAtomType.cpp
342 + src/types/StickyAdapter.cpp
343 + src/types/SuttonChenAdapter.cpp
344   src/types/TorsionStamp.cpp
345   src/types/ZconsStamp.cpp
305 – src/UseTheForce/Amber_FF.cpp
306 – src/UseTheForce/CLAYFF.cpp
307 – src/UseTheForce/DUFF.cpp
308 – src/UseTheForce/EADM_FF.cpp
309 – src/UseTheForce/EAM_FF.cpp
310 – src/UseTheForce/ForceField.cpp
311 – src/UseTheForce/ForceFieldFactory.cpp
312 – src/UseTheForce/MnM_FF.cpp
313 – src/UseTheForce/SC_FF.cpp
314 – src/UseTheForce/SHAPES_FF.cpp
346   src/utils/ElementsTable.cpp
347   src/utils/MoLocator.cpp
348   src/utils/OpenMDBitSet.cpp
# Line 356 | Line 387 | src/utils/ProgressBar.cpp
387   src/restraints/RestraintForceManager.cpp
388   src/restraints/ThermoIntegrationForceManager.cpp
389   src/utils/ProgressBar.cpp
390 < src/utils/simError.c
390 > src/utils/simError.cpp
391   )
392  
393   IF(QHULL_FOUND)
# Line 390 | Line 421 | target_link_libraries(openmd_MPI openmd_parallel openm
421   COMPILE_DEFINITIONS IS_MPI
422   )
423   target_link_libraries(openmd_MPI openmd_parallel openmd_core openmd_parallel openmd_core)
424 +  INSTALL(TARGETS
425 +        openmd_parallel openmd_MPI
426 +  RUNTIME DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE
427 +  LIBRARY DESTINATION lib PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ
428 +  ARCHIVE DESTINATION lib PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ
429 + )
430   ENDIF (MPI_FOUND)
431  
432   set (DUMP2XYZSOURCE
433   src/applications/dump2Xyz/Dump2XYZ.cpp
434 < src/applications/dump2Xyz/Dump2XYZCmd.c
434 > src/applications/dump2Xyz/Dump2XYZCmd.cpp
435   )
436  
437   set (DYNAMICPROPSSOURCE
# Line 415 | Line 452 | src/applications/dynamicProps/VCorrFunc.cpp
452   src/applications/dynamicProps/ThetaCorrFunc.cpp
453   src/applications/dynamicProps/TimeCorrFunc.cpp
454   src/applications/dynamicProps/VCorrFunc.cpp
455 < src/applications/dynamicProps/DynamicPropsCmd.c
455 > src/applications/dynamicProps/DynamicPropsCmd.cpp
456   )
457  
458   set (HYDROSOURCE
# Line 428 | Line 465 | src/applications/hydrodynamics/ShapeBuilder.cpp
465   src/applications/hydrodynamics/HydrodynamicsModelFactory.cpp
466   src/applications/hydrodynamics/RoughShell.cpp
467   src/applications/hydrodynamics/ShapeBuilder.cpp
468 < src/applications/hydrodynamics/HydroCmd.c
468 > src/applications/hydrodynamics/HydroCmd.cpp
469   )
470  
471   set (STATICPROPSSOURCE
# Line 457 | Line 494 | src/applications/staticProps/TwoDGofR.cpp
494   src/applications/staticProps/StaticProps.cpp
495   src/applications/staticProps/TetrahedralityParam.cpp
496   src/applications/staticProps/TwoDGofR.cpp
497 < src/applications/staticProps/StaticPropsCmd.c
497 > src/applications/staticProps/StaticPropsCmd.cpp
498   )
499  
500   set (NANOPARTICLEBUILDERSOURCE
501   src/applications/nanoparticleBuilder/nanoparticleBuilder.cpp
502   src/applications/nanoparticleBuilder/shapedLatticeSpherical.cpp
503 < src/applications/nanoparticleBuilder/nanoparticleBuilderCmd.c
503 > src/applications/nanoparticleBuilder/nanoparticleBuilderCmd.cpp
504   )
505  
506 + set (NANORODBUILDERSOURCE
507 + src/applications/nanoparticleBuilder/nanorodBuilder.cpp
508 + src/applications/nanoparticleBuilder/shapedLatticeRod.cpp
509 + src/applications/nanoparticleBuilder/nanorodBuilderCmd.cpp
510 + )
511 +
512 + set (NANOROD_PENTBUILDERSOURCE
513 + src/applications/nanoparticleBuilder/nanorod_pentBuilder.cpp
514 + src/applications/nanoparticleBuilder/nanorod_pentBuilderCmd.cpp
515 + src/applications/nanoparticleBuilder/shapedLatticePentRod.cpp
516 + )
517 +
518   set (RANDOMBUILDERSOURCE
519   src/applications/randomBuilder/randomBuilder.cpp
520 < src/applications/randomBuilder/randomBuilderCmd.c
520 > src/applications/randomBuilder/randomBuilderCmd.cpp
521   )
522  
523   set(SIMPLEBUILDERSOURCE
524   src/applications/simpleBuilder/simpleBuilder.cpp
525 < src/applications/simpleBuilder/simpleBuilderCmd.c
525 > src/applications/simpleBuilder/simpleBuilderCmd.cpp
526   )
527  
528   set(THERMALIZERSOURCE
529   src/applications/thermalizer/thermalizer.cpp
530 < src/applications/thermalizer/thermalizerCmd.c
530 > src/applications/thermalizer/thermalizerCmd.cpp
531   )
532  
533   add_executable(Dump2XYZ ${DUMP2XYZSOURCE})
# Line 491 | Line 540 | target_link_libraries(nanoparticleBuilder openmd_singl
540   target_link_libraries(StaticProps openmd_single openmd_core openmd_single openmd_core)
541   add_executable(nanoparticleBuilder ${NANOPARTICLEBUILDERSOURCE})
542   target_link_libraries(nanoparticleBuilder openmd_single openmd_core openmd_single openmd_core)
543 + add_executable(nanorodBuilder ${NANORODBUILDERSOURCE})
544 + target_link_libraries(nanorodBuilder openmd_single openmd_core openmd_single openmd_core)
545 + add_executable(nanorod_pentBuilder ${NANOROD_PENTBUILDERSOURCE})
546 + target_link_libraries(nanorod_pentBuilder openmd_single openmd_core openmd_single openmd_core)
547   add_executable(randomBuilder ${RANDOMBUILDERSOURCE})
548   target_link_libraries(randomBuilder openmd_single openmd_core openmd_single openmd_core)
549   add_executable(simpleBuilder ${SIMPLEBUILDERSOURCE})
# Line 505 | Line 558 | src/applications/atom2md/openmdformat.cpp
558   )
559    add_executable(atom2md ${ATOM2MDSOURCE})
560    target_link_libraries(atom2md openmd_single openmd_core openmd_single openmd_core ${OPENBABEL2_LIBRARIES})
561 +  INSTALL(TARGETS atom2md RUNTIME DESTINATION bin
562 +          PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
563   ENDIF (OPENBABEL2_FOUND)
564  
565  
# Line 518 | Line 573 | src/applications/utilities/waterRotator
573   src/applications/utilities/principalAxisCalculator
574   src/applications/utilities/stat2visco
575   src/applications/utilities/waterRotator
576 + src/applications/utilities/waterReplacer
577   )
578  
579   IF(PYTHON_EXECUTABLE)
580     foreach(PY_FILE ${PY_FILES})
581 <      configure_file(${PY_FILE} "${EXECUTABLE_OUTPUT_PATH}"/${PY_FILE} @ONLY)
581 >      GET_FILENAME_COMPONENT(filename "${PY_FILE}" NAME)
582 >      CONFIGURE_FILE(${PY_FILE}
583 >                     "${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${filename}" @ONLY)
584 >      INSTALL(FILES "${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${filename}"
585 >              DESTINATION bin
586 >              PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
587     endforeach(PY_FILE)
527 – #INSTALL(FILES ${PY_FILES} DESTINATION ${EXECUTABLE_OUTPUT_PATH})
588   ENDIF(PYTHON_EXECUTABLE)
589  
590   set(PERL_FILES
# Line 534 | Line 594 | IF(PERL_FOUND)
594  
595   IF(PERL_FOUND)
596     foreach(PERL_FILE ${PERL_FILES})
597 <      configure_file(${PERL_FILE} "${EXECUTABLE_OUTPUT_PATH}"/${PERL_FILE} @ONLY)
597 >      GET_FILENAME_COMPONENT(filename "${PERL_FILE}" NAME)
598 >      configure_file(${PERL_FILE} "${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${filename}" @ONLY)
599 >      INSTALL(FILES "${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${filename}"
600 >              DESTINATION bin
601 >              PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
602 >
603     endforeach(PERL_FILE)
539 – #INSTALL(FILES ${PERL_FILES} DESTINATION ${EXECUTABLE_OUTPUT_PATH})
604   ENDIF(PERL_FOUND)
605 +
606 + INSTALL(FILES AUTHORS LICENSE README INSTALL DESTINATION .
607 +        PERMISSIONS OWNER_READ GROUP_READ WORLD_READ)
608 + INSTALL(TARGETS
609 +        openmd_core
610 +        openmd_single
611 +        openmd
612 +        Dump2XYZ
613 +        simpleBuilder
614 +        StaticProps
615 +        DynamicProps
616 +        randomBuilder
617 +        nanoparticleBuilder
618 +        thermalizer
619 +        Hydro
620 +  RUNTIME DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE
621 +  LIBRARY DESTINATION lib PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ
622 +  ARCHIVE DESTINATION lib PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ
623 + )
624 +
625 + install(DIRECTORY forceFields/  
626 +        DESTINATION forceFields
627 +        DIRECTORY_PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE
628 +        PATTERN ".svn" EXCLUDE
629 +        PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
630 + install(DIRECTORY samples/      
631 +        DESTINATION samples
632 +        DIRECTORY_PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE
633 +        PATTERN ".svn" EXCLUDE
634 +        PATTERN "*.dump" EXCLUDE
635 +        PATTERN "*.stat" EXCLUDE
636 +        PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
637 + INSTALL(FILES "${CMAKE_CURRENT_SOURCE_DIR}/doc/OpenMDmanual.pdf"
638 +        DESTINATION doc
639 +        PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
640 +
641 + message( STATUS)
642 + message( STATUS "========== OpenMD Build Information ==========")
643 + message( STATUS "Current revision ........... = ${SVN_REV}")
644 + message( STATUS "CMAKE_SYSTEM ............... = ${CMAKE_SYSTEM}")
645 + message( STATUS "==============================================")
646 + message( STATUS "CMAKE_BUILD_TYPE ........... = ${CMAKE_BUILD_TYPE}")
647 + message( STATUS "CMAKE_INSTALL_PREFIX ....... = ${CMAKE_INSTALL_PREFIX}")
648 + message( STATUS "Build as SINGLE_PRECISION .. = ${SINGLE_PRECISION}")
649 + message( STATUS "CMAKE_CXX_COMPILER ......... = ${CMAKE_CXX_COMPILER}")
650 + message( STATUS "MPI_CXX_COMPILER ........... = ${MPI_CXX_COMPILER}")
651 + message( STATUS "MPI_CXX_INCLUDE_PATH ....... = ${MPI_CXX_INCLUDE_PATH}")
652 + message( STATUS "MPI_CXX_LIBRARIES .......... = ${MPI_CXX_LIBRARIES}")
653 + message( STATUS "OPENBABEL2_ROOT ............ = ${OPENBABEL2_ROOT}")
654 + message( STATUS "OPENBABEL2_INCLUDE_DIR ..... = ${OPENBABEL2_INCLUDE_DIR}")
655 + message( STATUS "OPENBABEL2_LIBRARIES ....... = ${OPENBABEL2_LIBRARIES}")
656 + message( STATUS "QHULL_ROOT ................. = ${QHULL_ROOT}")
657 + message( STATUS "QHULL_INCLUDE_DIR .......... = ${QHULL_INCLUDE_DIR}")
658 + message( STATUS "QHULL_LIBRARIES ............ = ${QHULL_LIBRARIES}")
659 + message( STATUS "ZLIB_ROOT .................. = ${ZLIB_ROOT}")
660 + message( STATUS "ZLIB_INCLUDE_DIR ........... = ${ZLIB_INCLUDE_DIR}")
661 + message( STATUS "ZLIB_LIBRARIES ............. = ${ZLIB_LIBRARIES}")
662 + message( STATUS "FFTW3_ROOT ................. = ${FFTW3_ROOT}")
663 + message( STATUS "FFTW3_INCLUDE_DIR .......... = ${FFTW3_INCLUDE_DIR}")
664 + message( STATUS "FFTW3_LIBRARIES ............ = ${FFTW3_LIBRARIES}")
665 + message( STATUS "PERL_EXECUTABLE ............ = ${PERL_EXECUTABLE}")
666 + message( STATUS "PYTHON_EXECUTABLE .......... = ${PYTHON_EXECUTABLE}")
667 + message( STATUS "DOXYGEN_EXECUTABLE ......... = ${DOXYGEN_EXECUTABLE}")
668 + message( STATUS )
669 + message( STATUS "To override these options, add -D{OPTION_NAME}=... to the cmake command" )
670 + message( STATUS "Particularly useful defines are for:")
671 + message( STATUS )
672 + message( STATUS "  -DCMAKE_INSTALL_PREFIX=${CMAKE_INSTALL_PREFIX} (where OpenMD will be installed)")
673 + message( STATUS "       -DOPENBABEL2_ROOT=/path/to/openbabel")
674 + message( STATUS "            -DQHULL_ROOT=/path/to/qhull")
675 + message( STATUS "            -DFFTW3_ROOT=/path/to/fftw3")
676 + message( STATUS )
677 + message( STATUS "To build and install OpenMD, enter \"make\" and \"make install\"")
678 + message( STATUS )

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